RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 EIF4A2Q14240 407 aaKnown RBP9.89□□□□□ -0.83
GDNF-202ENST00000344622 LRRC59Q96AG4 307 aaKnown RBP9.89□□□□□ -0.83
GDNF-202ENST00000344622 PHACTR3Q96KR7 559 aa9.89□□□□□ -0.83
GDNF-202ENST00000344622 PLEKHF1Q96S99 279 aa9.89□□□□□ -0.83
GDNF-202ENST00000344622 USHBP1Q8N6Y0 703 aa9.89□□□□□ -0.83
GDNF-202ENST00000344622 SALL2Q9Y467 1007 aaPredicted RBP9.89□□□□□ -0.83
GDNF-202ENST00000344622 CDK12Q9NYV4 1490 aaPredicted RBP9.88□□□□□ -0.83
GDNF-202ENST00000344622 UBAP1LF5GYI3 381 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 NPHP3Q7Z494 1330 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 IQSEC2Q5JU85 1478 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 HOXC9P31274 260 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 BLMP54132 1417 aaPredicted RBP9.88□□□□□ -0.83
GDNF-202ENST00000344622 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 HMOX1P09601 288 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 PRKCSHP14314 528 aaPredicted RBP9.88□□□□□ -0.83
GDNF-202ENST00000344622 ARHGEF25Q86VW2 580 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 SBNO1A3KN83 1393 aa9.88□□□□□ -0.83
GDNF-202ENST00000344622 PLCH1Q4KWH8 1693 aa9.87□□□□□ -0.83
GDNF-202ENST00000344622 INSRP06213 1382 aa9.87□□□□□ -0.83
GDNF-202ENST00000344622 FAM83GA6ND36 823 aa9.86□□□□□ -0.83
GDNF-202ENST00000344622 HSPA1LP34931 641 aa9.86□□□□□ -0.83
GDNF-202ENST00000344622 NBPF6Q5VWK0 638 aa9.86□□□□□ -0.83
GDNF-202ENST00000344622 NBPF4Q96M43 638 aa9.86□□□□□ -0.83
GDNF-202ENST00000344622 GTF3C3Q9Y5Q9 886 aa9.86□□□□□ -0.83
GDNF-202ENST00000344622 RRP7AQ9Y3A4 280 aaKnown RBP9.86□□□□□ -0.83
GDNF-202ENST00000344622 NRAPQ86VF7 1730 aa9.85□□□□□ -0.83
GDNF-202ENST00000344622 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
GDNF-202ENST00000344622 ZBTB7CA1YPR0 619 aa9.85□□□□□ -0.83
GDNF-202ENST00000344622 EYA1Q99502 592 aa9.85□□□□□ -0.83
GDNF-202ENST00000344622 LTV1Q96GA3 475 aaPredicted RBP9.84□□□□□ -0.83
GDNF-202ENST00000344622 RSPH6AQ9H0K4 717 aa9.84□□□□□ -0.83
GDNF-202ENST00000344622 HNRNPUQ00839 825 aaKnown RBP eCLIP9.83□□□□□ -0.84
GDNF-202ENST00000344622 APAF1O14727 1248 aa9.82□□□□□ -0.84
GDNF-202ENST00000344622 CENPBP07199 599 aaPredicted RBP9.82□□□□□ -0.84
GDNF-202ENST00000344622 ZNF521Q96K83 1311 aa9.82□□□□□ -0.84
GDNF-202ENST00000344622 COL5A2P05997 1499 aaPredicted RBP9.82□□□□□ -0.84
GDNF-202ENST00000344622 FLT4P35916 1363 aa9.82□□□□□ -0.84
GDNF-202ENST00000344622 ERBB3P21860 1342 aa9.82□□□□□ -0.84
GDNF-202ENST00000344622 MEGF6O75095 1541 aa9.81□□□□□ -0.84
GDNF-202ENST00000344622 U2SURPO15042 1029 aaKnown RBP9.81□□□□□ -0.84
GDNF-202ENST00000344622 THUMPD2Q9BTF0 503 aaKnown RBP9.81□□□□□ -0.84
GDNF-202ENST00000344622 IP6K1Q92551 441 aa9.81□□□□□ -0.84
GDNF-202ENST00000344622 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
GDNF-202ENST00000344622 NCAPD2Q15021 1401 aa9.81□□□□□ -0.84
GDNF-202ENST00000344622 KDRP35968 1356 aa9.8□□□□□ -0.84
GDNF-202ENST00000344622 IGSF1Q8N6C5 1336 aa9.8□□□□□ -0.84
GDNF-202ENST00000344622 DIAPH1O60610 1272 aaKnown RBP9.8□□□□□ -0.84
GDNF-202ENST00000344622 TOM1O60784 492 aa9.8□□□□□ -0.84
GDNF-202ENST00000344622 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
GDNF-202ENST00000344622 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
GDNF-202ENST00000344622 DCTN1Q14203 1278 aa9.8□□□□□ -0.84
GDNF-202ENST00000344622 SULT6B1Q6IMI4 303 aa9.8□□□□□ -0.84
GDNF-202ENST00000344622 ADAMTS2O95450 1211 aa9.8□□□□□ -0.84
GDNF-202ENST00000344622 NEUROD2Q15784 382 aa9.8□□□□□ -0.84
GDNF-202ENST00000344622 WNK3Q9BYP7 1800 aa9.8□□□□□ -0.84
GDNF-202ENST00000344622 CPDO75976 1380 aa9.79□□□□□ -0.84
GDNF-202ENST00000344622 PRKAR2BP31323 418 aa9.79□□□□□ -0.84
GDNF-202ENST00000344622 LARP1Q6PKG0 1096 aaKnown RBP9.79□□□□□ -0.84
GDNF-202ENST00000344622 PHF23Q9BUL5 403 aaPredicted RBP9.79□□□□□ -0.84
GDNF-202ENST00000344622 BCL9LQ86UU0 1499 aa9.79□□□□□ -0.84
GDNF-202ENST00000344622 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
GDNF-202ENST00000344622 NUTM2BA6NNL0 878 aaPredicted RBP9.78□□□□□ -0.84
GDNF-202ENST00000344622 NUTM2EB1AL46 878 aaPredicted RBP9.78□□□□□ -0.84
GDNF-202ENST00000344622 NUTM2AQ8IVF1 878 aaPredicted RBP9.78□□□□□ -0.84
GDNF-202ENST00000344622 TCP11L2Q8N4U5 519 aa9.78□□□□□ -0.84
GDNF-202ENST00000344622 ARHGEF10O15013 1369 aa9.78□□□□□ -0.84
GDNF-202ENST00000344622 AMPHP49418 695 aa9.78□□□□□ -0.84
GDNF-202ENST00000344622 ANKRD24Q8TF21 1146 aa9.78□□□□□ -0.84
GDNF-202ENST00000344622 COL14A1Q05707 1796 aaKnown RBP9.77□□□□□ -0.84
GDNF-202ENST00000344622 BTG4Q9NY30 223 aa9.77□□□□□ -0.85
GDNF-202ENST00000344622 MTHFSDQ2M296 383 aaKnown RBP9.77□□□□□ -0.85
GDNF-202ENST00000344622 PKD1L3Q7Z443 1732 aa9.76□□□□□ -0.85
GDNF-202ENST00000344622 SIPA1L3O60292 1781 aaPredicted RBP9.76□□□□□ -0.85
GDNF-202ENST00000344622 IRX6P78412 446 aaPredicted RBP9.76□□□□□ -0.85
GDNF-202ENST00000344622 SLIT2O94813 1529 aa9.76□□□□□ -0.85
GDNF-202ENST00000344622 USP35Q9P2H5 1018 aa9.76□□□□□ -0.85
GDNF-202ENST00000344622 LRRC37A3O60309 1634 aa9.75□□□□□ -0.85
GDNF-202ENST00000344622 KCNH5Q8NCM2 988 aa9.75□□□□□ -0.85
GDNF-202ENST00000344622 RTL1A6NKG5 1358 aa9.75□□□□□ -0.85
GDNF-202ENST00000344622 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
GDNF-202ENST00000344622 ADAMTS7Q9UKP4 1686 aa9.74□□□□□ -0.85
GDNF-202ENST00000344622 TMPOP42166 694 aaKnown RBP9.74□□□□□ -0.85
GDNF-202ENST00000344622 ZBED9Q6R2W3 1325 aa9.74□□□□□ -0.85
GDNF-202ENST00000344622 WDR43Q15061 677 aaKnown RBP eCLIP9.74□□□□□ -0.85
GDNF-202ENST00000344622 MCM10Q7L590 875 aa9.74□□□□□ -0.85
GDNF-202ENST00000344622 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
GDNF-202ENST00000344622 GLI3P10071 1580 aa9.74□□□□□ -0.85
GDNF-202ENST00000344622 NWD2Q9ULI1 1742 aa9.74□□□□□ -0.85
GDNF-202ENST00000344622 PRDM11Q9NQV5 511 aa9.74□□□□□ -0.85
GDNF-202ENST00000344622 KRT24Q2M2I5 525 aa9.73□□□□□ -0.85
GDNF-202ENST00000344622 BRWD3Q6RI45 1802 aa9.73□□□□□ -0.85
GDNF-202ENST00000344622 LGR6Q9HBX8 967 aa9.73□□□□□ -0.85
GDNF-202ENST00000344622 SCN11AQ9UI33 1791 aa9.73□□□□□ -0.85
GDNF-202ENST00000344622 MIS18AQ9NYP9 233 aa9.73□□□□□ -0.85
GDNF-202ENST00000344622 RGS17Q9UGC6 210 aaPredicted RBP9.72□□□□□ -0.85
GDNF-202ENST00000344622 KIF24Q5T7B8 1368 aa9.72□□□□□ -0.85
GDNF-202ENST00000344622 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
GDNF-202ENST00000344622 RUNDC1Q96C34 613 aa9.72□□□□□ -0.85
GDNF-202ENST00000344622 FCHSD2O94868 740 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms