RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 STRN4Q9NRL3 753 aa21.34■■□□□ 1.01
PRKN-201ENST00000338468 DISP2A7MBM2 1401 aa21.34■■□□□ 1.01
PRKN-201ENST00000338468 COL5A2P05997 1499 aaPredicted RBP21.33■■□□□ 1.01
PRKN-201ENST00000338468 SPATA31A1Q5TZJ5 1347 aa21.33■■□□□ 1.01
PRKN-201ENST00000338468 OVOS2A0A0J9YW53 1432 aa21.33■■□□□ 1.01
PRKN-201ENST00000338468 OVOS2Q6IE36 1432 aa21.33■■□□□ 1.01
PRKN-201ENST00000338468 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1.016e-6■■■■□ 25.1
PRKN-201ENST00000338468 CDCA8Q53HL2 280 aa21.33■■□□□ 1.01
PRKN-201ENST00000338468 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
PRKN-201ENST00000338468 TNS1Q9HBL0 1735 aaKnown RBP21.32■■□□□ 1
PRKN-201ENST00000338468 SOX12O15370 315 aa21.32■■□□□ 1
PRKN-201ENST00000338468 LARP1Q6PKG0 1096 aaKnown RBP21.32■■□□□ 1
PRKN-201ENST00000338468 ZBTB7CA1YPR0 619 aa21.31■■□□□ 1
PRKN-201ENST00000338468 FAM182BQ5T319 152 aa21.31■■□□□ 1
PRKN-201ENST00000338468 AXIN2Q9Y2T1 843 aa21.31■■□□□ 1
PRKN-201ENST00000338468 EVA1CP58658 441 aa21.3■■□□□ 1
PRKN-201ENST00000338468 R3HDM1Q15032 1099 aaKnown RBP21.3■■□□□ 1
PRKN-201ENST00000338468 RGPD5Q99666 1765 aa21.27■■□□□ 1
PRKN-201ENST00000338468 CARD14Q9BXL6 1004 aa21.26■□□□□ 0.99
PRKN-201ENST00000338468 ABCC6O95255 1503 aa21.25■□□□□ 0.99
PRKN-201ENST00000338468 USP35Q9P2H5 1018 aa21.25■□□□□ 0.99
PRKN-201ENST00000338468 CRB1P82279 1406 aa21.24■□□□□ 0.99
PRKN-201ENST00000338468 LTN1O94822 1766 aa21.24■□□□□ 0.99
PRKN-201ENST00000338468 FYB1O15117 783 aa21.24■□□□□ 0.99
PRKN-201ENST00000338468 EZH2Q15910 746 aaKnown RBP21.24■□□□□ 0.99
PRKN-201ENST00000338468 BARGINQ6ZT62 677 aa21.24■□□□□ 0.99
PRKN-201ENST00000338468 PARD3Q8TEW0 1356 aa21.23■□□□□ 0.99
PRKN-201ENST00000338468 C11orf95C9JLR9 678 aaPredicted RBP21.23■□□□□ 0.99
PRKN-201ENST00000338468 FAM196AQ6ZSG2 479 aa21.23■□□□□ 0.99
PRKN-201ENST00000338468 TCP11L2Q8N4U5 519 aa21.23■□□□□ 0.99
PRKN-201ENST00000338468 WDR17Q8IZU2 1322 aa21.22■□□□□ 0.99
PRKN-201ENST00000338468 TRIM37O94972 964 aa21.21■□□□□ 0.99
PRKN-201ENST00000338468 COG3Q96JB2 828 aa21.21■□□□□ 0.99
PRKN-201ENST00000338468 FBLN1P23142 703 aa21.2■□□□□ 0.98
PRKN-201ENST00000338468 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
PRKN-201ENST00000338468 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
PRKN-201ENST00000338468 THRAP3Q9Y2W1 955 aaKnown RBP21.2■□□□□ 0.98
PRKN-201ENST00000338468 KIF20BQ96Q89 1820 aa21.2■□□□□ 0.98
PRKN-201ENST00000338468 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
PRKN-201ENST00000338468 POLR3GLQ9BT43 218 aa21.19■□□□□ 0.98
PRKN-201ENST00000338468 APBA3O96018 575 aa21.18■□□□□ 0.98
PRKN-201ENST00000338468 TOM1L2Q6ZVM7 507 aa21.18■□□□□ 0.98
PRKN-201ENST00000338468 RREB1Q92766 1687 aa21.17■□□□□ 0.98
PRKN-201ENST00000338468 PARP4Q9UKK3 1724 aaKnown RBP21.17■□□□□ 0.98
PRKN-201ENST00000338468 ERBB3P21860 1342 aa21.16■□□□□ 0.98
PRKN-201ENST00000338468 MAP3K19Q56UN5 1328 aa21.16■□□□□ 0.98
PRKN-201ENST00000338468 CARD10Q9BWT7 1032 aa21.16■□□□□ 0.98
PRKN-201ENST00000338468 WNK3Q9BYP7 1800 aa21.15■□□□□ 0.98
PRKN-201ENST00000338468 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
PRKN-201ENST00000338468 CSB-PGBD3P0DP91 1061 aa21.14■□□□□ 0.97
PRKN-201ENST00000338468 IP6K1Q92551 441 aa21.14■□□□□ 0.97
PRKN-201ENST00000338468 NUP188Q5SRE5 1749 aa21.14■□□□□ 0.97
PRKN-201ENST00000338468 LRRC37A3O60309 1634 aa21.12■□□□□ 0.97
PRKN-201ENST00000338468 RRS1Q15050 365 aaKnown RBP21.12■□□□□ 0.97
PRKN-201ENST00000338468 ANKRD24Q8TF21 1146 aa21.12■□□□□ 0.97
PRKN-201ENST00000338468 NBPF14Q5TI25 921 aa21.11■□□□□ 0.97
PRKN-201ENST00000338468 PANK3Q9H999 370 aa21.11■□□□□ 0.97
PRKN-201ENST00000338468 KIF7Q2M1P5 1343 aa21.1■□□□□ 0.97
PRKN-201ENST00000338468 HOXC9P31274 260 aa21.1■□□□□ 0.97
PRKN-201ENST00000338468 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
PRKN-201ENST00000338468 CGNL1Q0VF96 1302 aa21.09■□□□□ 0.97
PRKN-201ENST00000338468 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
PRKN-201ENST00000338468 NLRP2Q9NX02 1062 aa21.08■□□□□ 0.97
PRKN-201ENST00000338468 RTL1A6NKG5 1358 aa21.08■□□□□ 0.96
PRKN-201ENST00000338468 YY1P25490 414 aa21.07■□□□□ 0.96
PRKN-201ENST00000338468 AMPHP49418 695 aa21.07■□□□□ 0.96
PRKN-201ENST00000338468 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
PRKN-201ENST00000338468 CDCA7Q9BWT1 371 aaPredicted RBP21.06■□□□□ 0.96
PRKN-201ENST00000338468 PPP1R1BQ9UD71 204 aaPredicted RBP21.06■□□□□ 0.96
PRKN-201ENST00000338468 FAM208AQ9UK61 1670 aaKnown RBP21.05■□□□□ 0.96
PRKN-201ENST00000338468 ANKRD26Q9UPS8 1709 aa21.05■□□□□ 0.96
PRKN-201ENST00000338468 DDB1Q16531 1140 aa21.05■□□□□ 0.96
PRKN-201ENST00000338468 SPON1Q9HCB6 807 aa21.04■□□□□ 0.96
PRKN-201ENST00000338468 RGPD2P0DJD1 1756 aa21.03■□□□□ 0.96
PRKN-201ENST00000338468 MARCH10Q8NA82 808 aaPredicted RBP21.03■□□□□ 0.96
PRKN-201ENST00000338468 EMILIN1Q9Y6C2 1016 aa21.03■□□□□ 0.96
PRKN-201ENST00000338468 KIF24Q5T7B8 1368 aa21.02■□□□□ 0.96
PRKN-201ENST00000338468 DCAF8L1A6NGE4 600 aa21.02■□□□□ 0.96
PRKN-201ENST00000338468 HSP90AB2PQ58FF8 381 aa21.02■□□□□ 0.96
PRKN-201ENST00000338468 OVOS2A0A0G2JMS6 1433 aa21.02■□□□□ 0.96
PRKN-201ENST00000338468 INSRP06213 1382 aa21.01■□□□□ 0.95
PRKN-201ENST00000338468 FLT4P35916 1363 aa21.01■□□□□ 0.95
PRKN-201ENST00000338468 TNS2Q63HR2 1409 aa21.01■□□□□ 0.95
PRKN-201ENST00000338468 RGPD3A6NKT7 1758 aaPredicted RBP21■□□□□ 0.95
PRKN-201ENST00000338468 RGPD4Q7Z3J3 1758 aa21■□□□□ 0.95
PRKN-201ENST00000338468 KCNQ2O43526 872 aa21■□□□□ 0.95
PRKN-201ENST00000338468 WASHC2AQ641Q2 1341 aa21■□□□□ 0.95
PRKN-201ENST00000338468 EXOC5O00471 708 aa20.99■□□□□ 0.95
PRKN-201ENST00000338468 IL2RBP14784 551 aa20.99■□□□□ 0.95
PRKN-201ENST00000338468 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
PRKN-201ENST00000338468 NBPF6Q5VWK0 638 aa20.98■□□□□ 0.95
PRKN-201ENST00000338468 NBPF4Q96M43 638 aa20.98■□□□□ 0.95
PRKN-201ENST00000338468 POLKQ9UBT6 870 aa20.98■□□□□ 0.95
PRKN-201ENST00000338468 SBF2Q86WG5 1849 aa20.98■□□□□ 0.95
PRKN-201ENST00000338468 NSD2O96028 1365 aa20.97■□□□□ 0.95
PRKN-201ENST00000338468 BCL9O00512 1426 aa20.97■□□□□ 0.95
PRKN-201ENST00000338468 PER1O15534 1290 aaPredicted RBP20.96■□□□□ 0.95
PRKN-201ENST00000338468 TNNT2P45379 298 aaPredicted RBP20.96■□□□□ 0.95
PRKN-201ENST00000338468 AMER1Q5JTC6 1135 aaPredicted RBP20.96■□□□□ 0.95
PRKN-201ENST00000338468 PTF1AQ7RTS3 328 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms