RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 ANKRD26Q9UPS8 1709 aa21.37■■□□□ 1.01
TSFM-201ENST00000323833 EVA1CP58658 441 aa21.36■■□□□ 1.01
TSFM-201ENST00000323833 COL5A2P05997 1499 aaPredicted RBP21.35■■□□□ 1.01
TSFM-201ENST00000323833 AXIN2Q9Y2T1 843 aa21.35■■□□□ 1.01
TSFM-201ENST00000323833 SPATA31A5Q5VU36 1347 aa21.34■■□□□ 1.01
TSFM-201ENST00000323833 SPATA31A7Q8IWB4 1347 aa21.34■■□□□ 1.01
TSFM-201ENST00000323833 FBLN1P23142 703 aa21.34■■□□□ 1.01
TSFM-201ENST00000323833 LARP1Q6PKG0 1096 aaKnown RBP21.33■■□□□ 1.01
TSFM-201ENST00000323833 MAP2P11137 1827 aaKnown RBP21.33■■□□□ 1.01
TSFM-201ENST00000323833 CCDC7Q96M83 1385 aa21.33■■□□□ 1
TSFM-201ENST00000323833 WASHC2AQ641Q2 1341 aa21.31■■□□□ 1
TSFM-201ENST00000323833 ABCC6O95255 1503 aa21.31■■□□□ 1
TSFM-201ENST00000323833 CGNL1Q0VF96 1302 aa21.3■■□□□ 1
TSFM-201ENST00000323833 SPATA31A1Q5TZJ5 1347 aa21.3■■□□□ 1
TSFM-201ENST00000323833 FAM98CQ17RN3 349 aaKnown RBP21.3■■□□□ 1
TSFM-201ENST00000323833 USP35Q9P2H5 1018 aa21.3■■□□□ 1
TSFM-201ENST00000323833 WNK3Q9BYP7 1800 aa21.29■■□□□ 1
TSFM-201ENST00000323833 THSD7AQ9UPZ6 1657 aa21.28■■□□□ 1
TSFM-201ENST00000323833 ONECUT3O60422 494 aaPredicted RBP21.28■■□□□ 1
TSFM-201ENST00000323833 SEPT12Q8IYM1 358 aa21.28■■□□□ 1
TSFM-201ENST00000323833 CRB1P82279 1406 aa21.28■■□□□ 1
TSFM-201ENST00000323833 RGPD2P0DJD1 1756 aa21.28■■□□□ 1
TSFM-201ENST00000323833 MAP3K19Q56UN5 1328 aa21.27■□□□□ 0.99
TSFM-201ENST00000323833 PEAK1Q9H792 1746 aa21.26■□□□□ 0.99
TSFM-201ENST00000323833 A0A0G2JS52 829 aa21.26■□□□□ 0.99
TSFM-201ENST00000323833 MYT1Q01538 1121 aa21.26■□□□□ 0.99
TSFM-201ENST00000323833 RRS1Q15050 365 aaKnown RBP21.26■□□□□ 0.99
TSFM-201ENST00000323833 WDR17Q8IZU2 1322 aa21.26■□□□□ 0.99
TSFM-201ENST00000323833 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
TSFM-201ENST00000323833 CSB-PGBD3P0DP91 1061 aa21.24■□□□□ 0.99
TSFM-201ENST00000323833 IP6K1Q92551 441 aa21.24■□□□□ 0.99
TSFM-201ENST00000323833 AMPHP49418 695 aa21.23■□□□□ 0.99
TSFM-201ENST00000323833 TCP11L2Q8N4U5 519 aa21.23■□□□□ 0.99
TSFM-201ENST00000323833 KNSTRNQ9Y448 316 aa21.23■□□□□ 0.99
TSFM-201ENST00000323833 FAM208AQ9UK61 1670 aaKnown RBP21.22■□□□□ 0.99
TSFM-201ENST00000323833 PARP4Q9UKK3 1724 aaKnown RBP21.22■□□□□ 0.99
TSFM-201ENST00000323833 HOXC9P31274 260 aa21.22■□□□□ 0.99
TSFM-201ENST00000323833 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
TSFM-201ENST00000323833 ERBB3P21860 1342 aa21.22■□□□□ 0.99
TSFM-201ENST00000323833 BLMP54132 1417 aaPredicted RBP21.21■□□□□ 0.99
TSFM-201ENST00000323833 BARGINQ6ZT62 677 aa21.21■□□□□ 0.99
TSFM-201ENST00000323833 ANKRD24Q8TF21 1146 aa21.21■□□□□ 0.99
TSFM-201ENST00000323833 LTV1Q96GA3 475 aaPredicted RBP21.2■□□□□ 0.98
TSFM-201ENST00000323833 THRAP3Q9Y2W1 955 aaKnown RBP21.2■□□□□ 0.98
TSFM-201ENST00000323833 NSD2O96028 1365 aa21.2■□□□□ 0.98
TSFM-201ENST00000323833 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
TSFM-201ENST00000323833 TNNT2P45379 298 aaPredicted RBP21.19■□□□□ 0.98
TSFM-201ENST00000323833 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
TSFM-201ENST00000323833 RTL1A6NKG5 1358 aa21.19■□□□□ 0.98
TSFM-201ENST00000323833 KRT27Q7Z3Y8 459 aa21.18■□□□□ 0.98
TSFM-201ENST00000323833 CARD10Q9BWT7 1032 aa21.18■□□□□ 0.98
TSFM-201ENST00000323833 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
TSFM-201ENST00000323833 UPF1Q92900 1129 aaKnown RBP eCLIP21.17■□□□□ 0.98
TSFM-201ENST00000323833 NLRP2Q9NX02 1062 aa21.17■□□□□ 0.98
TSFM-201ENST00000323833 LRRC37A3O60309 1634 aa21.17■□□□□ 0.98
TSFM-201ENST00000323833 FLT4P35916 1363 aa21.15■□□□□ 0.98
TSFM-201ENST00000323833 PPM1GO15355 546 aaPredicted RBP21.15■□□□□ 0.98
TSFM-201ENST00000323833 HSP90AB2PQ58FF8 381 aa21.15■□□□□ 0.98
TSFM-201ENST00000323833 MORC1Q86VD1 984 aa21.15■□□□□ 0.98
TSFM-201ENST00000323833 FAM182BQ5T319 152 aa21.14■□□□□ 0.97
TSFM-201ENST00000323833 POLKQ9UBT6 870 aa21.14■□□□□ 0.97
TSFM-201ENST00000323833 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
TSFM-201ENST00000323833 EP400Q96L91 3159 aa21.13■□□□□ 0.97
TSFM-201ENST00000323833 INSRP06213 1382 aa21.12■□□□□ 0.97
TSFM-201ENST00000323833 CNGB1Q14028 1251 aaPredicted RBP21.12■□□□□ 0.97
TSFM-201ENST00000323833 CC2D1BQ5T0F9 858 aaKnown RBP21.12■□□□□ 0.97
TSFM-201ENST00000323833 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
TSFM-201ENST00000323833 PDE3BQ13370 1112 aa21.1■□□□□ 0.97
TSFM-201ENST00000323833 SMG6Q86US8 1419 aaKnown RBP21.09■□□□□ 0.97
TSFM-201ENST00000323833 SBF2Q86WG5 1849 aa21.08■□□□□ 0.97
TSFM-201ENST00000323833 DDB1Q16531 1140 aa21.08■□□□□ 0.97
TSFM-201ENST00000323833 CDCA7Q9BWT1 371 aaPredicted RBP21.08■□□□□ 0.97
TSFM-201ENST00000323833 NBPF6Q5VWK0 638 aa21.07■□□□□ 0.96
TSFM-201ENST00000323833 NBPF4Q96M43 638 aa21.07■□□□□ 0.96
TSFM-201ENST00000323833 RGPD1P0DJD0 1748 aa21.07■□□□□ 0.96
TSFM-201ENST00000323833 IL2RBP14784 551 aa21.06■□□□□ 0.96
TSFM-201ENST00000323833 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
TSFM-201ENST00000323833 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
TSFM-201ENST00000323833 KAT6BQ8WYB5 2073 aa21.05■□□□□ 0.96
TSFM-201ENST00000323833 SHANK3Q9BYB0 1731 aa21.04■□□□□ 0.96
TSFM-201ENST00000323833 TNS1Q9HBL0 1735 aaKnown RBP21.04■□□□□ 0.96
TSFM-201ENST00000323833 EXOC5O00471 708 aa21.03■□□□□ 0.96
TSFM-201ENST00000323833 TNS2Q63HR2 1409 aa21.03■□□□□ 0.96
TSFM-201ENST00000323833 FAM196AQ6ZSG2 479 aa21.02■□□□□ 0.96
TSFM-201ENST00000323833 MEGF6O75095 1541 aa21.01■□□□□ 0.95
TSFM-201ENST00000323833 EIF4A2Q14240 407 aaKnown RBP21.01■□□□□ 0.95
TSFM-201ENST00000323833 MARCH10Q8NA82 808 aaPredicted RBP21.01■□□□□ 0.95
TSFM-201ENST00000323833 CCDC125Q86Z20 511 aa21■□□□□ 0.95
TSFM-201ENST00000323833 OVOS2A0A0G2JMS6 1433 aa20.99■□□□□ 0.95
TSFM-201ENST00000323833 MTHFSP49914 203 aa20.99■□□□□ 0.95
TSFM-201ENST00000323833 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
TSFM-201ENST00000323833 EYA1Q99502 592 aa20.99■□□□□ 0.95
TSFM-201ENST00000323833 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
TSFM-201ENST00000323833 TRIM37O94972 964 aa20.97■□□□□ 0.95
TSFM-201ENST00000323833 SF3B2Q13435 895 aaKnown RBP20.96■□□□□ 0.95
TSFM-201ENST00000323833 RAPGEF4Q8WZA2 1011 aa20.96■□□□□ 0.95
TSFM-201ENST00000323833 PKD1L3Q7Z443 1732 aa20.95■□□□□ 0.94
TSFM-201ENST00000323833 TATP17735 454 aaPredicted RBP20.94■□□□□ 0.94
TSFM-201ENST00000323833 DEFB132Q7Z7B7 95 aa20.94■□□□□ 0.94
TSFM-201ENST00000323833 DDX54Q8TDD1 881 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms