RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 IP6K1Q92551 441 aa21.51■■□□□ 1.03
TUBB3-201ENST00000315491 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
TUBB3-201ENST00000315491 ADAMTS8Q9UP79 889 aa21.51■■□□□ 1.03
TUBB3-201ENST00000315491 COL22A1Q8NFW1 1626 aaPredicted RBP21.51■■□□□ 1.03
TUBB3-201ENST00000315491 IL13P35225 146 aa21.51■■□□□ 1.03
TUBB3-201ENST00000315491 CPDO75976 1380 aa21.5■■□□□ 1.03
TUBB3-201ENST00000315491 ABCA3Q99758 1704 aa21.5■■□□□ 1.03
TUBB3-201ENST00000315491 U2SURPO15042 1029 aaKnown RBP21.49■■□□□ 1.03
TUBB3-201ENST00000315491 EIF4A2Q14240 407 aaKnown RBP21.49■■□□□ 1.03
TUBB3-201ENST00000315491 U2AF1L5P0DN76 240 aaPredicted RBP21.48■■□□□ 1.03
TUBB3-201ENST00000315491 U2AF1Q01081 240 aaKnown RBP eCLIP21.48■■□□□ 1.03
TUBB3-201ENST00000315491 KIAA0232Q92628 1395 aa21.47■■□□□ 1.03
TUBB3-201ENST00000315491 BLMP54132 1417 aaPredicted RBP21.45■■□□□ 1.02
TUBB3-201ENST00000315491 PRDM11Q9NQV5 511 aa21.44■■□□□ 1.02
TUBB3-201ENST00000315491 JCADQ9P266 1359 aa21.44■■□□□ 1.02
TUBB3-201ENST00000315491 ABCC6O95255 1503 aa21.44■■□□□ 1.02
TUBB3-201ENST00000315491 CHRNA2Q15822 529 aa21.43■■□□□ 1.02
TUBB3-201ENST00000315491 HSPA1LP34931 641 aa21.43■■□□□ 1.02
TUBB3-201ENST00000315491 LTV1Q96GA3 475 aaPredicted RBP21.43■■□□□ 1.02
TUBB3-201ENST00000315491 AXIN2Q9Y2T1 843 aa21.43■■□□□ 1.02
TUBB3-201ENST00000315491 COL18A1P39060 1754 aa21.42■■□□□ 1.02
TUBB3-201ENST00000315491 HNRNPUQ00839 825 aaKnown RBP eCLIP21.41■■□□□ 1.02
TUBB3-201ENST00000315491 CCDC146Q8IYE0 955 aa21.41■■□□□ 1.02
TUBB3-201ENST00000315491 ANKRD24Q8TF21 1146 aa21.4■■□□□ 1.02
TUBB3-201ENST00000315491 EYA1Q99502 592 aa21.39■■□□□ 1.01
TUBB3-201ENST00000315491 RGPD1P0DJD0 1748 aa21.39■■□□□ 1.01
TUBB3-201ENST00000315491 FCHSD2O94868 740 aa21.38■■□□□ 1.01
TUBB3-201ENST00000315491 HMOX1P09601 288 aa21.38■■□□□ 1.01
TUBB3-201ENST00000315491 IGSF1Q8N6C5 1336 aa21.38■■□□□ 1.01
TUBB3-201ENST00000315491 RUNDC1Q96C34 613 aa21.38■■□□□ 1.01
TUBB3-201ENST00000315491 RSPH6AQ9H0K4 717 aa21.38■■□□□ 1.01
TUBB3-201ENST00000315491 PNNQ9H307 717 aaKnown RBP21.38■■□□□ 1.01
TUBB3-201ENST00000315491 ERBB3P21860 1342 aa21.37■■□□□ 1.01
TUBB3-201ENST00000315491 FAM83GA6ND36 823 aa21.37■■□□□ 1.01
TUBB3-201ENST00000315491 SULT6B1Q6IMI4 303 aa21.37■■□□□ 1.01
TUBB3-201ENST00000315491 LMO7Q8WWI1 1683 aa21.37■■□□□ 1.01
TUBB3-201ENST00000315491 NUTM2BA6NNL0 878 aaPredicted RBP21.36■■□□□ 1.01
TUBB3-201ENST00000315491 NUTM2EB1AL46 878 aaPredicted RBP21.36■■□□□ 1.01
TUBB3-201ENST00000315491 NUTM2AQ8IVF1 878 aaPredicted RBP21.36■■□□□ 1.01
TUBB3-201ENST00000315491 PLEKHF1Q96S99 279 aa21.36■■□□□ 1.01
TUBB3-201ENST00000315491 RGPD5Q99666 1765 aa21.35■■□□□ 1.01
TUBB3-201ENST00000315491 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
TUBB3-201ENST00000315491 AEBP1Q8IUX7 1158 aa21.35■■□□□ 1.01
TUBB3-201ENST00000315491 CAMTA1Q9Y6Y1 1673 aa21.35■■□□□ 1.01
TUBB3-201ENST00000315491 SPATA31A6Q5VVP1 1343 aa21.34■■□□□ 1.01
TUBB3-201ENST00000315491 ADAMTS2O95450 1211 aa21.34■■□□□ 1.01
TUBB3-201ENST00000315491 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1.01
TUBB3-201ENST00000315491 NBPF6Q5VWK0 638 aa21.33■■□□□ 1.01
TUBB3-201ENST00000315491 NBPF4Q96M43 638 aa21.33■■□□□ 1.01
TUBB3-201ENST00000315491 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1.01
TUBB3-201ENST00000315491 KDRP35968 1356 aa21.33■■□□□ 1
TUBB3-201ENST00000315491 APAF1O14727 1248 aa21.33■■□□□ 1
TUBB3-201ENST00000315491 CSB-PGBD3P0DP91 1061 aa21.33■■□□□ 1
TUBB3-201ENST00000315491 MAPK8IP3Q9UPT6 1336 aa21.32■■□□□ 1
TUBB3-201ENST00000315491 COL5A2P05997 1499 aaPredicted RBP21.32■■□□□ 1
TUBB3-201ENST00000315491 NEFMP07197 916 aa21.31■■□□□ 1
TUBB3-201ENST00000315491 USHBP1Q8N6Y0 703 aa21.31■■□□□ 1
TUBB3-201ENST00000315491 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
TUBB3-201ENST00000315491 NCAPD2Q15021 1401 aa21.3■■□□□ 1
TUBB3-201ENST00000315491 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
TUBB3-201ENST00000315491 BTG4Q9NY30 223 aa21.3■■□□□ 1
TUBB3-201ENST00000315491 NLRP2Q9NX02 1062 aa21.29■■□□□ 1
TUBB3-201ENST00000315491 WDR17Q8IZU2 1322 aa21.29■■□□□ 1
TUBB3-201ENST00000315491 FAM208AQ9UK61 1670 aaKnown RBP21.29■■□□□ 1
TUBB3-201ENST00000315491 EVA1CP58658 441 aa21.28■■□□□ 1
TUBB3-201ENST00000315491 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
TUBB3-201ENST00000315491 RGPD2P0DJD1 1756 aa21.28■■□□□ 1
TUBB3-201ENST00000315491 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
TUBB3-201ENST00000315491 STRN4Q9NRL3 753 aa21.28■■□□□ 1
TUBB3-201ENST00000315491 LRP6O75581 1613 aa21.26■□□□□ 0.99
TUBB3-201ENST00000315491 NGEFQ8N5V2 710 aa21.26■□□□□ 0.99
TUBB3-201ENST00000315491 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
TUBB3-201ENST00000315491 RRP7AQ9Y3A4 280 aaKnown RBP21.25■□□□□ 0.99
TUBB3-201ENST00000315491 TMPOP42166 694 aaKnown RBP21.25■□□□□ 0.99
TUBB3-201ENST00000315491 PLCH1Q4KWH8 1693 aa21.25■□□□□ 0.99
TUBB3-201ENST00000315491 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
TUBB3-201ENST00000315491 LARP1Q6PKG0 1096 aaKnown RBP21.24■□□□□ 0.99
TUBB3-201ENST00000315491 NEUROD2Q15784 382 aa21.23■□□□□ 0.99
TUBB3-201ENST00000315491 NCBP3Q53F19 620 aaKnown RBP21.23■□□□□ 0.99
TUBB3-201ENST00000315491 NFE2L2Q16236 605 aa21.23■□□□□ 0.99
TUBB3-201ENST00000315491 CARD10Q9BWT7 1032 aa21.23■□□□□ 0.99
TUBB3-201ENST00000315491 SLIT2O94813 1529 aa21.22■□□□□ 0.99
TUBB3-201ENST00000315491 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
TUBB3-201ENST00000315491 CRB1P82279 1406 aa21.22■□□□□ 0.99
TUBB3-201ENST00000315491 RIPK4P57078 832 aa21.2■□□□□ 0.99
TUBB3-201ENST00000315491 NGLY1Q96IV0 654 aa21.2■□□□□ 0.99
TUBB3-201ENST00000315491 NWD2Q9ULI1 1742 aa21.2■□□□□ 0.98
TUBB3-201ENST00000315491 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
TUBB3-201ENST00000315491 MEX3CQ5U5Q3 659 aaKnown RBP21.2■□□□□ 0.98
TUBB3-201ENST00000315491 NRAPQ86VF7 1730 aa21.19■□□□□ 0.98
TUBB3-201ENST00000315491 MTHFSDQ2M296 383 aaKnown RBP21.19■□□□□ 0.98
TUBB3-201ENST00000315491 GAS2L2Q8NHY3 880 aa21.19■□□□□ 0.98
TUBB3-201ENST00000315491 RAPGEF4Q8WZA2 1011 aa21.19■□□□□ 0.98
TUBB3-201ENST00000315491 ZNF521Q96K83 1311 aa21.19■□□□□ 0.98
TUBB3-201ENST00000315491 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
TUBB3-201ENST00000315491 TATP17735 454 aaPredicted RBP21.18■□□□□ 0.98
TUBB3-201ENST00000315491 PLEKHO1Q53GL0 409 aaPredicted RBP21.17■□□□□ 0.98
TUBB3-201ENST00000315491 WWC1Q8IX03 1113 aa21.17■□□□□ 0.98
TUBB3-201ENST00000315491 FNBP4Q8N3X1 1017 aaPredicted RBP21.17■□□□□ 0.98
TUBB3-201ENST00000315491 TRIM35Q9UPQ4 493 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms