RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 HSP90AB2PQ58FF8 381 aa21.82■■□□□ 1.08
SNED1-202ENST00000342631 FAM9BQ8IZU0 186 aa21.82■■□□□ 1.08
SNED1-202ENST00000342631 KIAA0232Q92628 1395 aa21.82■■□□□ 1.08
SNED1-202ENST00000342631 IL13P35225 146 aa21.81■■□□□ 1.08
SNED1-202ENST00000342631 COL18A1P39060 1754 aa21.8■■□□□ 1.08
SNED1-202ENST00000342631 HSPA1LP34931 641 aa21.79■■□□□ 1.08
SNED1-202ENST00000342631 EIF4A2Q14240 407 aaKnown RBP21.79■■□□□ 1.08
SNED1-202ENST00000342631 PRDM11Q9NQV5 511 aa21.79■■□□□ 1.08
SNED1-202ENST00000342631 SPATA31A6Q5VVP1 1343 aa21.78■■□□□ 1.08
SNED1-202ENST00000342631 ADAMTS8Q9UP79 889 aa21.78■■□□□ 1.08
SNED1-202ENST00000342631 ZBTB7CA1YPR0 619 aa21.78■■□□□ 1.08
SNED1-202ENST00000342631 U2SURPO15042 1029 aaKnown RBP21.76■■□□□ 1.07
SNED1-202ENST00000342631 U2AF1L5P0DN76 240 aaPredicted RBP21.76■■□□□ 1.07
SNED1-202ENST00000342631 U2AF1Q01081 240 aaKnown RBP eCLIP21.76■■□□□ 1.07
SNED1-202ENST00000342631 PNNQ9H307 717 aaKnown RBP21.76■■□□□ 1.07
SNED1-202ENST00000342631 LMO7Q8WWI1 1683 aa21.75■■□□□ 1.07
SNED1-202ENST00000342631 COL14A1Q05707 1796 aaKnown RBP21.75■■□□□ 1.07
SNED1-202ENST00000342631 RGPD1P0DJD0 1748 aa21.75■■□□□ 1.07
SNED1-202ENST00000342631 AXIN2Q9Y2T1 843 aa21.74■■□□□ 1.07
SNED1-202ENST00000342631 RGPD5Q99666 1765 aa21.74■■□□□ 1.07
SNED1-202ENST00000342631 FCHSD2O94868 740 aa21.73■■□□□ 1.07
SNED1-202ENST00000342631 FAM208AQ9UK61 1670 aaKnown RBP21.73■■□□□ 1.07
SNED1-202ENST00000342631 CHRNA2Q15822 529 aa21.72■■□□□ 1.07
SNED1-202ENST00000342631 ERBB3P21860 1342 aa21.72■■□□□ 1.07
SNED1-202ENST00000342631 ANKRD24Q8TF21 1146 aa21.72■■□□□ 1.07
SNED1-202ENST00000342631 FBXO41Q8TF61 875 aa21.72■■□□□ 1.07
SNED1-202ENST00000342631 IGSF1Q8N6C5 1336 aa21.71■■□□□ 1.07
SNED1-202ENST00000342631 FAM83GA6ND36 823 aa21.71■■□□□ 1.07
SNED1-202ENST00000342631 CAMTA1Q9Y6Y1 1673 aa21.7■■□□□ 1.06
SNED1-202ENST00000342631 LTV1Q96GA3 475 aaPredicted RBP21.69■■□□□ 1.06
SNED1-202ENST00000342631 EYA1Q99502 592 aa21.69■■□□□ 1.06
SNED1-202ENST00000342631 KDRP35968 1356 aa21.69■■□□□ 1.06
SNED1-202ENST00000342631 RUNDC1Q96C34 613 aa21.68■■□□□ 1.06
SNED1-202ENST00000342631 NUTM2BA6NNL0 878 aaPredicted RBP21.68■■□□□ 1.06
SNED1-202ENST00000342631 NUTM2EB1AL46 878 aaPredicted RBP21.68■■□□□ 1.06
SNED1-202ENST00000342631 NUTM2AQ8IVF1 878 aaPredicted RBP21.68■■□□□ 1.06
SNED1-202ENST00000342631 COL5A2P05997 1499 aaPredicted RBP21.68■■□□□ 1.06
SNED1-202ENST00000342631 RSPH6AQ9H0K4 717 aa21.67■■□□□ 1.06
SNED1-202ENST00000342631 NCAPD2Q15021 1401 aa21.67■■□□□ 1.06
SNED1-202ENST00000342631 ADAMTS2O95450 1211 aa21.66■■□□□ 1.06
SNED1-202ENST00000342631 NEFMP07197 916 aa21.66■■□□□ 1.06
SNED1-202ENST00000342631 SULT6B1Q6IMI4 303 aa21.66■■□□□ 1.06
SNED1-202ENST00000342631 NGEFQ8N5V2 710 aa21.66■■□□□ 1.06
SNED1-202ENST00000342631 NWD2Q9ULI1 1742 aa21.66■■□□□ 1.06
SNED1-202ENST00000342631 WDR17Q8IZU2 1322 aa21.66■■□□□ 1.06
SNED1-202ENST00000342631 CSB-PGBD3P0DP91 1061 aa21.65■■□□□ 1.06
SNED1-202ENST00000342631 NBPF6Q5VWK0 638 aa21.65■■□□□ 1.06
SNED1-202ENST00000342631 NBPF4Q96M43 638 aa21.65■■□□□ 1.06
SNED1-202ENST00000342631 PLEKHF1Q96S99 279 aa21.65■■□□□ 1.06
SNED1-202ENST00000342631 PLCH1Q4KWH8 1693 aa21.64■■□□□ 1.06
SNED1-202ENST00000342631 HMOX1P09601 288 aa21.64■■□□□ 1.05
SNED1-202ENST00000342631 BTG4Q9NY30 223 aa21.64■■□□□ 1.05
SNED1-202ENST00000342631 RGPD2P0DJD1 1756 aa21.63■■□□□ 1.05
SNED1-202ENST00000342631 EVA1CP58658 441 aa21.63■■□□□ 1.05
SNED1-202ENST00000342631 NCBP3Q53F19 620 aaKnown RBP21.63■■□□□ 1.05
SNED1-202ENST00000342631 PRKAR2BP31323 418 aa21.63■■□□□ 1.05
SNED1-202ENST00000342631 HNRNPUQ00839 825 aaKnown RBP eCLIP21.63■■□□□ 1.05
SNED1-202ENST00000342631 MAPK8IP3Q9UPT6 1336 aa21.63■■□□□ 1.05
SNED1-202ENST00000342631 PLEKHG2Q9H7P9 1386 aa21.62■■□□□ 1.05
SNED1-202ENST00000342631 SLIT2O94813 1529 aa21.62■■□□□ 1.05
SNED1-202ENST00000342631 CCDC146Q8IYE0 955 aa21.62■■□□□ 1.05
SNED1-202ENST00000342631 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
SNED1-202ENST00000342631 LRP6O75581 1613 aa21.61■■□□□ 1.05
SNED1-202ENST00000342631 NLRP2Q9NX02 1062 aa21.61■■□□□ 1.05
SNED1-202ENST00000342631 AEBP1Q8IUX7 1158 aa21.61■■□□□ 1.05
SNED1-202ENST00000342631 NRAPQ86VF7 1730 aa21.59■■□□□ 1.05
SNED1-202ENST00000342631 TOM1L2Q6ZVM7 507 aa21.59■■□□□ 1.05
SNED1-202ENST00000342631 CARD10Q9BWT7 1032 aa21.59■■□□□ 1.05
SNED1-202ENST00000342631 CRB1P82279 1406 aa21.59■■□□□ 1.05
SNED1-202ENST00000342631 TCP11L2Q8N4U5 519 aa21.59■■□□□ 1.05
SNED1-202ENST00000342631 APAF1O14727 1248 aa21.58■■□□□ 1.04
SNED1-202ENST00000342631 FNBP4Q8N3X1 1017 aaPredicted RBP21.58■■□□□ 1.04
SNED1-202ENST00000342631 STRN4Q9NRL3 753 aa21.58■■□□□ 1.04
SNED1-202ENST00000342631 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
SNED1-202ENST00000342631 NGLY1Q96IV0 654 aa21.57■■□□□ 1.04
SNED1-202ENST00000342631 MEX3CQ5U5Q3 659 aaKnown RBP21.57■■□□□ 1.04
SNED1-202ENST00000342631 LARP1Q6PKG0 1096 aaKnown RBP21.56■■□□□ 1.04
SNED1-202ENST00000342631 USHBP1Q8N6Y0 703 aa21.56■■□□□ 1.04
SNED1-202ENST00000342631 C8orf37Q96NL8 207 aa21.56■■□□□ 1.04
SNED1-202ENST00000342631 PHACTR3Q96KR7 559 aa21.55■■□□□ 1.04
SNED1-202ENST00000342631 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.55■■□□□ 1.04
SNED1-202ENST00000342631 TMPOP42166 694 aaKnown RBP21.54■■□□□ 1.04
SNED1-202ENST00000342631 UNC5CLQ8IV45 518 aa21.54■■□□□ 1.04
SNED1-202ENST00000342631 RAPGEF4Q8WZA2 1011 aa21.54■■□□□ 1.04
SNED1-202ENST00000342631 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
SNED1-202ENST00000342631 CCDC27Q2M243 656 aa21.53■■□□□ 1.04
SNED1-202ENST00000342631 AMOTQ4VCS5 1084 aa21.53■■□□□ 1.04
SNED1-202ENST00000342631 GAS2L2Q8NHY3 880 aa21.53■■□□□ 1.04
SNED1-202ENST00000342631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNED1-202ENST00000342631 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.03
SNED1-202ENST00000342631 TATP17735 454 aaPredicted RBP21.51■■□□□ 1.03
SNED1-202ENST00000342631 THRAP3Q9Y2W1 955 aaKnown RBP21.51■■□□□ 1.03
SNED1-202ENST00000342631 PLEKHO1Q53GL0 409 aaPredicted RBP21.51■■□□□ 1.03
SNED1-202ENST00000342631 PARP4Q9UKK3 1724 aaKnown RBP21.51■■□□□ 1.03
SNED1-202ENST00000342631 LMOD3Q0VAK6 560 aa21.5■■□□□ 1.03
SNED1-202ENST00000342631 RIPK4P57078 832 aa21.49■■□□□ 1.03
SNED1-202ENST00000342631 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
SNED1-202ENST00000342631 VPS72Q15906 364 aa21.49■■□□□ 1.03
SNED1-202ENST00000342631 USP21Q9UK80 565 aa21.49■■□□□ 1.03
SNED1-202ENST00000342631 IL2RBP14784 551 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms