RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 TTC16Q8NEE8 873 aa15.48■□□□□ 0.07
AFF3-201ENST00000317233 VPS36Q86VN1 386 aa15.47■□□□□ 0.07
AFF3-201ENST00000317233 EIF5P55010 431 aaKnown RBP15.47■□□□□ 0.07
AFF3-201ENST00000317233 TTC39AQ5SRH9 613 aa15.47■□□□□ 0.07
AFF3-201ENST00000317233 CAVIN1Q6NZI2 390 aaKnown RBP15.47■□□□□ 0.07
AFF3-201ENST00000317233 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
AFF3-201ENST00000317233 MAP9Q49MG5 647 aa15.47■□□□□ 0.07
AFF3-201ENST00000317233 MACROD2A1Z1Q3 448 aa15.46■□□□□ 0.07
AFF3-201ENST00000317233 SH3BP5O60239 455 aa15.46■□□□□ 0.07
AFF3-201ENST00000317233 ZMYND15Q9H091 742 aa15.46■□□□□ 0.07
AFF3-201ENST00000317233 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.07
AFF3-201ENST00000317233 NLRP13Q86W25 1043 aa15.46■□□□□ 0.06
AFF3-201ENST00000317233 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
AFF3-201ENST00000317233 CEP135Q66GS9 1140 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 RNF214Q8ND24 703 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 PRPF31Q8WWY3 499 aaKnown RBP15.45■□□□□ 0.06
AFF3-201ENST00000317233 CCDC158Q5M9N0 1113 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 FSD2A1L4K1 749 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 TSPYL4Q9UJ04 414 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 LMAN1P49257 510 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 PPP1R14CQ8TAE6 165 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 CEP57L1Q8IYX8 460 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 TSPY26PQ9H489 355 aa15.45■□□□□ 0.06
AFF3-201ENST00000317233 UBTFL1P0CB47 393 aaPredicted RBP15.44■□□□□ 0.06
AFF3-201ENST00000317233 TMOD2Q9NZR1 351 aa15.44■□□□□ 0.06
AFF3-201ENST00000317233 ODF2LQ9ULJ1 636 aa15.44■□□□□ 0.06
AFF3-201ENST00000317233 SEPT10Q9P0V9 454 aa15.44■□□□□ 0.06
AFF3-201ENST00000317233 EVC2Q86UK5 1308 aa15.44■□□□□ 0.06
AFF3-201ENST00000317233 TTLL12Q14166 644 aaPredicted RBP15.44■□□□□ 0.06
AFF3-201ENST00000317233 ME1P48163 572 aa15.44■□□□□ 0.06
AFF3-201ENST00000317233 MCM3P25205 808 aa15.44■□□□□ 0.06
AFF3-201ENST00000317233 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
AFF3-201ENST00000317233 TRAK1Q9UPV9 953 aa15.43■□□□□ 0.06
AFF3-201ENST00000317233 IKBKGQ9Y6K9 419 aa15.43■□□□□ 0.06
AFF3-201ENST00000317233 WDR78Q5VTH9 848 aa15.43■□□□□ 0.06
AFF3-201ENST00000317233 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
AFF3-201ENST00000317233 USP5P45974 858 aa15.43■□□□□ 0.06
AFF3-201ENST00000317233 GON4LQ3T8J9 2241 aa15.43■□□□□ 0.06
AFF3-201ENST00000317233 UQCRHLA0A096LP55 91 aa15.43■□□□□ 0.06
AFF3-201ENST00000317233 MBD3O95983 291 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 CCDC192P0DO97 292 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 SPA17Q15506 151 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 CCDC178Q5BJE1 867 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 MICALCLQ6ZW33 695 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 SEPT6Q14141 434 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 LUZP1Q86V48 1076 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 ZNF354CQ86Y25 554 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 NUP133Q8WUM0 1156 aa15.42■□□□□ 0.06
AFF3-201ENST00000317233 NUP155O75694 1391 aa15.41■□□□□ 0.06
AFF3-201ENST00000317233 PSMC4P43686 418 aa15.41■□□□□ 0.06
AFF3-201ENST00000317233 CFAP58Q5T655 872 aa15.41■□□□□ 0.06
AFF3-201ENST00000317233 APBB1IPQ7Z5R6 666 aaPredicted RBP15.41■□□□□ 0.06
AFF3-201ENST00000317233 SPECC1Q5M775 1068 aa15.41■□□□□ 0.06
AFF3-201ENST00000317233 CDKL5O76039 1030 aa15.41■□□□□ 0.06
AFF3-201ENST00000317233 HMGB2P26583 209 aaKnown RBP15.41■□□□□ 0.06
AFF3-201ENST00000317233 UACAQ9BZF9 1416 aa15.41■□□□□ 0.06
AFF3-201ENST00000317233 ANKRD1Q15327 319 aa15.41■□□□□ 0.06
AFF3-201ENST00000317233 SEC63Q9UGP8 760 aaKnown RBP15.41■□□□□ 0.06
AFF3-201ENST00000317233 GBP3Q9H0R5 595 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 MCM2P49736 904 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 ARHGAP29Q52LW3 1261 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 TNMDQ9H2S6 317 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 NDC80O14777 642 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 MPHOSPH8Q99549 860 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 CCDC160A6NGH7 325 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 ZNF287Q9HBT7 754 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 CRBNQ96SW2 442 aa15.4■□□□□ 0.06
AFF3-201ENST00000317233 MKRN1Q9UHC7 482 aaKnown RBP15.4■□□□□ 0.06
AFF3-201ENST00000317233 ACTN2P35609 894 aa15.39■□□□□ 0.05
AFF3-201ENST00000317233 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
AFF3-201ENST00000317233 FGFR1OPO95684 399 aaKnown RBP15.39■□□□□ 0.05
AFF3-201ENST00000317233 MAP7D1Q3KQU3 841 aa15.39■□□□□ 0.05
AFF3-201ENST00000317233 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
AFF3-201ENST00000317233 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 TTC36A6NLP5 189 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 NOL3O60936 208 aaKnown RBP15.38■□□□□ 0.05
AFF3-201ENST00000317233 CCDC6Q16204 474 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 TSG101Q99816 390 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 EFCAB2Q5VUJ9 269 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 ERICH4A6NGS2 130 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 SATB1Q01826 763 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 PDE4AP27815 886 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 SPECC1LQ69YQ0 1117 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 COG6Q9Y2V7 657 aa15.38■□□□□ 0.05
AFF3-201ENST00000317233 KIF15Q9NS87 1388 aa15.37■□□□□ 0.05
AFF3-201ENST00000317233 CETN1Q12798 172 aa15.37■□□□□ 0.05
AFF3-201ENST00000317233 HMGB1P1B2RPK0 211 aaPredicted RBP15.37■□□□□ 0.05
AFF3-201ENST00000317233 NLRP2Q9NX02 1062 aa15.37■□□□□ 0.05
AFF3-201ENST00000317233 TPD52P55327 224 aaPredicted RBP15.37■□□□□ 0.05
AFF3-201ENST00000317233 ANAPC4Q9UJX5 808 aa15.37■□□□□ 0.05
AFF3-201ENST00000317233 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
AFF3-201ENST00000317233 RNF187Q5TA31 235 aaPredicted RBP15.37■□□□□ 0.05
AFF3-201ENST00000317233 SMC1BQ8NDV3 1235 aa15.37■□□□□ 0.05
AFF3-201ENST00000317233 UBAC1Q9BSL1 405 aa15.37■□□□□ 0.05
AFF3-201ENST00000317233 CEP131Q9UPN4 1083 aa15.37■□□□□ 0.05
AFF3-201ENST00000317233 RIPK4P57078 832 aa15.36■□□□□ 0.05
AFF3-201ENST00000317233 FAM107BQ9H098 131 aa15.36■□□□□ 0.05
AFF3-201ENST00000317233 MRE11P49959 708 aa15.36■□□□□ 0.05
AFF3-201ENST00000317233 OTUD6BQ8N6M0 293 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms