RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 PRM3Q9NNZ6 103 aa3.57□□□□□ -1.84
CCDC144A-201ENST00000328495 WDR4P57081 412 aaKnown RBP3.57□□□□□ -1.84
CCDC144A-201ENST00000328495 ATP13A2Q9NQ11 1180 aa3.57□□□□□ -1.84
CCDC144A-201ENST00000328495 NBPF20Q3BBV1 942 aa3.57□□□□□ -1.84
CCDC144A-201ENST00000328495 SENP2Q9HC62 589 aa3.57□□□□□ -1.84
CCDC144A-201ENST00000328495 CECR2Q9BXF3 1484 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 ZBBXA8MT70 800 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 GRM5P41594 1212 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 SNRKQ9NRH2 765 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 DACH1Q9UI36 760 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 NR3C2P08235 984 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 TIMP2P16035 220 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 DZIP3Q86Y13 1208 aaKnown RBP3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 CCDC116Q8IYX3 515 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 ZNF592Q92610 1267 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 EMILIN1Q9Y6C2 1016 aa3.56□□□□□ -1.84
CCDC144A-201ENST00000328495 ZIC2O95409 532 aaPredicted RBP3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 KIFC2Q96AC6 838 aa3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 KCTD15Q96SI1 283 aaPredicted RBP3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 OCSTAMPQ9BR26 566 aa3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 GMPR2Q9P2T1 348 aaKnown RBP3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 ZNF330Q9Y3S2 320 aaPredicted RBP3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 DHX9Q08211 1270 aaKnown RBP3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 C11orf95C9JLR9 678 aaPredicted RBP3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 PGPEP1Q9NXJ5 209 aa3.55□□□□□ -1.84
CCDC144A-201ENST00000328495 FBXO45P0C2W1 286 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 BMP1P13497 986 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 NR1H3Q13133 447 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 TMEM132AQ24JP5 1023 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 ITPKCQ96DU7 683 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 KLF16Q9BXK1 252 aaPredicted RBP3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 ZFAND3Q9H8U3 227 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 PCDHB9Q9Y5E1 797 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 SCARF1Q14162 830 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 INTS6LQ5JSJ4 861 aaKnown RBP3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 TRIM52Q96A61 297 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 TRIM47Q96LD4 638 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 LTBP4Q8N2S1 1624 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 POTECB2RU33 542 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 UPP2O95045 317 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 MCCD1P59942 119 aaPredicted RBP3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 PPP1R26Q5T8A7 1209 aaPredicted RBP3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 MRPL14Q6P1L8 145 aaKnown RBP3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 TRIM46Q7Z4K8 759 aa3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 BAZ1AQ9NRL2 1556 aaPredicted RBP3.54□□□□□ -1.84
CCDC144A-201ENST00000328495 MCM6Q14566 821 aa3.53□□□□□ -1.84
CCDC144A-201ENST00000328495 SEPT12Q8IYM1 358 aa3.53□□□□□ -1.84
CCDC144A-201ENST00000328495 TBC1D2BQ9UPU7 963 aa3.53□□□□□ -1.84
CCDC144A-201ENST00000328495 GPR37L1O60883 481 aa3.53□□□□□ -1.84
CCDC144A-201ENST00000328495 MEIOBQ8N635 442 aa3.53□□□□□ -1.84
CCDC144A-201ENST00000328495 RAB15P59190 212 aa3.52□□□□□ -1.85
CCDC144A-201ENST00000328495 CCDC125Q86Z20 511 aa3.52□□□□□ -1.85
CCDC144A-201ENST00000328495 ESPNB1AK53 854 aa3.52□□□□□ -1.85
CCDC144A-201ENST00000328495 RNF20Q5VTR2 975 aa3.52□□□□□ -1.85
CCDC144A-201ENST00000328495 LINC00528Q8N1L1 170 aa3.52□□□□□ -1.85
CCDC144A-201ENST00000328495 FLIIQ13045 1269 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 ZFP42Q96MM3 310 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 PURBQ96QR8 312 aaKnown RBP3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 TSEN34Q9BSV6 310 aaKnown RBP3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 BMP2P12643 396 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 SNRPBP14678 240 aaKnown RBP3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 ABL2P42684 1182 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 EIF4G2P78344 907 aaKnown RBP eCLIP3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 C6orf118Q5T5N4 469 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 GDPD2Q9HCC8 539 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 ABCC9O60706 1549 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 CC2D2AQ9P2K1 1620 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 ERVH48-1M5A8F1 160 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 WWC1Q8IX03 1113 aa3.51□□□□□ -1.85
CCDC144A-201ENST00000328495 GIGYF1O75420 1035 aaPredicted RBP3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 WASHC4Q2M389 1173 aa3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 Q6ZVU0 165 aa3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 ZNF784Q8NCA9 323 aaPredicted RBP3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 ZNF775Q96BV0 537 aaPredicted RBP3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 THOC2Q8NI27 1593 aaKnown RBP3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 RAD21O60216 631 aa3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 CBLBQ13191 982 aa3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 IRF5Q13568 498 aa3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 TMPRSS4Q9NRS4 437 aa3.5□□□□□ -1.85
CCDC144A-201ENST00000328495 UBTFP17480 764 aaKnown RBP3.49□□□□□ -1.85
CCDC144A-201ENST00000328495 COG6Q9Y2V7 657 aa3.49□□□□□ -1.85
CCDC144A-201ENST00000328495 MAN1A2O60476 641 aa3.49□□□□□ -1.85
CCDC144A-201ENST00000328495 ADH1AP07327 375 aa3.49□□□□□ -1.85
CCDC144A-201ENST00000328495 CYLDQ9NQC7 956 aa3.49□□□□□ -1.85
CCDC144A-201ENST00000328495 SOX11P35716 441 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 RELBQ01201 579 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 VAC14Q08AM6 782 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 ESF1Q9H501 851 aaKnown RBP3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 PCDHB11Q9Y5F2 797 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 SYNJ2O15056 1496 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 SPINT1O43278 529 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 LILRA1O75019 489 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 CC2D2BQ6DHV5 1058 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 AGBL1Q96MI9 1066 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 CEP126Q9P2H0 1117 aa3.48□□□□□ -1.85
CCDC144A-201ENST00000328495 LRP5O75197 1615 aa3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 TTLL8A6PVC2 850 aa3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 SEMA3FQ13275 785 aa3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 SLFNL1Q499Z3 407 aa3.47□□□□□ -1.85
CCDC144A-201ENST00000328495 SOS2Q07890 1332 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms