RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 KIF7Q2M1P5 1343 aa16.78■□□□□ 0.28
FNDC1-202ENST00000329629 ERICH4A6NGS2 130 aa16.78■□□□□ 0.28
FNDC1-202ENST00000329629 KIAA0586Q9BVV6 1533 aa16.77■□□□□ 0.28
FNDC1-202ENST00000329629 CDK19Q9BWU1 502 aa16.77■□□□□ 0.28
FNDC1-202ENST00000329629 CENPHQ9H3R5 247 aa16.77■□□□□ 0.28
FNDC1-202ENST00000329629 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
FNDC1-202ENST00000329629 ERLIN2O94905 339 aa16.77■□□□□ 0.27
FNDC1-202ENST00000329629 RABEP1Q15276 862 aa16.77■□□□□ 0.27
FNDC1-202ENST00000329629 SYCP1Q15431 976 aa16.77■□□□□ 0.27
FNDC1-202ENST00000329629 ENOX2Q16206 610 aaKnown RBP16.77■□□□□ 0.27
FNDC1-202ENST00000329629 CDCA7LQ96GN5 454 aa16.77■□□□□ 0.27
FNDC1-202ENST00000329629 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.27
FNDC1-202ENST00000329629 CCDC181Q5TID7 509 aa16.77■□□□□ 0.27
FNDC1-202ENST00000329629 TNMDQ9H2S6 317 aa16.77■□□□□ 0.27
FNDC1-202ENST00000329629 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
FNDC1-202ENST00000329629 SURF6O75683 361 aaKnown RBP16.76■□□□□ 0.27
FNDC1-202ENST00000329629 AAMPQ13685 434 aa16.76■□□□□ 0.27
FNDC1-202ENST00000329629 SLC26A8Q96RN1 970 aa16.76■□□□□ 0.27
FNDC1-202ENST00000329629 CCDC192P0DO97 292 aa16.76■□□□□ 0.27
FNDC1-202ENST00000329629 TATP17735 454 aaPredicted RBP16.76■□□□□ 0.27
FNDC1-202ENST00000329629 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
FNDC1-202ENST00000329629 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
FNDC1-202ENST00000329629 TMEM132AQ24JP5 1023 aa16.76■□□□□ 0.27
FNDC1-202ENST00000329629 PPFIBP1Q86W92 1011 aa16.75■□□□□ 0.27
FNDC1-202ENST00000329629 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
FNDC1-202ENST00000329629 ZNHIT6Q9NWK9 470 aaKnown RBP16.75■□□□□ 0.27
FNDC1-202ENST00000329629 ADAMTS8Q9UP79 889 aa16.75■□□□□ 0.27
FNDC1-202ENST00000329629 KRT18P05783 430 aaKnown RBP16.75■□□□□ 0.27
FNDC1-202ENST00000329629 TXLNAP40222 546 aa16.75■□□□□ 0.27
FNDC1-202ENST00000329629 SEPT7Q16181 437 aaKnown RBP16.75■□□□□ 0.27
FNDC1-202ENST00000329629 TOM1L2Q6ZVM7 507 aa16.74■□□□□ 0.27
FNDC1-202ENST00000329629 CCAR1Q8IX12 1150 aaKnown RBP16.74■□□□□ 0.27
FNDC1-202ENST00000329629 DEF6Q9H4E7 631 aa16.74■□□□□ 0.27
FNDC1-202ENST00000329629 MCM2P49736 904 aa16.74■□□□□ 0.27
FNDC1-202ENST00000329629 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
FNDC1-202ENST00000329629 PDCP20941 246 aa16.74■□□□□ 0.27
FNDC1-202ENST00000329629 TAX1BP1Q86VP1 789 aa16.74■□□□□ 0.27
FNDC1-202ENST00000329629 CD109Q6YHK3 1445 aa16.74■□□□□ 0.27
FNDC1-202ENST00000329629 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
FNDC1-202ENST00000329629 MTHFSP49914 203 aa16.73■□□□□ 0.27
FNDC1-202ENST00000329629 ZRSR2Q15696 482 aaKnown RBP16.73■□□□□ 0.27
FNDC1-202ENST00000329629 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
FNDC1-202ENST00000329629 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
FNDC1-202ENST00000329629 ERBINQ96RT1 1412 aa16.72■□□□□ 0.27
FNDC1-202ENST00000329629 TBC1D2BQ9UPU7 963 aa16.72■□□□□ 0.27
FNDC1-202ENST00000329629 RTEL1-TNFRSF6BF6WH68 1400 aa16.72■□□□□ 0.27
FNDC1-202ENST00000329629 ERLIN1O75477 346 aa16.72■□□□□ 0.27
FNDC1-202ENST00000329629 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
FNDC1-202ENST00000329629 TANGO6Q9C0B7 1094 aa16.72■□□□□ 0.27
FNDC1-202ENST00000329629 IQGAP2Q13576 1575 aa16.71■□□□□ 0.27
FNDC1-202ENST00000329629 GOLGA6L7A0A1B0GV03 622 aa16.71■□□□□ 0.27
FNDC1-202ENST00000329629 ME1P48163 572 aa16.71■□□□□ 0.27
FNDC1-202ENST00000329629 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
FNDC1-202ENST00000329629 FAM177BA6PVY3 158 aa16.71■□□□□ 0.27
FNDC1-202ENST00000329629 PODXL2Q9NZ53 605 aa16.71■□□□□ 0.27
FNDC1-202ENST00000329629 RPGRIP1LQ68CZ1 1315 aa16.71■□□□□ 0.27
FNDC1-202ENST00000329629 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
FNDC1-202ENST00000329629 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.27
FNDC1-202ENST00000329629 CABP1Q9NZU7 370 aa16.71■□□□□ 0.26
FNDC1-202ENST00000329629 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.26
FNDC1-202ENST00000329629 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
FNDC1-202ENST00000329629 NOB1Q9ULX3 412 aaKnown RBP16.7■□□□□ 0.26
FNDC1-202ENST00000329629 HIP1O00291 1037 aa16.7■□□□□ 0.26
FNDC1-202ENST00000329629 CCDC102AQ96A19 550 aa16.7■□□□□ 0.26
FNDC1-202ENST00000329629 EXOSC9Q06265 439 aaKnown RBP16.69■□□□□ 0.26
FNDC1-202ENST00000329629 PAF1Q8N7H5 531 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 GNAI3P08754 354 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 AEBP1Q8IUX7 1158 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 DDX54Q8TDD1 881 aaKnown RBP16.69■□□□□ 0.26
FNDC1-202ENST00000329629 ZNF428Q96B54 188 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
FNDC1-202ENST00000329629 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
FNDC1-202ENST00000329629 CCDC30Q5VVM6 783 aa16.68■□□□□ 0.26
FNDC1-202ENST00000329629 DAPK1P53355 1430 aa16.68■□□□□ 0.26
FNDC1-202ENST00000329629 CABP4P57796 275 aa16.68■□□□□ 0.26
FNDC1-202ENST00000329629 NBPF1Q3BBV0 1214 aa16.68■□□□□ 0.26
FNDC1-202ENST00000329629 PPP1R1BQ9UD71 204 aaPredicted RBP16.68■□□□□ 0.26
FNDC1-202ENST00000329629 GCC1Q96CN9 775 aa16.68■□□□□ 0.26
FNDC1-202ENST00000329629 WDR33Q9C0J8 1336 aaKnown RBP16.68■□□□□ 0.26
FNDC1-202ENST00000329629 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 CBFA2T2O43439 604 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 BCAR3O75815 825 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 JMYQ8N9B5 988 aa16.67■□□□□ 0.26
FNDC1-202ENST00000329629 LRRFIP2Q9Y608 721 aaKnown RBP16.66■□□□□ 0.26
FNDC1-202ENST00000329629 ANKRD18AQ8IVF6 992 aa16.66■□□□□ 0.26
FNDC1-202ENST00000329629 BRD4O60885 1362 aaPredicted RBP16.66■□□□□ 0.26
FNDC1-202ENST00000329629 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
FNDC1-202ENST00000329629 KRT85P78386 507 aa16.66■□□□□ 0.26
FNDC1-202ENST00000329629 SEPT11Q9NVA2 429 aaKnown RBP16.66■□□□□ 0.26
FNDC1-202ENST00000329629 ARHGEF11O15085 1522 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms