RNA–Protein interactions for RNA: ENST00000315274.6

MMP1-201, Transcript of matrix metallopeptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP1, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1-201ENST00000315274 SPATA31A6Q5VVP1 1343 aa12.78□□□□□ -0.36
MMP1-201ENST00000315274 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
MMP1-201ENST00000315274 PEAK1Q9H792 1746 aa12.78□□□□□ -0.36
MMP1-201ENST00000315274 CPDO75976 1380 aa12.77□□□□□ -0.36
MMP1-201ENST00000315274 DIAPH1O60610 1272 aaKnown RBP12.77□□□□□ -0.37
MMP1-201ENST00000315274 RGPD5Q99666 1765 aa12.77□□□□□ -0.37
MMP1-201ENST00000315274 SMG6Q86US8 1419 aaKnown RBP12.77□□□□□ -0.37
MMP1-201ENST00000315274 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
MMP1-201ENST00000315274 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
MMP1-201ENST00000315274 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
MMP1-201ENST00000315274 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
MMP1-201ENST00000315274 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
MMP1-201ENST00000315274 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
MMP1-201ENST00000315274 EIF4A2Q14240 407 aaKnown RBP12.75□□□□□ -0.37
MMP1-201ENST00000315274 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
MMP1-201ENST00000315274 C8orf37Q96NL8 207 aa12.75□□□□□ -0.37
MMP1-201ENST00000315274 BTG4Q9NY30 223 aa12.75□□□□□ -0.37
MMP1-201ENST00000315274 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
MMP1-201ENST00000315274 INSRP06213 1382 aa12.74□□□□□ -0.37
MMP1-201ENST00000315274 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
MMP1-201ENST00000315274 EVA1CP58658 441 aa12.74□□□□□ -0.37
MMP1-201ENST00000315274 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
MMP1-201ENST00000315274 ANKRD24Q8TF21 1146 aa12.74□□□□□ -0.37
MMP1-201ENST00000315274 COL18A1P39060 1754 aa12.74□□□□□ -0.37
MMP1-201ENST00000315274 IL13P35225 146 aa12.74□□□□□ -0.37
MMP1-201ENST00000315274 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
MMP1-201ENST00000315274 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
MMP1-201ENST00000315274 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
MMP1-201ENST00000315274 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
MMP1-201ENST00000315274 BLMP54132 1417 aaPredicted RBP12.72□□□□□ -0.37
MMP1-201ENST00000315274 LRP6O75581 1613 aa12.72□□□□□ -0.37
MMP1-201ENST00000315274 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
MMP1-201ENST00000315274 CAMTA1Q9Y6Y1 1673 aa12.72□□□□□ -0.37
MMP1-201ENST00000315274 COL14A1Q05707 1796 aaKnown RBP12.72□□□□□ -0.37
MMP1-201ENST00000315274 EYA1Q99502 592 aa12.71□□□□□ -0.37
MMP1-201ENST00000315274 NLRP2Q9NX02 1062 aa12.71□□□□□ -0.37
MMP1-201ENST00000315274 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
MMP1-201ENST00000315274 ERBB3P21860 1342 aa12.71□□□□□ -0.37
MMP1-201ENST00000315274 HMOX1P09601 288 aa12.7□□□□□ -0.38
MMP1-201ENST00000315274 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
MMP1-201ENST00000315274 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
MMP1-201ENST00000315274 USHBP1Q8N6Y0 703 aa12.7□□□□□ -0.38
MMP1-201ENST00000315274 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
MMP1-201ENST00000315274 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
MMP1-201ENST00000315274 RGPD2P0DJD1 1756 aa12.7□□□□□ -0.38
MMP1-201ENST00000315274 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
MMP1-201ENST00000315274 LARP1Q6PKG0 1096 aaKnown RBP12.69□□□□□ -0.38
MMP1-201ENST00000315274 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
MMP1-201ENST00000315274 ABCC6O95255 1503 aa12.69□□□□□ -0.38
MMP1-201ENST00000315274 PLCH1Q4KWH8 1693 aa12.69□□□□□ -0.38
MMP1-201ENST00000315274 USP35Q9P2H5 1018 aa12.69□□□□□ -0.38
MMP1-201ENST00000315274 WDR17Q8IZU2 1322 aa12.69□□□□□ -0.38
MMP1-201ENST00000315274 COL5A2P05997 1499 aaPredicted RBP12.68□□□□□ -0.38
MMP1-201ENST00000315274 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
MMP1-201ENST00000315274 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
MMP1-201ENST00000315274 USP21Q9UK80 565 aa12.67□□□□□ -0.38
MMP1-201ENST00000315274 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
MMP1-201ENST00000315274 AFF2P51816 1311 aa12.67□□□□□ -0.38
MMP1-201ENST00000315274 IGSF1Q8N6C5 1336 aa12.67□□□□□ -0.38
MMP1-201ENST00000315274 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
MMP1-201ENST00000315274 CCDC146Q8IYE0 955 aa12.67□□□□□ -0.38
MMP1-201ENST00000315274 SLIT2O94813 1529 aa12.66□□□□□ -0.38
MMP1-201ENST00000315274 SENP3-EIF4A1A0A087X0R7 540 aa12.66□□□□□ -0.38
MMP1-201ENST00000315274 FCHSD2O94868 740 aa12.66□□□□□ -0.38
MMP1-201ENST00000315274 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
MMP1-201ENST00000315274 PRKAR2BP31323 418 aa12.65□□□□□ -0.38
MMP1-201ENST00000315274 CARD10Q9BWT7 1032 aa12.65□□□□□ -0.38
MMP1-201ENST00000315274 PNNQ9H307 717 aaKnown RBP12.65□□□□□ -0.38
MMP1-201ENST00000315274 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.39
MMP1-201ENST00000315274 RGPD1P0DJD0 1748 aa12.64□□□□□ -0.39
MMP1-201ENST00000315274 CRB1P82279 1406 aa12.64□□□□□ -0.39
MMP1-201ENST00000315274 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
MMP1-201ENST00000315274 FAM208AQ9UK61 1670 aaKnown RBP12.63□□□□□ -0.39
MMP1-201ENST00000315274 NEFMP07197 916 aa12.63□□□□□ -0.39
MMP1-201ENST00000315274 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
MMP1-201ENST00000315274 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
MMP1-201ENST00000315274 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
MMP1-201ENST00000315274 NRAPQ86VF7 1730 aa12.63□□□□□ -0.39
MMP1-201ENST00000315274 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
MMP1-201ENST00000315274 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
MMP1-201ENST00000315274 KDRP35968 1356 aa12.62□□□□□ -0.39
MMP1-201ENST00000315274 VPS72Q15906 364 aa12.61□□□□□ -0.39
MMP1-201ENST00000315274 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
MMP1-201ENST00000315274 QTRT2Q9H974 415 aaKnown RBP12.61□□□□□ -0.39
MMP1-201ENST00000315274 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
MMP1-201ENST00000315274 SPATA31A5Q5VU36 1347 aa12.61□□□□□ -0.39
MMP1-201ENST00000315274 SPATA31A7Q8IWB4 1347 aa12.61□□□□□ -0.39
MMP1-201ENST00000315274 TATP17735 454 aaPredicted RBP12.61□□□□□ -0.39
MMP1-201ENST00000315274 NEUROD2Q15784 382 aa12.61□□□□□ -0.39
MMP1-201ENST00000315274 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
MMP1-201ENST00000315274 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
MMP1-201ENST00000315274 APAF1O14727 1248 aa12.6□□□□□ -0.39
MMP1-201ENST00000315274 TRPC5Q9UL62 973 aaPredicted RBP12.6□□□□□ -0.39
MMP1-201ENST00000315274 IL2RBP14784 551 aa12.6□□□□□ -0.39
MMP1-201ENST00000315274 ZNF772Q68DY9 489 aaPredicted RBP12.6□□□□□ -0.39
MMP1-201ENST00000315274 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
MMP1-201ENST00000315274 HNRNPUQ00839 825 aaKnown RBP eCLIP12.59□□□□□ -0.39
MMP1-201ENST00000315274 GJD4Q96KN9 370 aaPredicted RBP12.59□□□□□ -0.39
MMP1-201ENST00000315274 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
MMP1-201ENST00000315274 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms