RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 BRD4O60885 1362 aaPredicted RBP28.48■■■□□ 2.15
SSNA1-201ENST00000322310 ZBTB7AO95365 584 aa28.47■■■□□ 2.15
SSNA1-201ENST00000322310 PROM2Q8N271 834 aa28.47■■■□□ 2.15
SSNA1-201ENST00000322310 MARCH10Q8NA82 808 aaPredicted RBP28.47■■■□□ 2.15
SSNA1-201ENST00000322310 CABP1Q9NZU7 370 aa28.47■■■□□ 2.15
SSNA1-201ENST00000322310 AXIN2Q9Y2T1 843 aa28.46■■■□□ 2.15
SSNA1-201ENST00000322310 COL18A1P39060 1754 aa28.45■■■□□ 2.15
SSNA1-201ENST00000322310 WNK3Q9BYP7 1800 aa28.44■■■□□ 2.14
SSNA1-201ENST00000322310 PIK3C2AO00443 1686 aa28.44■■■□□ 2.14
SSNA1-201ENST00000322310 WDR17Q8IZU2 1322 aa28.43■■■□□ 2.14
SSNA1-201ENST00000322310 MYOM1P52179 1685 aa28.43■■■□□ 2.14
SSNA1-201ENST00000322310 QRICH2Q9H0J4 1663 aa28.42■■■□□ 2.14
SSNA1-201ENST00000322310 PTGER2P43116 358 aa28.41■■■□□ 2.14
SSNA1-201ENST00000322310 ATF5Q9Y2D1 282 aaPredicted RBP28.4■■■□□ 2.14
SSNA1-201ENST00000322310 CPSF1Q10570 1443 aaKnown RBP28.4■■■□□ 2.14
SSNA1-201ENST00000322310 UTRNP46939 3433 aa28.39■■■□□ 2.14
SSNA1-201ENST00000322310 BCL9O00512 1426 aa28.39■■■□□ 2.14
SSNA1-201ENST00000322310 AKAP12Q02952 1782 aa28.39■■■□□ 2.13
SSNA1-201ENST00000322310 SOX12O15370 315 aa28.37■■■□□ 2.13
SSNA1-201ENST00000322310 TXNRD1Q16881 649 aa28.37■■■□□ 2.13
SSNA1-201ENST00000322310 CDCA7Q9BWT1 371 aaPredicted RBP28.37■■■□□ 2.13
SSNA1-201ENST00000322310 ARHGEF25Q86VW2 580 aa28.36■■■□□ 2.13
SSNA1-201ENST00000322310 STK32BQ9NY57 414 aa28.35■■■□□ 2.13
SSNA1-201ENST00000322310 CSB-PGBD3P0DP91 1061 aa28.34■■■□□ 2.13
SSNA1-201ENST00000322310 CARD10Q9BWT7 1032 aa28.34■■■□□ 2.13
SSNA1-201ENST00000322310 RGPD5Q99666 1765 aa28.34■■■□□ 2.13
SSNA1-201ENST00000322310 SLC15A2Q16348 729 aa28.33■■■□□ 2.13
SSNA1-201ENST00000322310 ZNF784Q8NCA9 323 aaPredicted RBP28.33■■■□□ 2.13
SSNA1-201ENST00000322310 FHDC1Q9C0D6 1143 aaPredicted RBP28.33■■■□□ 2.13
SSNA1-201ENST00000322310 SYT17Q9BSW7 474 aa28.31■■■□□ 2.12
SSNA1-201ENST00000322310 TTC21BQ7Z4L5 1316 aa28.31■■■□□ 2.12
SSNA1-201ENST00000322310 EXOC5O00471 708 aa28.29■■■□□ 2.12
SSNA1-201ENST00000322310 KCNH5Q8NCM2 988 aa28.29■■■□□ 2.12
SSNA1-201ENST00000322310 EVC2Q86UK5 1308 aa28.28■■■□□ 2.12
SSNA1-201ENST00000322310 MTFR1LQ9H019 292 aa28.27■■■□□ 2.12
SSNA1-201ENST00000322310 NFAT5O94916 1531 aa28.27■■■□□ 2.12
SSNA1-201ENST00000322310 TNS2Q63HR2 1409 aa28.26■■■□□ 2.12
SSNA1-201ENST00000322310 SGIP1Q9BQI5 828 aa28.26■■■□□ 2.11
SSNA1-201ENST00000322310 TRPM1Q7Z4N2 1603 aa28.25■■■□□ 2.11
SSNA1-201ENST00000322310 CCDC7Q96M83 1385 aa28.24■■■□□ 2.11
SSNA1-201ENST00000322310 ACSBG1Q96GR2 724 aa28.24■■■□□ 2.11
SSNA1-201ENST00000322310 ZNF692Q9BU19 519 aaPredicted RBP28.24■■■□□ 2.11
SSNA1-201ENST00000322310 NHSQ6T4R5 1651 aa28.23■■■□□ 2.11
SSNA1-201ENST00000322310 TTC21AQ8NDW8 1320 aa28.22■■■□□ 2.11
SSNA1-201ENST00000322310 PAPPAQ13219 1627 aa28.18■■■□□ 2.1
SSNA1-201ENST00000322310 L3MBTL2Q969R5 705 aa28.18■■■□□ 2.1
SSNA1-201ENST00000322310 ARXQ96QS3 562 aa28.18■■■□□ 2.1
SSNA1-201ENST00000322310 KTN1Q86UP2 1357 aaKnown RBP28.18■■■□□ 2.1
SSNA1-201ENST00000322310 ABCC6O95255 1503 aa28.18■■■□□ 2.1
SSNA1-201ENST00000322310 ZNF827Q17R98 1081 aa28.15■■■□□ 2.1
SSNA1-201ENST00000322310 NLRP2Q9NX02 1062 aa28.15■■■□□ 2.1
SSNA1-201ENST00000322310 ERBB3P21860 1342 aa28.15■■■□□ 2.1
SSNA1-201ENST00000322310 SENP3-EIF4A1A0A087X0R7 540 aa28.14■■■□□ 2.1
SSNA1-201ENST00000322310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.13■■■□□ 2.09
SSNA1-201ENST00000322310 CHD4Q14839 1912 aa28.12■■■□□ 2.09
SSNA1-201ENST00000322310 BTAF1O14981 1849 aa28.12■■■□□ 2.09
SSNA1-201ENST00000322310 IL2RBP14784 551 aa28.11■■■□□ 2.09
SSNA1-201ENST00000322310 C1QTNF8P60827 252 aa28.11■■■□□ 2.09
SSNA1-201ENST00000322310 LRRC4BQ9NT99 713 aa28.11■■■□□ 2.09
SSNA1-201ENST00000322310 ROCK2O75116 1388 aaKnown RBP28.11■■■□□ 2.09
SSNA1-201ENST00000322310 MAP3K5Q99683 1374 aa28.11■■■□□ 2.09
SSNA1-201ENST00000322310 MON2Q7Z3U7 1717 aa28.1■■■□□ 2.09
SSNA1-201ENST00000322310 NME9Q86XW9 330 aa28.09■■■□□ 2.09
SSNA1-201ENST00000322310 USP31Q70CQ4 1352 aa28.08■■■□□ 2.09
SSNA1-201ENST00000322310 GPR162Q16538 588 aa28.06■■■□□ 2.08
SSNA1-201ENST00000322310 ANKRD24Q8TF21 1146 aa28.06■■■□□ 2.08
SSNA1-201ENST00000322310 LTN1O94822 1766 aa28.06■■■□□ 2.08
SSNA1-201ENST00000322310 KLHL34Q8N239 644 aa28.05■■■□□ 2.08
SSNA1-201ENST00000322310 USP54Q70EL1 1684 aa28.04■■■□□ 2.08
SSNA1-201ENST00000322310 CD163L1Q9NR16 1453 aa28.03■■■□□ 2.08
SSNA1-201ENST00000322310 SBNO2Q9Y2G9 1366 aa28.03■■■□□ 2.08
SSNA1-201ENST00000322310 AKT1S1Q96B36 256 aa28.03■■■□□ 2.08
SSNA1-201ENST00000322310 SIN3AQ96ST3 1273 aa28.03■■■□□ 2.08
SSNA1-201ENST00000322310 GOLGB1Q14789 3259 aaKnown RBP28.03■■■□□ 2.08
SSNA1-201ENST00000322310 PNPLA7Q6ZV29 1317 aa27.99■■■□□ 2.07
SSNA1-201ENST00000322310 KCNQ4P56696 695 aa27.99■■■□□ 2.07
SSNA1-201ENST00000322310 PELP1Q8IZL8 1130 aaKnown RBP27.99■■■□□ 2.07
SSNA1-201ENST00000322310 DDX54Q8TDD1 881 aaKnown RBP27.99■■■□□ 2.07
SSNA1-201ENST00000322310 KAT6BQ8WYB5 2073 aa27.98■■■□□ 2.07
SSNA1-201ENST00000322310 SLC27A3Q5K4L6 730 aa27.97■■■□□ 2.07
SSNA1-201ENST00000322310 TMC1Q8TDI8 760 aa27.97■■■□□ 2.07
SSNA1-201ENST00000322310 SLC16A10Q8TF71 515 aa27.97■■■□□ 2.07
SSNA1-201ENST00000322310 POLD1P28340 1107 aa27.96■■■□□ 2.07
SSNA1-201ENST00000322310 NEUROD1Q13562 356 aa27.96■■■□□ 2.07
SSNA1-201ENST00000322310 QSER1Q2KHR3 1735 aa27.95■■■□□ 2.07
SSNA1-201ENST00000322310 NLGN2Q8NFZ4 835 aa27.95■■■□□ 2.06
SSNA1-201ENST00000322310 GIGYF1O75420 1035 aaPredicted RBP27.94■■■□□ 2.06
SSNA1-201ENST00000322310 SLC12A5Q9H2X9 1139 aa27.94■■■□□ 2.06
SSNA1-201ENST00000322310 TFCP2L1Q9NZI6 479 aa27.94■■■□□ 2.06
SSNA1-201ENST00000322310 COL24A1Q17RW2 1714 aa27.93■■■□□ 2.06
SSNA1-201ENST00000322310 TUBGCP6Q96RT7 1819 aa27.93■■■□□ 2.06
SSNA1-201ENST00000322310 HDGFL2Q7Z4V5 671 aaPredicted RBP27.93■■■□□ 2.06
SSNA1-201ENST00000322310 SYTL4Q96C24 671 aaPredicted RBP27.93■■■□□ 2.06
SSNA1-201ENST00000322310 LTV1Q96GA3 475 aaPredicted RBP27.93■■■□□ 2.06
SSNA1-201ENST00000322310 EDC4Q6P2E9 1401 aaKnown RBP27.92■■■□□ 2.06
SSNA1-201ENST00000322310 PRIM1P49642 420 aaKnown RBP27.9■■■□□ 2.06
SSNA1-201ENST00000322310 IP6K1Q92551 441 aa27.9■■■□□ 2.06
SSNA1-201ENST00000322310 A0A1W2PP64 1363 aa27.89■■■□□ 2.06
SSNA1-201ENST00000322310 SHANK3Q9BYB0 1731 aa27.89■■■□□ 2.05
SSNA1-201ENST00000322310 DOT1LQ8TEK3 1739 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms