RNA–Protein interactions for RNA: ENST00000338402.6

SNRPEP3-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 3, humanhuman

BASIC

Gene SNRPEP3, Length 276 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP3-201ENST00000338402 USTQ9Y2C2 406 aa7.24□□□□□ -1.25
SNRPEP3-201ENST00000338402 LZTS3O60299 673 aaPredicted RBP7.23□□□□□ -1.25
SNRPEP3-201ENST00000338402 SH3BP2P78314 561 aa7.23□□□□□ -1.25
SNRPEP3-201ENST00000338402 NCOA4Q13772 614 aa7.23□□□□□ -1.25
SNRPEP3-201ENST00000338402 MAP7D1Q3KQU3 841 aa7.23□□□□□ -1.25
SNRPEP3-201ENST00000338402 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
SNRPEP3-201ENST00000338402 PHTF2Q8N3S3 785 aa7.23□□□□□ -1.25
SNRPEP3-201ENST00000338402 MKRN1Q9UHC7 482 aaKnown RBP7.23□□□□□ -1.25
SNRPEP3-201ENST00000338402 GIGYF1O75420 1035 aaPredicted RBP7.22□□□□□ -1.25
SNRPEP3-201ENST00000338402 TRIM32Q13049 653 aa7.22□□□□□ -1.25
SNRPEP3-201ENST00000338402 EML3Q32P44 896 aa7.22□□□□□ -1.25
SNRPEP3-201ENST00000338402 NBPF20Q3BBV1 942 aa7.22□□□□□ -1.25
SNRPEP3-201ENST00000338402 RNF20Q5VTR2 975 aa7.22□□□□□ -1.25
SNRPEP3-201ENST00000338402 PPP1R18Q6NYC8 613 aa7.22□□□□□ -1.25
SNRPEP3-201ENST00000338402 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.22□□□□□ -1.25
SNRPEP3-201ENST00000338402 ATP5J2-PTCD1G3V325 749 aa7.21□□□□□ -1.26
SNRPEP3-201ENST00000338402 PLA2G2CQ5R387 149 aa7.21□□□□□ -1.26
SNRPEP3-201ENST00000338402 LARP1Q6PKG0 1096 aaKnown RBP7.21□□□□□ -1.26
SNRPEP3-201ENST00000338402 CDV3Q9UKY7 258 aaKnown RBP7.21□□□□□ -1.26
SNRPEP3-201ENST00000338402 DOLKQ9UPQ8 538 aa7.21□□□□□ -1.26
SNRPEP3-201ENST00000338402 CARNS1A5YM72 827 aa7.2□□□□□ -1.26
SNRPEP3-201ENST00000338402 RASA1P20936 1047 aa7.2□□□□□ -1.26
SNRPEP3-201ENST00000338402 TSGA10IPQ3SY00 556 aa7.2□□□□□ -1.26
SNRPEP3-201ENST00000338402 C1QTNF2Q9BXJ5 285 aa7.2□□□□□ -1.26
SNRPEP3-201ENST00000338402 NOVA2Q9UNW9 492 aaKnown RBP7.2□□□□□ -1.26
SNRPEP3-201ENST00000338402 FAM196BA6NMK8 535 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L15C9J2P7 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L10C9JJH3 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L13C9JLJ4 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L12C9JPN9 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L11C9JVI0 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L21D6R901 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L18D6R9N7 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L22D6RA61 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L17D6RBQ6 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L19D6RCP7 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L20D6RJB6 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 VARSP26640 1264 aaKnown RBP7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 WNT7BP56706 349 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP17L24Q0WX57 530 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 ELOAQ14241 798 aaKnown RBP7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 OXLD1Q5BKU9 147 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 TRAF7Q6Q0C0 670 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 TRMT44Q8IYL2 757 aaKnown RBP7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 CCDC85AQ96PX6 553 aaPredicted RBP7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 CHIC2Q9UKJ5 165 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 NOD1Q9Y239 953 aa7.19□□□□□ -1.26
SNRPEP3-201ENST00000338402 CD2BP2O95400 341 aaKnown RBP7.18□□□□□ -1.26
SNRPEP3-201ENST00000338402 RPIAP49247 311 aa7.18□□□□□ -1.26
SNRPEP3-201ENST00000338402 RAB15P59190 212 aa7.18□□□□□ -1.26
SNRPEP3-201ENST00000338402 CRTC2Q53ET0 693 aaPredicted RBP7.18□□□□□ -1.26
SNRPEP3-201ENST00000338402 TRIM50Q86XT4 487 aa7.18□□□□□ -1.26
SNRPEP3-201ENST00000338402 EHBP1Q8NDI1 1231 aa7.18□□□□□ -1.26
SNRPEP3-201ENST00000338402 PATL2C9JE40 543 aaKnown RBP7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 BRD1O95696 1058 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 SKOR1P84550 965 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 VASH1Q7L8A9 365 aaPredicted RBP7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 CCDC125Q86Z20 511 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 SEPT12Q8IYM1 358 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 SIRT1Q96EB6 747 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 KCTD15Q96SI1 283 aaPredicted RBP7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 ZMIZ1Q9ULJ6 1067 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 PCDHB11Q9Y5F2 797 aa7.17□□□□□ -1.26
SNRPEP3-201ENST00000338402 TMEM88BA6NKF7 163 aa7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 ESPNB1AK53 854 aa7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 PTK7Q13308 1070 aa7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 ARID5BQ14865 1188 aa7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 TMEM164Q5U3C3 297 aa7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 FAM200AQ8TCP9 573 aa7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 STK32AQ8WU08 396 aa7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 ZNF594Q96JF6 807 aaPredicted RBP7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 DNAAF2Q9NVR5 837 aaKnown RBP7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 RBM19Q9Y4C8 960 aaKnown RBP7.16□□□□□ -1.26
SNRPEP3-201ENST00000338402 USP4Q13107 963 aa7.15□□□□□ -1.26
SNRPEP3-201ENST00000338402 RC3H1Q5TC82 1133 aaKnown RBP7.15□□□□□ -1.26
SNRPEP3-201ENST00000338402 ANKMY2Q8IV38 441 aa7.15□□□□□ -1.26
SNRPEP3-201ENST00000338402 CDCA7Q9BWT1 371 aaPredicted RBP7.15□□□□□ -1.26
SNRPEP3-201ENST00000338402 GTF2IP78347 998 aa7.14□□□□□ -1.27
SNRPEP3-201ENST00000338402 CLDN10P78369 228 aa7.14□□□□□ -1.27
SNRPEP3-201ENST00000338402 PSME1Q06323 249 aa7.14□□□□□ -1.27
SNRPEP3-201ENST00000338402 KCNA1Q09470 495 aa7.14□□□□□ -1.27
SNRPEP3-201ENST00000338402 B4GALNT3Q6L9W6 998 aa7.14□□□□□ -1.27
SNRPEP3-201ENST00000338402 ESF1Q9H501 851 aaKnown RBP7.14□□□□□ -1.27
SNRPEP3-201ENST00000338402 MAP4K5Q9Y4K4 846 aa7.14□□□□□ -1.27
SNRPEP3-201ENST00000338402 MYCP01106 439 aaPredicted RBP7.13□□□□□ -1.27
SNRPEP3-201ENST00000338402 DPYDQ12882 1025 aa7.13□□□□□ -1.27
SNRPEP3-201ENST00000338402 MMRN1Q13201 1228 aa7.13□□□□□ -1.27
SNRPEP3-201ENST00000338402 LIAT1Q6ZQX7 453 aa7.13□□□□□ -1.27
SNRPEP3-201ENST00000338402 LARGE2Q8N3Y3 721 aa7.13□□□□□ -1.27
SNRPEP3-201ENST00000338402 SLC19A1P41440 591 aa7.12□□□□□ -1.27
SNRPEP3-201ENST00000338402 INTS6LQ5JSJ4 861 aaKnown RBP7.12□□□□□ -1.27
SNRPEP3-201ENST00000338402 CCDC102BQ68D86 513 aa7.12□□□□□ -1.27
SNRPEP3-201ENST00000338402 TRIM52Q96A61 297 aa7.12□□□□□ -1.27
SNRPEP3-201ENST00000338402 GZF1Q9H116 711 aaPredicted RBP7.12□□□□□ -1.27
SNRPEP3-201ENST00000338402 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
SNRPEP3-201ENST00000338402 ERVH48-1M5A8F1 160 aa7.11□□□□□ -1.27
SNRPEP3-201ENST00000338402 TPCN2Q8NHX9 752 aa7.11□□□□□ -1.27
SNRPEP3-201ENST00000338402 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms