RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 RBM6P78332 1123 aaKnown RBP13.29□□□□□ -0.28
CHRNA9-201ENST00000310169 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
CHRNA9-201ENST00000310169 ILDR2Q71H61 639 aa13.28□□□□□ -0.28
CHRNA9-201ENST00000310169 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
CHRNA9-201ENST00000310169 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
CHRNA9-201ENST00000310169 AATKQ6ZMQ8 1374 aa13.27□□□□□ -0.28
CHRNA9-201ENST00000310169 VPS72Q15906 364 aa13.27□□□□□ -0.28
CHRNA9-201ENST00000310169 FBLN1P23142 703 aa13.27□□□□□ -0.29
CHRNA9-201ENST00000310169 NFAT5O94916 1531 aa13.27□□□□□ -0.29
CHRNA9-201ENST00000310169 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.26□□□□□ -0.29
CHRNA9-201ENST00000310169 ATRNO75882 1429 aa13.26□□□□□ -0.29
CHRNA9-201ENST00000310169 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
CHRNA9-201ENST00000310169 AMPHP49418 695 aa13.26□□□□□ -0.29
CHRNA9-201ENST00000310169 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
CHRNA9-201ENST00000310169 AXIN2Q9Y2T1 843 aa13.26□□□□□ -0.29
CHRNA9-201ENST00000310169 LTN1O94822 1766 aa13.26□□□□□ -0.29
CHRNA9-201ENST00000310169 CAMTA1Q9Y6Y1 1673 aa13.25□□□□□ -0.29
CHRNA9-201ENST00000310169 CSB-PGBD3P0DP91 1061 aa13.25□□□□□ -0.29
CHRNA9-201ENST00000310169 USP35Q9P2H5 1018 aa13.25□□□□□ -0.29
CHRNA9-201ENST00000310169 RRS1Q15050 365 aaKnown RBP13.25□□□□□ -0.29
CHRNA9-201ENST00000310169 A0A0G2JS52 829 aa13.24□□□□□ -0.29
CHRNA9-201ENST00000310169 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
CHRNA9-201ENST00000310169 MORC1Q86VD1 984 aa13.24□□□□□ -0.29
CHRNA9-201ENST00000310169 MAP3K19Q56UN5 1328 aa13.24□□□□□ -0.29
CHRNA9-201ENST00000310169 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
CHRNA9-201ENST00000310169 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
CHRNA9-201ENST00000310169 NSD2O96028 1365 aa13.24□□□□□ -0.29
CHRNA9-201ENST00000310169 NRAPQ86VF7 1730 aa13.23□□□□□ -0.29
CHRNA9-201ENST00000310169 PER1O15534 1290 aaPredicted RBP13.23□□□□□ -0.29
CHRNA9-201ENST00000310169 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
CHRNA9-201ENST00000310169 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
CHRNA9-201ENST00000310169 LMO7Q8WWI1 1683 aa13.23□□□□□ -0.29
CHRNA9-201ENST00000310169 IP6K1Q92551 441 aa13.23□□□□□ -0.29
CHRNA9-201ENST00000310169 SPATA31A5Q5VU36 1347 aa13.22□□□□□ -0.29
CHRNA9-201ENST00000310169 SPATA31A7Q8IWB4 1347 aa13.22□□□□□ -0.29
CHRNA9-201ENST00000310169 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
CHRNA9-201ENST00000310169 COL5A2P05997 1499 aaPredicted RBP13.22□□□□□ -0.29
CHRNA9-201ENST00000310169 COL18A1P39060 1754 aa13.22□□□□□ -0.29
CHRNA9-201ENST00000310169 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
CHRNA9-201ENST00000310169 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
CHRNA9-201ENST00000310169 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
CHRNA9-201ENST00000310169 MAP2P11137 1827 aaKnown RBP13.21□□□□□ -0.29
CHRNA9-201ENST00000310169 ANKRD26Q9UPS8 1709 aa13.21□□□□□ -0.29
CHRNA9-201ENST00000310169 HOXC9P31274 260 aa13.21□□□□□ -0.29
CHRNA9-201ENST00000310169 SPATA31A1Q5TZJ5 1347 aa13.21□□□□□ -0.3
CHRNA9-201ENST00000310169 WDR17Q8IZU2 1322 aa13.21□□□□□ -0.3
CHRNA9-201ENST00000310169 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
CHRNA9-201ENST00000310169 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
CHRNA9-201ENST00000310169 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
CHRNA9-201ENST00000310169 EMILIN1Q9Y6C2 1016 aa13.2□□□□□ -0.3
CHRNA9-201ENST00000310169 GLI3P10071 1580 aa13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 BLMP54132 1417 aaPredicted RBP13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 CRB1P82279 1406 aa13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 ABCC6O95255 1503 aa13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 CDK12Q9NYV4 1490 aaPredicted RBP13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 ERBB3P21860 1342 aa13.19□□□□□ -0.3
CHRNA9-201ENST00000310169 EP400Q96L91 3159 aa13.18□□□□□ -0.3
CHRNA9-201ENST00000310169 NEFLP07196 543 aa13.18□□□□□ -0.3
CHRNA9-201ENST00000310169 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
CHRNA9-201ENST00000310169 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
CHRNA9-201ENST00000310169 FLT4P35916 1363 aa13.18□□□□□ -0.3
CHRNA9-201ENST00000310169 HSP90AB2PQ58FF8 381 aa13.18□□□□□ -0.3
CHRNA9-201ENST00000310169 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
CHRNA9-201ENST00000310169 RGS12O14924 1447 aa13.17□□□□□ -0.3
CHRNA9-201ENST00000310169 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
CHRNA9-201ENST00000310169 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
CHRNA9-201ENST00000310169 KIF24Q5T7B8 1368 aa13.17□□□□□ -0.3
CHRNA9-201ENST00000310169 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
CHRNA9-201ENST00000310169 BARGINQ6ZT62 677 aa13.16□□□□□ -0.3
CHRNA9-201ENST00000310169 NPC1L1Q9UHC9 1359 aa13.16□□□□□ -0.3
CHRNA9-201ENST00000310169 INSRP06213 1382 aa13.15□□□□□ -0.3
CHRNA9-201ENST00000310169 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
CHRNA9-201ENST00000310169 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
CHRNA9-201ENST00000310169 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
CHRNA9-201ENST00000310169 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
CHRNA9-201ENST00000310169 MTHFSP49914 203 aa13.13□□□□□ -0.31
CHRNA9-201ENST00000310169 CDCA7Q9BWT1 371 aaPredicted RBP13.13□□□□□ -0.31
CHRNA9-201ENST00000310169 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
CHRNA9-201ENST00000310169 SOCS7O14512 581 aa13.11□□□□□ -0.31
CHRNA9-201ENST00000310169 EIF5BO60841 1220 aaKnown RBP13.11□□□□□ -0.31
CHRNA9-201ENST00000310169 DDB1Q16531 1140 aa13.11□□□□□ -0.31
CHRNA9-201ENST00000310169 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
CHRNA9-201ENST00000310169 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
CHRNA9-201ENST00000310169 FAM208AQ9UK61 1670 aaKnown RBP13.11□□□□□ -0.31
CHRNA9-201ENST00000310169 IL2RBP14784 551 aa13.11□□□□□ -0.31
CHRNA9-201ENST00000310169 RGPD2P0DJD1 1756 aa13.11□□□□□ -0.31
CHRNA9-201ENST00000310169 EXOC5O00471 708 aa13.1□□□□□ -0.31
CHRNA9-201ENST00000310169 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
CHRNA9-201ENST00000310169 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
CHRNA9-201ENST00000310169 FAM182BQ5T319 152 aa13.09□□□□□ -0.31
CHRNA9-201ENST00000310169 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
CHRNA9-201ENST00000310169 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.31
CHRNA9-201ENST00000310169 EYA1Q99502 592 aa13.08□□□□□ -0.32
CHRNA9-201ENST00000310169 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
CHRNA9-201ENST00000310169 FKBP8Q14318 412 aa13.07□□□□□ -0.32
CHRNA9-201ENST00000310169 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
CHRNA9-201ENST00000310169 RBM19Q9Y4C8 960 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms