RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 CCDC7Q96M83 1385 aa25.82■■□□□ 1.72
CDHR4-201ENST00000343366 C11orf95C9JLR9 678 aaPredicted RBP25.81■■□□□ 1.72
CDHR4-201ENST00000343366 ZC3H6P61129 1189 aaKnown RBP25.81■■□□□ 1.72
CDHR4-201ENST00000343366 USP19O94966 1318 aa25.81■■□□□ 1.72
CDHR4-201ENST00000343366 USP6P35125 1406 aa25.8■■□□□ 1.72
CDHR4-201ENST00000343366 CASZ1Q86V15 1759 aa25.8■■□□□ 1.72
CDHR4-201ENST00000343366 KTN1Q86UP2 1357 aaKnown RBP25.8■■□□□ 1.72
CDHR4-201ENST00000343366 MON2Q7Z3U7 1717 aa25.8■■□□□ 1.72
CDHR4-201ENST00000343366 YY1P25490 414 aa25.78■■□□□ 1.72
CDHR4-201ENST00000343366 LARP1Q6PKG0 1096 aaKnown RBP25.78■■□□□ 1.72
CDHR4-201ENST00000343366 CD163L1Q9NR16 1453 aa25.78■■□□□ 1.72
CDHR4-201ENST00000343366 WASHC2AQ641Q2 1341 aa25.77■■□□□ 1.72
CDHR4-201ENST00000343366 EDC4Q6P2E9 1401 aaKnown RBP25.77■■□□□ 1.72
CDHR4-201ENST00000343366 UTRNP46939 3433 aa25.76■■□□□ 1.71
CDHR4-201ENST00000343366 TCP11L2Q8N4U5 519 aa25.76■■□□□ 1.71
CDHR4-201ENST00000343366 USP35Q9P2H5 1018 aa25.76■■□□□ 1.71
CDHR4-201ENST00000343366 TTC21AQ8NDW8 1320 aa25.76■■□□□ 1.71
CDHR4-201ENST00000343366 A0A1W2PP64 1363 aa25.76■■□□□ 1.71
CDHR4-201ENST00000343366 COL5A2P05997 1499 aaPredicted RBP25.76■■□□□ 1.71
CDHR4-201ENST00000343366 LRRC37A3O60309 1634 aa25.75■■□□□ 1.71
CDHR4-201ENST00000343366 PDE3BQ13370 1112 aa25.75■■□□□ 1.71
CDHR4-201ENST00000343366 NUTM2GQ5VZR2 741 aa25.74■■□□□ 1.71
CDHR4-201ENST00000343366 THRAP3Q9Y2W1 955 aaKnown RBP25.74■■□□□ 1.71
CDHR4-201ENST00000343366 WNK3Q9BYP7 1800 aa25.73■■□□□ 1.71
CDHR4-201ENST00000343366 NBPF14Q5TI25 921 aa25.73■■□□□ 1.71
CDHR4-201ENST00000343366 SPON1Q9HCB6 807 aa25.72■■□□□ 1.71
CDHR4-201ENST00000343366 ZNF316A6NFI3 1004 aaPredicted RBP25.71■■□□□ 1.71
CDHR4-201ENST00000343366 KCNQ2O43526 872 aa25.71■■□□□ 1.71
CDHR4-201ENST00000343366 TTC21BQ7Z4L5 1316 aa25.7■■□□□ 1.71
CDHR4-201ENST00000343366 COL18A1P39060 1754 aa25.7■■□□□ 1.7
CDHR4-201ENST00000343366 EVA1CP58658 441 aa25.7■■□□□ 1.7
CDHR4-201ENST00000343366 PANK3Q9H999 370 aa25.68■■□□□ 1.7
CDHR4-201ENST00000343366 OVOS2A0A0G2JMS6 1433 aa25.68■■□□□ 1.7
CDHR4-201ENST00000343366 OVOS2A0A0J9YW53 1432 aa25.68■■□□□ 1.7
CDHR4-201ENST00000343366 CRB1P82279 1406 aa25.68■■□□□ 1.7
CDHR4-201ENST00000343366 OVOS2Q6IE36 1432 aa25.68■■□□□ 1.7
CDHR4-201ENST00000343366 ABTB2Q8N961 1025 aa25.67■■□□□ 1.7
CDHR4-201ENST00000343366 SLIT3O75094 1523 aa25.67■■□□□ 1.7
CDHR4-201ENST00000343366 PLSCR1O15162 318 aa25.66■■□□□ 1.7
CDHR4-201ENST00000343366 NLRP13Q86W25 1043 aa25.66■■□□□ 1.7
CDHR4-201ENST00000343366 GCP02774 474 aa25.65■■□□□ 1.7
CDHR4-201ENST00000343366 ANO8Q9HCE9 1232 aaPredicted RBP25.65■■□□□ 1.7
CDHR4-201ENST00000343366 CGNL1Q0VF96 1302 aa25.64■■□□□ 1.7
CDHR4-201ENST00000343366 BCL9O00512 1426 aa25.64■■□□□ 1.7
CDHR4-201ENST00000343366 KNSTRNQ9Y448 316 aa25.63■■□□□ 1.69
CDHR4-201ENST00000343366 NSD3Q9BZ95 1437 aa25.63■■□□□ 1.69
CDHR4-201ENST00000343366 USP54Q70EL1 1684 aa25.62■■□□□ 1.69
CDHR4-201ENST00000343366 AATKQ6ZMQ8 1374 aa25.61■■□□□ 1.69
CDHR4-201ENST00000343366 USP31Q70CQ4 1352 aa25.61■■□□□ 1.69
CDHR4-201ENST00000343366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.61■■□□□ 1.69
CDHR4-201ENST00000343366 CARD14Q9BXL6 1004 aa25.61■■□□□ 1.69
CDHR4-201ENST00000343366 PPP1R1BQ9UD71 204 aaPredicted RBP25.61■■□□□ 1.69
CDHR4-201ENST00000343366 PIK3C2AO00443 1686 aa25.61■■□□□ 1.69
CDHR4-201ENST00000343366 KIF20BQ96Q89 1820 aa25.6■■□□□ 1.69
CDHR4-201ENST00000343366 NSD2O96028 1365 aa25.6■■□□□ 1.69
CDHR4-201ENST00000343366 PTF1AQ7RTS3 328 aa25.6■■□□□ 1.69
CDHR4-201ENST00000343366 PROM2Q8N271 834 aa25.6■■□□□ 1.69
CDHR4-201ENST00000343366 NLRP6P59044 892 aa25.59■■□□□ 1.69
CDHR4-201ENST00000343366 PDGFDQ9GZP0 370 aaPredicted RBP25.59■■□□□ 1.69
CDHR4-201ENST00000343366 PTGER2P43116 358 aa25.56■■□□□ 1.68
CDHR4-201ENST00000343366 KCNH5Q8NCM2 988 aa25.56■■□□□ 1.68
CDHR4-201ENST00000343366 COG3Q96JB2 828 aa25.56■■□□□ 1.68
CDHR4-201ENST00000343366 BCL11BQ9C0K0 894 aaPredicted RBP25.56■■□□□ 1.68
CDHR4-201ENST00000343366 RGPD5Q99666 1765 aa25.55■■□□□ 1.68
CDHR4-201ENST00000343366 FYB1O15117 783 aa25.55■■□□□ 1.68
CDHR4-201ENST00000343366 PER1O15534 1290 aaPredicted RBP25.55■■□□□ 1.68
CDHR4-201ENST00000343366 NPC1L1Q9UHC9 1359 aa25.55■■□□□ 1.68
CDHR4-201ENST00000343366 NME9Q86XW9 330 aa25.54■■□□□ 1.68
CDHR4-201ENST00000343366 ANKRD26Q9UPS8 1709 aa25.53■■□□□ 1.68
CDHR4-201ENST00000343366 CHD4Q14839 1912 aa25.53■■□□□ 1.68
CDHR4-201ENST00000343366 DDB1Q16531 1140 aa25.52■■□□□ 1.68
CDHR4-201ENST00000343366 MARCH10Q8NA82 808 aaPredicted RBP25.52■■□□□ 1.68
CDHR4-201ENST00000343366 DDX10Q13206 875 aaKnown RBP25.5■■□□□ 1.67
CDHR4-201ENST00000343366 WDR17Q8IZU2 1322 aa25.5■■□□□ 1.67
CDHR4-201ENST00000343366 AXIN2Q9Y2T1 843 aa25.5■■□□□ 1.67
CDHR4-201ENST00000343366 PAPPAQ13219 1627 aa25.48■■□□□ 1.67
CDHR4-201ENST00000343366 DCAF8L1A6NGE4 600 aa25.48■■□□□ 1.67
CDHR4-201ENST00000343366 SGIP1Q9BQI5 828 aa25.48■■□□□ 1.67
CDHR4-201ENST00000343366 AMER1Q5JTC6 1135 aaPredicted RBP25.47■■□□□ 1.67
CDHR4-201ENST00000343366 ZNF784Q8NCA9 323 aaPredicted RBP25.47■■□□□ 1.67
CDHR4-201ENST00000343366 GGNBP2Q9H3C7 697 aa25.47■■□□□ 1.67
CDHR4-201ENST00000343366 NHSQ6T4R5 1651 aa25.46■■□□□ 1.67
CDHR4-201ENST00000343366 ZBTB7AO95365 584 aa25.46■■□□□ 1.67
CDHR4-201ENST00000343366 NFAT5O94916 1531 aa25.44■■□□□ 1.66
CDHR4-201ENST00000343366 TOM1L2Q6ZVM7 507 aa25.44■■□□□ 1.66
CDHR4-201ENST00000343366 CDCA7Q9BWT1 371 aaPredicted RBP25.44■■□□□ 1.66
CDHR4-201ENST00000343366 TXNRD1Q16881 649 aa25.43■■□□□ 1.66
CDHR4-201ENST00000343366 ARHGEF25Q86VW2 580 aa25.43■■□□□ 1.66
CDHR4-201ENST00000343366 GOLGB1Q14789 3259 aaKnown RBP25.43■■□□□ 1.66
CDHR4-201ENST00000343366 ABCC6O95255 1503 aa25.42■■□□□ 1.66
CDHR4-201ENST00000343366 MORC1Q86VD1 984 aa25.42■■□□□ 1.66
CDHR4-201ENST00000343366 SYT17Q9BSW7 474 aa25.42■■□□□ 1.66
CDHR4-201ENST00000343366 SLC15A2Q16348 729 aa25.41■■□□□ 1.66
CDHR4-201ENST00000343366 CARD10Q9BWT7 1032 aa25.41■■□□□ 1.66
CDHR4-201ENST00000343366 TNS2Q63HR2 1409 aa25.4■■□□□ 1.66
CDHR4-201ENST00000343366 FHDC1Q9C0D6 1143 aaPredicted RBP25.4■■□□□ 1.66
CDHR4-201ENST00000343366 COL24A1Q17RW2 1714 aa25.4■■□□□ 1.66
CDHR4-201ENST00000343366 ATF5Q9Y2D1 282 aaPredicted RBP25.39■■□□□ 1.66
CDHR4-201ENST00000343366 KIF24Q5T7B8 1368 aa25.39■■□□□ 1.65
CDHR4-201ENST00000343366 MAP3K5Q99683 1374 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms