RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 NDUFV2P19404 249 aa9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 CEBPAP49715 358 aaPredicted RBP9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 USP46P62068 366 aa9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 FBXO31Q5XUX0 539 aaPredicted RBP9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 SAMD7Q7Z3H4 446 aa9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 ZFRQ96KR1 1074 aaKnown RBP9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 PRM3Q9NNZ6 103 aa9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 SUPT6HQ7KZ85 1726 aaKnown RBP9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 SPAG9O60271 1321 aaKnown RBP9.53□□□□□ -0.88
RNFT1P3-201ENST00000340898 MAP3K1Q13233 1512 aa9.52□□□□□ -0.88
RNFT1P3-201ENST00000340898 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
RNFT1P3-201ENST00000340898 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
RNFT1P3-201ENST00000340898 LILRB3O75022 631 aa9.52□□□□□ -0.89
RNFT1P3-201ENST00000340898 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.89
RNFT1P3-201ENST00000340898 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
RNFT1P3-201ENST00000340898 WWC1Q8IX03 1113 aa9.52□□□□□ -0.89
RNFT1P3-201ENST00000340898 SOCS7O14512 581 aa9.51□□□□□ -0.89
RNFT1P3-201ENST00000340898 RNF40O75150 1001 aa9.51□□□□□ -0.89
RNFT1P3-201ENST00000340898 GCGRP47871 477 aa9.51□□□□□ -0.89
RNFT1P3-201ENST00000340898 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
RNFT1P3-201ENST00000340898 LRCH3Q96II8 777 aa9.51□□□□□ -0.89
RNFT1P3-201ENST00000340898 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
RNFT1P3-201ENST00000340898 QPCTQ16769 361 aa9.5□□□□□ -0.89
RNFT1P3-201ENST00000340898 CCDC97Q96F63 343 aaPredicted RBP9.5□□□□□ -0.89
RNFT1P3-201ENST00000340898 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.5□□□□□ -0.89
RNFT1P3-201ENST00000340898 ZNF330Q9Y3S2 320 aaPredicted RBP9.5□□□□□ -0.89
RNFT1P3-201ENST00000340898 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
RNFT1P3-201ENST00000340898 PLEKHH2Q8IVE3 1493 aa9.5□□□□□ -0.89
RNFT1P3-201ENST00000340898 FER1L4A9Z1Z3 1794 aa9.5□□□□□ -0.89
RNFT1P3-201ENST00000340898 REREQ9P2R6 1566 aa9.5□□□□□ -0.89
RNFT1P3-201ENST00000340898 CAMSAP2Q08AD1 1489 aa9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 HRO43593 1189 aa9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 AP1G2O75843 785 aa9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 SLC10A3P09131 477 aa9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 MTMR14Q8NCE2 650 aa9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 ANKK1Q8NFD2 765 aa9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 ATP7AQ04656 1500 aa9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 INO80Q9ULG1 1556 aaPredicted RBP9.49□□□□□ -0.89
RNFT1P3-201ENST00000340898 AGLP35573 1532 aa9.48□□□□□ -0.89
RNFT1P3-201ENST00000340898 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
RNFT1P3-201ENST00000340898 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
RNFT1P3-201ENST00000340898 HOXA2O43364 376 aa9.47□□□□□ -0.89
RNFT1P3-201ENST00000340898 FDX1P10109 184 aa9.47□□□□□ -0.89
RNFT1P3-201ENST00000340898 HSPA2P54652 639 aa9.47□□□□□ -0.89
RNFT1P3-201ENST00000340898 KMT5BQ4FZB7 885 aa9.47□□□□□ -0.89
RNFT1P3-201ENST00000340898 GDPD2Q9HCC8 539 aa9.47□□□□□ -0.89
RNFT1P3-201ENST00000340898 A2MP01023 1474 aa9.47□□□□□ -0.89
RNFT1P3-201ENST00000340898 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.9
RNFT1P3-201ENST00000340898 RTEL1-TNFRSF6BF6WH68 1400 aa9.46□□□□□ -0.9
RNFT1P3-201ENST00000340898 MYOM3Q5VTT5 1437 aa9.46□□□□□ -0.9
RNFT1P3-201ENST00000340898 LMTK3Q96Q04 1460 aa9.46□□□□□ -0.9
RNFT1P3-201ENST00000340898 HRCP23327 699 aa9.45□□□□□ -0.9
RNFT1P3-201ENST00000340898 GGT6Q6P531 493 aa9.45□□□□□ -0.9
RNFT1P3-201ENST00000340898 PPARGC1BQ86YN6 1023 aaKnown RBP9.45□□□□□ -0.9
RNFT1P3-201ENST00000340898 PRR14Q9BWN1 585 aa9.45□□□□□ -0.9
RNFT1P3-201ENST00000340898 CCDC141Q6ZP82 1450 aa9.45□□□□□ -0.9
RNFT1P3-201ENST00000340898 PLXNC1O60486 1568 aa9.45□□□□□ -0.9
RNFT1P3-201ENST00000340898 CFHP08603 1231 aa9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 USP17L8P0C7I0 530 aa9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 PPP4CP60510 307 aa9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 WNT2BQ93097 391 aa9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 DHX29Q7Z478 1369 aaKnown RBP9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 MIA2Q96PC5 1412 aa9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 ARHGEF5Q12774 1597 aa9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 C3P01024 1663 aa9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 ADGBQ8N7X0 1667 aa9.44□□□□□ -0.9
RNFT1P3-201ENST00000340898 TSPY4P0CV99 314 aa9.43□□□□□ -0.9
RNFT1P3-201ENST00000340898 TSPY10P0CW01 314 aa9.43□□□□□ -0.9
RNFT1P3-201ENST00000340898 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
RNFT1P3-201ENST00000340898 ABL2P42684 1182 aa9.43□□□□□ -0.9
RNFT1P3-201ENST00000340898 ZMYM3Q14202 1370 aa9.42□□□□□ -0.9
RNFT1P3-201ENST00000340898 SOWAHBA6NEL2 793 aa9.42□□□□□ -0.9
RNFT1P3-201ENST00000340898 KIF3BO15066 747 aa9.42□□□□□ -0.9
RNFT1P3-201ENST00000340898 ATP6V1AP38606 617 aa9.42□□□□□ -0.9
RNFT1P3-201ENST00000340898 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
RNFT1P3-201ENST00000340898 ABCC5O15440 1437 aa9.41□□□□□ -0.9
RNFT1P3-201ENST00000340898 TSR3Q9UJK0 312 aaKnown RBP9.41□□□□□ -0.9
RNFT1P3-201ENST00000340898 PTPN23Q9H3S7 1636 aa9.41□□□□□ -0.9
RNFT1P3-201ENST00000340898 FGD6Q6ZV73 1430 aa9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 CLTCQ00610 1675 aaKnown RBP9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 MTMR2Q13614 643 aa9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 ESF1Q9H501 851 aaKnown RBP9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 PCDHGC3Q9UN70 934 aa9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 TBC1D2BQ9UPU7 963 aa9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 HPS5Q9UPZ3 1129 aa9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 SETD1BQ9UPS6 1966 aaKnown RBP9.4□□□□□ -0.9
RNFT1P3-201ENST00000340898 MAST1Q9Y2H9 1570 aa9.39□□□□□ -0.91
RNFT1P3-201ENST00000340898 FUT2Q10981 343 aa9.39□□□□□ -0.91
RNFT1P3-201ENST00000340898 SPNS2Q8IVW8 549 aa9.39□□□□□ -0.91
RNFT1P3-201ENST00000340898 CHIC2Q9UKJ5 165 aa9.39□□□□□ -0.91
RNFT1P3-201ENST00000340898 NDUFB9Q9Y6M9 179 aa9.39□□□□□ -0.91
RNFT1P3-201ENST00000340898 TCOF1Q13428 1488 aaKnown RBP9.39□□□□□ -0.91
RNFT1P3-201ENST00000340898 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
RNFT1P3-201ENST00000340898 GUCA2AQ02747 115 aa9.38□□□□□ -0.91
RNFT1P3-201ENST00000340898 TRIM26Q12899 539 aaPredicted RBP9.38□□□□□ -0.91
RNFT1P3-201ENST00000340898 CALR3Q96L12 384 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms