RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 ME1P48163 572 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 PANK2Q9BZ23 570 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 KIF6Q6ZMV9 814 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 RAI14Q9P0K7 980 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 MPHOSPH10O00566 681 aaKnown RBP10.55□□□□□ -0.72
SSBP2-201ENST00000320672 CCDC30Q5VVM6 783 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 CCAR1Q8IX12 1150 aaKnown RBP10.55□□□□□ -0.72
SSBP2-201ENST00000320672 CDK5RAP3Q96JB5 506 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 CCDC83Q8IWF9 413 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 TSPY26PQ9H489 355 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 FAM170AA1A519 330 aa10.54□□□□□ -0.72
SSBP2-201ENST00000320672 TNNT1P13805 278 aa10.54□□□□□ -0.72
SSBP2-201ENST00000320672 SRRTQ9BXP5 876 aaKnown RBP10.54□□□□□ -0.72
SSBP2-201ENST00000320672 BOLA2Q9H3K6 86 aa10.54□□□□□ -0.72
SSBP2-201ENST00000320672 SRGAP3O43295 1099 aa10.54□□□□□ -0.72
SSBP2-201ENST00000320672 OSCARQ8IYS5 282 aa10.54□□□□□ -0.72
SSBP2-201ENST00000320672 SETQ01105 290 aaPredicted RBP10.54□□□□□ -0.72
SSBP2-201ENST00000320672 CCDC70Q6NSX1 233 aa10.54□□□□□ -0.72
SSBP2-201ENST00000320672 GPTP24298 496 aa10.54□□□□□ -0.72
SSBP2-201ENST00000320672 TMEM57Q8N5G2 664 aa10.54□□□□□ -0.72
SSBP2-201ENST00000320672 CHMP4AQ9BY43 222 aa10.53□□□□□ -0.72
SSBP2-201ENST00000320672 MINDY4BA8MYZ0 360 aa10.53□□□□□ -0.72
SSBP2-201ENST00000320672 CPLX3Q8WVH0 158 aa10.53□□□□□ -0.72
SSBP2-201ENST00000320672 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
SSBP2-201ENST00000320672 TBC1D2BQ9UPU7 963 aa10.53□□□□□ -0.72
SSBP2-201ENST00000320672 NUCB2P80303 420 aa10.53□□□□□ -0.72
SSBP2-201ENST00000320672 AXDND1Q5T1B0 1012 aaPredicted RBP10.53□□□□□ -0.72
SSBP2-201ENST00000320672 GNAI2P04899 355 aa10.53□□□□□ -0.72
SSBP2-201ENST00000320672 HSP90AA4PQ58FG1 418 aa10.52□□□□□ -0.72
SSBP2-201ENST00000320672 TAX1BP1Q86VP1 789 aa10.52□□□□□ -0.72
SSBP2-201ENST00000320672 MYD88Q99836 296 aa10.52□□□□□ -0.72
SSBP2-201ENST00000320672 ATAD2BQ9ULI0 1458 aa10.52□□□□□ -0.72
SSBP2-201ENST00000320672 MPRIPQ6WCQ1 1025 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.73
SSBP2-201ENST00000320672 PDCL3Q9H2J4 239 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 KLHL10Q6JEL2 608 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 IGF1RP08069 1367 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 FANCIQ9NVI1 1328 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 BTBD11A6QL63 1104 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 TERF1P54274 439 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 CCDC158Q5M9N0 1113 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 NEFHP12036 1026 aa10.52□□□□□ -0.73
SSBP2-201ENST00000320672 TATP17735 454 aaPredicted RBP10.51□□□□□ -0.73
SSBP2-201ENST00000320672 LARP1BQ659C4 914 aaKnown RBP10.51□□□□□ -0.73
SSBP2-201ENST00000320672 FAM83GA6ND36 823 aa10.51□□□□□ -0.73
SSBP2-201ENST00000320672 SSR1P43307 286 aaKnown RBP10.51□□□□□ -0.73
SSBP2-201ENST00000320672 CCT2P78371 535 aaKnown RBP10.51□□□□□ -0.73
SSBP2-201ENST00000320672 GRM1Q13255 1194 aa10.51□□□□□ -0.73
SSBP2-201ENST00000320672 IQSEC3Q9UPP2 1182 aaPredicted RBP10.51□□□□□ -0.73
SSBP2-201ENST00000320672 PLEKHO1Q53GL0 409 aaPredicted RBP10.51□□□□□ -0.73
SSBP2-201ENST00000320672 PRPF40BQ6NWY9 871 aaKnown RBP10.51□□□□□ -0.73
SSBP2-201ENST00000320672 CCDC69A6NI79 296 aa10.51□□□□□ -0.73
SSBP2-201ENST00000320672 GPS2Q13227 327 aa10.51□□□□□ -0.73
SSBP2-201ENST00000320672 NME9Q86XW9 330 aa10.51□□□□□ -0.73
SSBP2-201ENST00000320672 ATP5J2-PTCD1G3V325 749 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 SYCE3A1L190 88 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 KINO60870 393 aaKnown RBP10.5□□□□□ -0.73
SSBP2-201ENST00000320672 TNMDQ9H2S6 317 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 TDO2P48775 406 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 LRRCC1Q9C099 1032 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 RBM27Q9P2N5 1060 aaKnown RBP10.5□□□□□ -0.73
SSBP2-201ENST00000320672 HSP90AB3PQ58FF7 597 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 TSPYL1Q9H0U9 437 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 VAT1LQ9HCJ6 419 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 TFIP11Q9UBB9 837 aaKnown RBP10.5□□□□□ -0.73
SSBP2-201ENST00000320672 EMILIN1Q9Y6C2 1016 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 KIF21BO75037 1637 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 MPHOSPH8Q99549 860 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.5□□□□□ -0.73
SSBP2-201ENST00000320672 TCEANC2Q96MN5 208 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 TRMT1Q9NXH9 659 aaKnown RBP10.5□□□□□ -0.73
SSBP2-201ENST00000320672 CNTLNQ9NXG0 1405 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 PPARDQ03181 441 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 PDRG1Q9NUG6 133 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 TNNQ9UQP3 1299 aa10.5□□□□□ -0.73
SSBP2-201ENST00000320672 HAND2P61296 217 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 MAP7D2Q96T17 732 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 LRRFIP1Q32MZ4 808 aaKnown RBP10.49□□□□□ -0.73
SSBP2-201ENST00000320672 BRMS1Q9HCU9 246 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 BIN1O00499 593 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 WDR78Q5VTH9 848 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 SRCIN1Q9C0H9 1055 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 HOOK1Q9UJC3 728 aaKnown RBP10.49□□□□□ -0.73
SSBP2-201ENST00000320672 CASTP20810 708 aaKnown RBP10.49□□□□□ -0.73
SSBP2-201ENST00000320672 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 SPG7Q9UQ90 795 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 CHRNA2Q15822 529 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 CHD1LQ86WJ1 897 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 LRP2BPQ9P2M1 347 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 CYP46A1Q9Y6A2 500 aa10.49□□□□□ -0.73
SSBP2-201ENST00000320672 CADPSQ9ULU8 1353 aa10.48□□□□□ -0.73
SSBP2-201ENST00000320672 PSMD1Q99460 953 aa10.48□□□□□ -0.73
SSBP2-201ENST00000320672 H0YHG0 523 aa10.48□□□□□ -0.73
SSBP2-201ENST00000320672 CKAP2LQ8IYA6 745 aa10.48□□□□□ -0.73
SSBP2-201ENST00000320672 DEF6Q9H4E7 631 aa10.48□□□□□ -0.73
SSBP2-201ENST00000320672 MAGEC2Q9UBF1 373 aaPredicted RBP10.48□□□□□ -0.73
SSBP2-201ENST00000320672 HSP90AB4PQ58FF6 505 aa10.48□□□□□ -0.73
SSBP2-201ENST00000320672 LRRC2Q9BYS8 371 aa10.48□□□□□ -0.73
SSBP2-201ENST00000320672 CCDC57Q2TAC2 916 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms