RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 FLT4P35916 1363 aa17.11■□□□□ 0.33
CHMP2A-201ENST00000312547 CDK12Q9NYV4 1490 aaPredicted RBP17.11■□□□□ 0.33
CHMP2A-201ENST00000312547 LMO7Q8WWI1 1683 aa17.1■□□□□ 0.33
CHMP2A-201ENST00000312547 PEAK1Q9H792 1746 aa17.1■□□□□ 0.33
CHMP2A-201ENST00000312547 COL18A1P39060 1754 aa17.1■□□□□ 0.33
CHMP2A-201ENST00000312547 AMPHP49418 695 aa17.1■□□□□ 0.33
CHMP2A-201ENST00000312547 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
CHMP2A-201ENST00000312547 SLIT2O94813 1529 aa17.1■□□□□ 0.33
CHMP2A-201ENST00000312547 ZBTB7CA1YPR0 619 aa17.09■□□□□ 0.33
CHMP2A-201ENST00000312547 FNBP4Q8N3X1 1017 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-201ENST00000312547 BLMP54132 1417 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-201ENST00000312547 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
CHMP2A-201ENST00000312547 CAMTA1Q9Y6Y1 1673 aa17.08■□□□□ 0.32
CHMP2A-201ENST00000312547 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
CHMP2A-201ENST00000312547 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
CHMP2A-201ENST00000312547 LTN1O94822 1766 aa17.07■□□□□ 0.32
CHMP2A-201ENST00000312547 COL3A1P02461 1466 aaPredicted RBP17.07■□□□□ 0.32
CHMP2A-201ENST00000312547 C8orf37Q96NL8 207 aa17.07■□□□□ 0.32
CHMP2A-201ENST00000312547 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
CHMP2A-201ENST00000312547 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
CHMP2A-201ENST00000312547 NGLY1Q96IV0 654 aa17.06■□□□□ 0.32
CHMP2A-201ENST00000312547 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
CHMP2A-201ENST00000312547 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
CHMP2A-201ENST00000312547 ERBB3P21860 1342 aa17.05■□□□□ 0.32
CHMP2A-201ENST00000312547 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
CHMP2A-201ENST00000312547 IL13P35225 146 aa17.03■□□□□ 0.32
CHMP2A-201ENST00000312547 EIF4A2Q14240 407 aaKnown RBP17.03■□□□□ 0.32
CHMP2A-201ENST00000312547 ANKRD24Q8TF21 1146 aa17.03■□□□□ 0.32
CHMP2A-201ENST00000312547 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
CHMP2A-201ENST00000312547 CCDC184Q52MB2 194 aa17.02■□□□□ 0.32
CHMP2A-201ENST00000312547 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.32
CHMP2A-201ENST00000312547 MIER1Q8N108 512 aa17.02■□□□□ 0.32
CHMP2A-201ENST00000312547 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
CHMP2A-201ENST00000312547 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
CHMP2A-201ENST00000312547 AFF2P51816 1311 aa17.01■□□□□ 0.31
CHMP2A-201ENST00000312547 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
CHMP2A-201ENST00000312547 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
CHMP2A-201ENST00000312547 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
CHMP2A-201ENST00000312547 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
CHMP2A-201ENST00000312547 USP21Q9UK80 565 aa17■□□□□ 0.31
CHMP2A-201ENST00000312547 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
CHMP2A-201ENST00000312547 EVA1CP58658 441 aa16.99■□□□□ 0.31
CHMP2A-201ENST00000312547 LARP1Q6PKG0 1096 aaKnown RBP16.99■□□□□ 0.31
CHMP2A-201ENST00000312547 STRN4Q9NRL3 753 aa16.99■□□□□ 0.31
CHMP2A-201ENST00000312547 VPS72Q15906 364 aa16.98■□□□□ 0.31
CHMP2A-201ENST00000312547 NBPF6Q5VWK0 638 aa16.98■□□□□ 0.31
CHMP2A-201ENST00000312547 NBPF4Q96M43 638 aa16.98■□□□□ 0.31
CHMP2A-201ENST00000312547 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
CHMP2A-201ENST00000312547 RGPD5Q99666 1765 aa16.97■□□□□ 0.31
CHMP2A-201ENST00000312547 CRB1P82279 1406 aa16.97■□□□□ 0.31
CHMP2A-201ENST00000312547 NCAPD2Q15021 1401 aa16.97■□□□□ 0.31
CHMP2A-201ENST00000312547 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.97■□□□□ 0.31
CHMP2A-201ENST00000312547 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
CHMP2A-201ENST00000312547 EYA1Q99502 592 aa16.97■□□□□ 0.31
CHMP2A-201ENST00000312547 ATRNO75882 1429 aa16.96■□□□□ 0.31
CHMP2A-201ENST00000312547 CARD10Q9BWT7 1032 aa16.96■□□□□ 0.31
CHMP2A-201ENST00000312547 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
CHMP2A-201ENST00000312547 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.3
CHMP2A-201ENST00000312547 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.3
CHMP2A-201ENST00000312547 ZNF772Q68DY9 489 aaPredicted RBP16.95■□□□□ 0.3
CHMP2A-201ENST00000312547 TOM1L2Q6ZVM7 507 aa16.95■□□□□ 0.3
CHMP2A-201ENST00000312547 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
CHMP2A-201ENST00000312547 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
CHMP2A-201ENST00000312547 RGPD1P0DJD0 1748 aa16.95■□□□□ 0.3
CHMP2A-201ENST00000312547 SPATA31A1Q5TZJ5 1347 aa16.95■□□□□ 0.3
CHMP2A-201ENST00000312547 KDRP35968 1356 aa16.94■□□□□ 0.3
CHMP2A-201ENST00000312547 TRPC5Q9UL62 973 aaPredicted RBP16.94■□□□□ 0.3
CHMP2A-201ENST00000312547 FAM208AQ9UK61 1670 aaKnown RBP16.94■□□□□ 0.3
CHMP2A-201ENST00000312547 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
CHMP2A-201ENST00000312547 QTRT2Q9H974 415 aaKnown RBP16.92■□□□□ 0.3
CHMP2A-201ENST00000312547 U2SURPO15042 1029 aaKnown RBP16.91■□□□□ 0.3
CHMP2A-201ENST00000312547 AEBP1Q8IUX7 1158 aa16.91■□□□□ 0.3
CHMP2A-201ENST00000312547 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
CHMP2A-201ENST00000312547 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
CHMP2A-201ENST00000312547 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHMP2A-201ENST00000312547 GJD4Q96KN9 370 aaPredicted RBP16.91■□□□□ 0.3
CHMP2A-201ENST00000312547 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
CHMP2A-201ENST00000312547 U2AF1L5P0DN76 240 aaPredicted RBP16.9■□□□□ 0.3
CHMP2A-201ENST00000312547 U2AF1Q01081 240 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHMP2A-201ENST00000312547 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
CHMP2A-201ENST00000312547 DISP2A7MBM2 1401 aa16.89■□□□□ 0.29
CHMP2A-201ENST00000312547 BARGINQ6ZT62 677 aa16.89■□□□□ 0.29
CHMP2A-201ENST00000312547 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
CHMP2A-201ENST00000312547 USP35Q9P2H5 1018 aa16.89■□□□□ 0.29
CHMP2A-201ENST00000312547 GLI3P10071 1580 aa16.89■□□□□ 0.29
CHMP2A-201ENST00000312547 RGPD2P0DJD1 1756 aa16.88■□□□□ 0.29
CHMP2A-201ENST00000312547 FCHSD2O94868 740 aa16.88■□□□□ 0.29
CHMP2A-201ENST00000312547 HMOX1P09601 288 aa16.88■□□□□ 0.29
CHMP2A-201ENST00000312547 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHMP2A-201ENST00000312547 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
CHMP2A-201ENST00000312547 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
CHMP2A-201ENST00000312547 PLEKHG2Q9H7P9 1386 aa16.88■□□□□ 0.29
CHMP2A-201ENST00000312547 ONECUT3O60422 494 aaPredicted RBP16.87■□□□□ 0.29
CHMP2A-201ENST00000312547 MEGF6O75095 1541 aa16.86■□□□□ 0.29
CHMP2A-201ENST00000312547 SRCAPQ6ZRS2 3230 aa16.86■□□□□ 0.29
CHMP2A-201ENST00000312547 IL2RBP14784 551 aa16.86■□□□□ 0.29
CHMP2A-201ENST00000312547 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
CHMP2A-201ENST00000312547 PLEKHF1Q96S99 279 aa16.85■□□□□ 0.29
CHMP2A-201ENST00000312547 CDCA7Q9BWT1 371 aaPredicted RBP16.85■□□□□ 0.29
CHMP2A-201ENST00000312547 OVOS2A0A0G2JMS6 1433 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms