RNA–Protein interactions for RNA: ENST00000336915.10

SKAP1-201, Transcript of src kinase associated phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP1, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-201ENST00000336915 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
SKAP1-201ENST00000336915 L3MBTL2Q969R5 705 aa12.15□□□□□ -0.46
SKAP1-201ENST00000336915 PPP1R1BQ9UD71 204 aaPredicted RBP12.15□□□□□ -0.46
SKAP1-201ENST00000336915 UTRNP46939 3433 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 KCNQ2O43526 872 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 GCP02774 474 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 BCL11AQ9H165 835 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 SPON1Q9HCB6 807 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 NHSQ6T4R5 1651 aa12.14□□□□□ -0.47
SKAP1-201ENST00000336915 BTAF1O14981 1849 aa12.13□□□□□ -0.47
SKAP1-201ENST00000336915 NBPF1Q3BBV0 1214 aa12.13□□□□□ -0.47
SKAP1-201ENST00000336915 NINLQ9Y2I6 1382 aa12.13□□□□□ -0.47
SKAP1-201ENST00000336915 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
SKAP1-201ENST00000336915 THRAP3Q9Y2W1 955 aaKnown RBP12.12□□□□□ -0.47
SKAP1-201ENST00000336915 USP6P35125 1406 aa12.12□□□□□ -0.47
SKAP1-201ENST00000336915 MON2Q7Z3U7 1717 aa12.12□□□□□ -0.47
SKAP1-201ENST00000336915 TRPM1Q7Z4N2 1603 aa12.12□□□□□ -0.47
SKAP1-201ENST00000336915 SRPK2P78362 688 aaKnown RBP12.11□□□□□ -0.47
SKAP1-201ENST00000336915 ZNF316A6NFI3 1004 aaPredicted RBP12.11□□□□□ -0.47
SKAP1-201ENST00000336915 NLRP13Q86W25 1043 aa12.11□□□□□ -0.47
SKAP1-201ENST00000336915 PAPPAQ13219 1627 aa12.1□□□□□ -0.47
SKAP1-201ENST00000336915 ZBTB7AO95365 584 aa12.1□□□□□ -0.47
SKAP1-201ENST00000336915 CPSF1Q10570 1443 aaKnown RBP12.1□□□□□ -0.47
SKAP1-201ENST00000336915 DDB1Q16531 1140 aa12.09□□□□□ -0.47
SKAP1-201ENST00000336915 TOM1L2Q6ZVM7 507 aa12.09□□□□□ -0.47
SKAP1-201ENST00000336915 PROM2Q8N271 834 aa12.09□□□□□ -0.47
SKAP1-201ENST00000336915 AXIN2Q9Y2T1 843 aa12.09□□□□□ -0.47
SKAP1-201ENST00000336915 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
SKAP1-201ENST00000336915 NFAT5O94916 1531 aa12.09□□□□□ -0.47
SKAP1-201ENST00000336915 NLRP6P59044 892 aa12.08□□□□□ -0.48
SKAP1-201ENST00000336915 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
SKAP1-201ENST00000336915 RGPD2P0DJD1 1756 aa12.08□□□□□ -0.48
SKAP1-201ENST00000336915 CENPJQ9HC77 1338 aaPredicted RBP12.08□□□□□ -0.48
SKAP1-201ENST00000336915 PLSCR1O15162 318 aa12.07□□□□□ -0.48
SKAP1-201ENST00000336915 SOX12O15370 315 aa12.07□□□□□ -0.48
SKAP1-201ENST00000336915 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
SKAP1-201ENST00000336915 CABP1Q9NZU7 370 aa12.07□□□□□ -0.48
SKAP1-201ENST00000336915 USP54Q70EL1 1684 aa12.07□□□□□ -0.48
SKAP1-201ENST00000336915 QSER1Q2KHR3 1735 aa12.07□□□□□ -0.48
SKAP1-201ENST00000336915 BCL11BQ9C0K0 894 aaPredicted RBP12.06□□□□□ -0.48
SKAP1-201ENST00000336915 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
SKAP1-201ENST00000336915 WDR17Q8IZU2 1322 aa12.06□□□□□ -0.48
SKAP1-201ENST00000336915 PTGER2P43116 358 aa12.06□□□□□ -0.48
SKAP1-201ENST00000336915 COL24A1Q17RW2 1714 aa12.04□□□□□ -0.48
SKAP1-201ENST00000336915 DOT1LQ8TEK3 1739 aa12.04□□□□□ -0.48
SKAP1-201ENST00000336915 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
SKAP1-201ENST00000336915 ABCC6O95255 1503 aa12.04□□□□□ -0.48
SKAP1-201ENST00000336915 TNS2Q63HR2 1409 aa12.04□□□□□ -0.48
SKAP1-201ENST00000336915 BRD4O60885 1362 aaPredicted RBP12.03□□□□□ -0.48
SKAP1-201ENST00000336915 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
SKAP1-201ENST00000336915 TXNRD1Q16881 649 aa12.03□□□□□ -0.48
SKAP1-201ENST00000336915 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
SKAP1-201ENST00000336915 BCL9O00512 1426 aa12.03□□□□□ -0.48
SKAP1-201ENST00000336915 ZNF784Q8NCA9 323 aaPredicted RBP12.02□□□□□ -0.48
SKAP1-201ENST00000336915 GOLGB1Q14789 3259 aaKnown RBP12.02□□□□□ -0.49
SKAP1-201ENST00000336915 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
SKAP1-201ENST00000336915 CSB-PGBD3P0DP91 1061 aa12.01□□□□□ -0.49
SKAP1-201ENST00000336915 ARHGEF25Q86VW2 580 aa12.01□□□□□ -0.49
SKAP1-201ENST00000336915 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
SKAP1-201ENST00000336915 ANP32EQ9BTT0 268 aa12.01□□□□□ -0.49
SKAP1-201ENST00000336915 LY75O60449 1722 aa12.01□□□□□ -0.49
SKAP1-201ENST00000336915 SLC15A2Q16348 729 aa12.01□□□□□ -0.49
SKAP1-201ENST00000336915 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
SKAP1-201ENST00000336915 TTC21BQ7Z4L5 1316 aa12□□□□□ -0.49
SKAP1-201ENST00000336915 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
SKAP1-201ENST00000336915 SGIP1Q9BQI5 828 aa12□□□□□ -0.49
SKAP1-201ENST00000336915 SYT17Q9BSW7 474 aa12□□□□□ -0.49
SKAP1-201ENST00000336915 FAM208AQ9UK61 1670 aaKnown RBP12□□□□□ -0.49
SKAP1-201ENST00000336915 CARD10Q9BWT7 1032 aa11.99□□□□□ -0.49
SKAP1-201ENST00000336915 ZNF827Q17R98 1081 aa11.97□□□□□ -0.49
SKAP1-201ENST00000336915 CDCA7Q9BWT1 371 aaPredicted RBP11.97□□□□□ -0.49
SKAP1-201ENST00000336915 MTFR1LQ9H019 292 aa11.97□□□□□ -0.49
SKAP1-201ENST00000336915 EVC2Q86UK5 1308 aa11.97□□□□□ -0.49
SKAP1-201ENST00000336915 CCDC7Q96M83 1385 aa11.97□□□□□ -0.49
SKAP1-201ENST00000336915 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
SKAP1-201ENST00000336915 EXOC5O00471 708 aa11.96□□□□□ -0.49
SKAP1-201ENST00000336915 TAF1LQ8IZX4 1826 aa11.96□□□□□ -0.49
SKAP1-201ENST00000336915 KTN1Q86UP2 1357 aaKnown RBP11.96□□□□□ -0.49
SKAP1-201ENST00000336915 EIF4G2P78344 907 aaKnown RBP eCLIP11.96□□□□□ -0.5
SKAP1-201ENST00000336915 KCNH5Q8NCM2 988 aa11.96□□□□□ -0.5
SKAP1-201ENST00000336915 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
SKAP1-201ENST00000336915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.95□□□□□ -0.5
SKAP1-201ENST00000336915 LRRC4BQ9NT99 713 aa11.95□□□□□ -0.5
SKAP1-201ENST00000336915 ERBB3P21860 1342 aa11.95□□□□□ -0.5
SKAP1-201ENST00000336915 TTC21AQ8NDW8 1320 aa11.95□□□□□ -0.5
SKAP1-201ENST00000336915 ROCK2O75116 1388 aaKnown RBP11.94□□□□□ -0.5
SKAP1-201ENST00000336915 C5P01031 1676 aa11.94□□□□□ -0.5
SKAP1-201ENST00000336915 ARXQ96QS3 562 aa11.94□□□□□ -0.5
SKAP1-201ENST00000336915 HSPA5P11021 654 aaKnown RBP11.93□□□□□ -0.5
SKAP1-201ENST00000336915 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
SKAP1-201ENST00000336915 KCNQ4P56696 695 aa11.93□□□□□ -0.5
SKAP1-201ENST00000336915 NME9Q86XW9 330 aa11.93□□□□□ -0.5
SKAP1-201ENST00000336915 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
SKAP1-201ENST00000336915 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
SKAP1-201ENST00000336915 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
SKAP1-201ENST00000336915 ITGB4P16144 1822 aa11.92□□□□□ -0.5
SKAP1-201ENST00000336915 USP47Q96K76 1375 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms