RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
CMTM1-203ENST00000333001 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
CMTM1-203ENST00000333001 THSD7AQ9UPZ6 1657 aa17.07■□□□□ 0.32
CMTM1-203ENST00000333001 ANKRD36BQ8N2N9 1353 aa17.07■□□□□ 0.32
CMTM1-203ENST00000333001 SOX12O15370 315 aa17.07■□□□□ 0.32
CMTM1-203ENST00000333001 BAG6P46379 1132 aa17.07■□□□□ 0.32
CMTM1-203ENST00000333001 PDE3BQ13370 1112 aa17.06■□□□□ 0.32
CMTM1-203ENST00000333001 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
CMTM1-203ENST00000333001 COL18A1P39060 1754 aa17.06■□□□□ 0.32
CMTM1-203ENST00000333001 ABCC6O95255 1503 aa17.06■□□□□ 0.32
CMTM1-203ENST00000333001 WDR17Q8IZU2 1322 aa17.05■□□□□ 0.32
CMTM1-203ENST00000333001 C11orf95C9JLR9 678 aaPredicted RBP17.05■□□□□ 0.32
CMTM1-203ENST00000333001 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.32
CMTM1-203ENST00000333001 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
CMTM1-203ENST00000333001 COG3Q96JB2 828 aa17.05■□□□□ 0.32
CMTM1-203ENST00000333001 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
CMTM1-203ENST00000333001 AXIN2Q9Y2T1 843 aa17.05■□□□□ 0.32
CMTM1-203ENST00000333001 NFAT5O94916 1531 aa17.05■□□□□ 0.32
CMTM1-203ENST00000333001 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
CMTM1-203ENST00000333001 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
CMTM1-203ENST00000333001 OVOS2A0A0J9YW53 1432 aa17.02■□□□□ 0.31
CMTM1-203ENST00000333001 OVOS2Q6IE36 1432 aa17.02■□□□□ 0.31
CMTM1-203ENST00000333001 RGPD5Q99666 1765 aa17■□□□□ 0.31
CMTM1-203ENST00000333001 CCDC7Q96M83 1385 aa17■□□□□ 0.31
CMTM1-203ENST00000333001 LRP5O75197 1615 aa16.99■□□□□ 0.31
CMTM1-203ENST00000333001 LTN1O94822 1766 aa16.98■□□□□ 0.31
CMTM1-203ENST00000333001 FYB1O15117 783 aa16.98■□□□□ 0.31
CMTM1-203ENST00000333001 DDB1Q16531 1140 aa16.98■□□□□ 0.31
CMTM1-203ENST00000333001 FAM182BQ5T319 152 aa16.98■□□□□ 0.31
CMTM1-203ENST00000333001 IP6K1Q92551 441 aa16.98■□□□□ 0.31
CMTM1-203ENST00000333001 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
CMTM1-203ENST00000333001 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
CMTM1-203ENST00000333001 HSPA5P11021 654 aaKnown RBP16.97■□□□□ 0.31
CMTM1-203ENST00000333001 ERBB3P21860 1342 aa16.96■□□□□ 0.31
CMTM1-203ENST00000333001 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
CMTM1-203ENST00000333001 EXOC5O00471 708 aa16.95■□□□□ 0.3
CMTM1-203ENST00000333001 AMPHP49418 695 aa16.95■□□□□ 0.3
CMTM1-203ENST00000333001 ANKRD24Q8TF21 1146 aa16.95■□□□□ 0.3
CMTM1-203ENST00000333001 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
CMTM1-203ENST00000333001 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
CMTM1-203ENST00000333001 TRIM37O94972 964 aa16.94■□□□□ 0.3
CMTM1-203ENST00000333001 EN1Q05925 392 aaPredicted RBP16.93■□□□□ 0.3
CMTM1-203ENST00000333001 POLR3GLQ9BT43 218 aa16.93■□□□□ 0.3
CMTM1-203ENST00000333001 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
CMTM1-203ENST00000333001 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
CMTM1-203ENST00000333001 MAP3K19Q56UN5 1328 aa16.93■□□□□ 0.3
CMTM1-203ENST00000333001 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
CMTM1-203ENST00000333001 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
CMTM1-203ENST00000333001 MYOM1P52179 1685 aa16.91■□□□□ 0.3
CMTM1-203ENST00000333001 RTL1A6NKG5 1358 aa16.91■□□□□ 0.3
CMTM1-203ENST00000333001 NSD3Q9BZ95 1437 aa16.91■□□□□ 0.3
CMTM1-203ENST00000333001 APBA3O96018 575 aa16.91■□□□□ 0.3
CMTM1-203ENST00000333001 HOXC9P31274 260 aa16.91■□□□□ 0.3
CMTM1-203ENST00000333001 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
CMTM1-203ENST00000333001 PARD3Q8TEW0 1356 aa16.9■□□□□ 0.3
CMTM1-203ENST00000333001 IL2RBP14784 551 aa16.9■□□□□ 0.3
CMTM1-203ENST00000333001 WNK3Q9BYP7 1800 aa16.9■□□□□ 0.3
CMTM1-203ENST00000333001 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.3
CMTM1-203ENST00000333001 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
CMTM1-203ENST00000333001 BCL9O00512 1426 aa16.89■□□□□ 0.29
CMTM1-203ENST00000333001 R3HDM1Q15032 1099 aaKnown RBP16.89■□□□□ 0.29
CMTM1-203ENST00000333001 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
CMTM1-203ENST00000333001 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
CMTM1-203ENST00000333001 FBLN1P23142 703 aa16.87■□□□□ 0.29
CMTM1-203ENST00000333001 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
CMTM1-203ENST00000333001 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
CMTM1-203ENST00000333001 LTV1Q96GA3 475 aaPredicted RBP16.87■□□□□ 0.29
CMTM1-203ENST00000333001 CAMKK2Q96RR4 588 aa16.87■□□□□ 0.29
CMTM1-203ENST00000333001 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
CMTM1-203ENST00000333001 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
CMTM1-203ENST00000333001 SMG6Q86US8 1419 aaKnown RBP16.86■□□□□ 0.29
CMTM1-203ENST00000333001 PEAK1Q9H792 1746 aa16.85■□□□□ 0.29
CMTM1-203ENST00000333001 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
CMTM1-203ENST00000333001 PANK3Q9H999 370 aa16.85■□□□□ 0.29
CMTM1-203ENST00000333001 FLT4P35916 1363 aa16.85■□□□□ 0.29
CMTM1-203ENST00000333001 PLSCR1O15162 318 aa16.84■□□□□ 0.29
CMTM1-203ENST00000333001 INSRP06213 1382 aa16.84■□□□□ 0.29
CMTM1-203ENST00000333001 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
CMTM1-203ENST00000333001 NBPF14Q5TI25 921 aa16.83■□□□□ 0.28
CMTM1-203ENST00000333001 NSD2O96028 1365 aa16.81■□□□□ 0.28
CMTM1-203ENST00000333001 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
CMTM1-203ENST00000333001 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
CMTM1-203ENST00000333001 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
CMTM1-203ENST00000333001 WASHC2AQ641Q2 1341 aa16.79■□□□□ 0.28
CMTM1-203ENST00000333001 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
CMTM1-203ENST00000333001 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
CMTM1-203ENST00000333001 RAPGEF4Q8WZA2 1011 aa16.79■□□□□ 0.28
CMTM1-203ENST00000333001 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
CMTM1-203ENST00000333001 MAP2P11137 1827 aaKnown RBP16.79■□□□□ 0.28
CMTM1-203ENST00000333001 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
CMTM1-203ENST00000333001 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
CMTM1-203ENST00000333001 EMILIN1Q9Y6C2 1016 aa16.78■□□□□ 0.28
CMTM1-203ENST00000333001 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.28
CMTM1-203ENST00000333001 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.28
CMTM1-203ENST00000333001 KIF7Q2M1P5 1343 aa16.77■□□□□ 0.28
CMTM1-203ENST00000333001 ANKRD26Q9UPS8 1709 aa16.77■□□□□ 0.28
CMTM1-203ENST00000333001 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
CMTM1-203ENST00000333001 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
CMTM1-203ENST00000333001 POLKQ9UBT6 870 aa16.77■□□□□ 0.28
CMTM1-203ENST00000333001 PPP1R1BQ9UD71 204 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms