RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 SOX12O15370 315 aa13.91□□□□□ -0.18
CCDC65-202ENST00000320516 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
CCDC65-202ENST00000320516 USP35Q9P2H5 1018 aa13.91□□□□□ -0.18
CCDC65-202ENST00000320516 BLMP54132 1417 aaPredicted RBP13.9□□□□□ -0.18
CCDC65-202ENST00000320516 CRB1P82279 1406 aa13.9□□□□□ -0.18
CCDC65-202ENST00000320516 CDCA8Q53HL2 280 aa13.9□□□□□ -0.18
CCDC65-202ENST00000320516 THRAP3Q9Y2W1 955 aaKnown RBP13.9□□□□□ -0.18
CCDC65-202ENST00000320516 ABCC6O95255 1503 aa13.9□□□□□ -0.18
CCDC65-202ENST00000320516 WDR17Q8IZU2 1322 aa13.88□□□□□ -0.19
CCDC65-202ENST00000320516 RGPD5Q99666 1765 aa13.87□□□□□ -0.19
CCDC65-202ENST00000320516 MYOM1P52179 1685 aa13.87□□□□□ -0.19
CCDC65-202ENST00000320516 FAM182BQ5T319 152 aa13.86□□□□□ -0.19
CCDC65-202ENST00000320516 EIF4G2P78344 907 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC65-202ENST00000320516 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
CCDC65-202ENST00000320516 PARP4Q9UKK3 1724 aaKnown RBP13.85□□□□□ -0.19
CCDC65-202ENST00000320516 LTN1O94822 1766 aa13.85□□□□□ -0.19
CCDC65-202ENST00000320516 FYB1O15117 783 aa13.84□□□□□ -0.19
CCDC65-202ENST00000320516 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
CCDC65-202ENST00000320516 DEFB132Q7Z7B7 95 aa13.84□□□□□ -0.19
CCDC65-202ENST00000320516 CARD10Q9BWT7 1032 aa13.84□□□□□ -0.19
CCDC65-202ENST00000320516 ERBB3P21860 1342 aa13.84□□□□□ -0.19
CCDC65-202ENST00000320516 COG3Q96JB2 828 aa13.83□□□□□ -0.19
CCDC65-202ENST00000320516 CARD14Q9BXL6 1004 aa13.83□□□□□ -0.19
CCDC65-202ENST00000320516 PDE3BQ13370 1112 aa13.83□□□□□ -0.2
CCDC65-202ENST00000320516 FAM196AQ6ZSG2 479 aa13.83□□□□□ -0.2
CCDC65-202ENST00000320516 DISP2A7MBM2 1401 aa13.82□□□□□ -0.2
CCDC65-202ENST00000320516 CSB-PGBD3P0DP91 1061 aa13.82□□□□□ -0.2
CCDC65-202ENST00000320516 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
CCDC65-202ENST00000320516 WNK3Q9BYP7 1800 aa13.82□□□□□ -0.2
CCDC65-202ENST00000320516 LRRC37A3O60309 1634 aa13.81□□□□□ -0.2
CCDC65-202ENST00000320516 FBLN1P23142 703 aa13.81□□□□□ -0.2
CCDC65-202ENST00000320516 IP6K1Q92551 441 aa13.81□□□□□ -0.2
CCDC65-202ENST00000320516 GGNBP2Q9H3C7 697 aa13.81□□□□□ -0.2
CCDC65-202ENST00000320516 RGPD1P0DJD0 1748 aa13.81□□□□□ -0.2
CCDC65-202ENST00000320516 CCDC7Q96M83 1385 aa13.81□□□□□ -0.2
CCDC65-202ENST00000320516 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
CCDC65-202ENST00000320516 CDCA7Q9BWT1 371 aaPredicted RBP13.8□□□□□ -0.2
CCDC65-202ENST00000320516 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
CCDC65-202ENST00000320516 TNS1Q9HBL0 1735 aaKnown RBP13.8□□□□□ -0.2
CCDC65-202ENST00000320516 PEAK1Q9H792 1746 aa13.79□□□□□ -0.2
CCDC65-202ENST00000320516 DDB1Q16531 1140 aa13.79□□□□□ -0.2
CCDC65-202ENST00000320516 ANKRD24Q8TF21 1146 aa13.79□□□□□ -0.2
CCDC65-202ENST00000320516 KIF20BQ96Q89 1820 aa13.79□□□□□ -0.2
CCDC65-202ENST00000320516 BAG6P46379 1132 aa13.78□□□□□ -0.2
CCDC65-202ENST00000320516 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
CCDC65-202ENST00000320516 TRIM37O94972 964 aa13.78□□□□□ -0.2
CCDC65-202ENST00000320516 HOXC9P31274 260 aa13.78□□□□□ -0.2
CCDC65-202ENST00000320516 NLRP2Q9NX02 1062 aa13.77□□□□□ -0.21
CCDC65-202ENST00000320516 OVOS2A0A0G2JMS6 1433 aa13.77□□□□□ -0.21
CCDC65-202ENST00000320516 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
CCDC65-202ENST00000320516 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
CCDC65-202ENST00000320516 MARCH10Q8NA82 808 aaPredicted RBP13.76□□□□□ -0.21
CCDC65-202ENST00000320516 RTL1A6NKG5 1358 aa13.76□□□□□ -0.21
CCDC65-202ENST00000320516 AMPHP49418 695 aa13.76□□□□□ -0.21
CCDC65-202ENST00000320516 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
CCDC65-202ENST00000320516 BCL9O00512 1426 aa13.75□□□□□ -0.21
CCDC65-202ENST00000320516 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
CCDC65-202ENST00000320516 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
CCDC65-202ENST00000320516 EXOC5O00471 708 aa13.74□□□□□ -0.21
CCDC65-202ENST00000320516 CAMKK2Q96RR4 588 aa13.74□□□□□ -0.21
CCDC65-202ENST00000320516 KIF24Q5T7B8 1368 aa13.73□□□□□ -0.21
CCDC65-202ENST00000320516 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
CCDC65-202ENST00000320516 IL2RBP14784 551 aa13.73□□□□□ -0.21
CCDC65-202ENST00000320516 LTV1Q96GA3 475 aaPredicted RBP13.73□□□□□ -0.21
CCDC65-202ENST00000320516 APBA3O96018 575 aa13.73□□□□□ -0.21
CCDC65-202ENST00000320516 EZH2Q15910 746 aaKnown RBP13.73□□□□□ -0.21
CCDC65-202ENST00000320516 PANK3Q9H999 370 aa13.73□□□□□ -0.21
CCDC65-202ENST00000320516 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
CCDC65-202ENST00000320516 SRCAPQ6ZRS2 3230 aa13.72□□□□□ -0.21
CCDC65-202ENST00000320516 INSRP06213 1382 aa13.71□□□□□ -0.21
CCDC65-202ENST00000320516 FLT4P35916 1363 aa13.71□□□□□ -0.21
CCDC65-202ENST00000320516 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.21
CCDC65-202ENST00000320516 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.21
CCDC65-202ENST00000320516 PTF1AQ7RTS3 328 aa13.71□□□□□ -0.22
CCDC65-202ENST00000320516 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
CCDC65-202ENST00000320516 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
CCDC65-202ENST00000320516 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
CCDC65-202ENST00000320516 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
CCDC65-202ENST00000320516 EMILIN1Q9Y6C2 1016 aa13.7□□□□□ -0.22
CCDC65-202ENST00000320516 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
CCDC65-202ENST00000320516 BCL11BQ9C0K0 894 aaPredicted RBP13.69□□□□□ -0.22
CCDC65-202ENST00000320516 RREB1Q92766 1687 aa13.69□□□□□ -0.22
CCDC65-202ENST00000320516 MEGF6O75095 1541 aa13.67□□□□□ -0.22
CCDC65-202ENST00000320516 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
CCDC65-202ENST00000320516 PLSCR1O15162 318 aa13.67□□□□□ -0.22
CCDC65-202ENST00000320516 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
CCDC65-202ENST00000320516 RGPD3A6NKT7 1758 aaPredicted RBP13.67□□□□□ -0.22
CCDC65-202ENST00000320516 RGPD4Q7Z3J3 1758 aa13.67□□□□□ -0.22
CCDC65-202ENST00000320516 NSD2O96028 1365 aa13.67□□□□□ -0.22
CCDC65-202ENST00000320516 WASHC2AQ641Q2 1341 aa13.67□□□□□ -0.22
CCDC65-202ENST00000320516 MAP2P11137 1827 aaKnown RBP13.66□□□□□ -0.22
CCDC65-202ENST00000320516 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
CCDC65-202ENST00000320516 KCNQ2O43526 872 aa13.66□□□□□ -0.22
CCDC65-202ENST00000320516 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
CCDC65-202ENST00000320516 PSDA5PKW4 1024 aaPredicted RBP13.65□□□□□ -0.22
CCDC65-202ENST00000320516 USHBP1Q8N6Y0 703 aa13.65□□□□□ -0.22
CCDC65-202ENST00000320516 NHSQ6T4R5 1651 aa13.65□□□□□ -0.22
CCDC65-202ENST00000320516 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
CCDC65-202ENST00000320516 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
CCDC65-202ENST00000320516 PROM2Q8N271 834 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms