RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 RBM6P78332 1123 aaKnown RBP15.08■□□□□ 0
CSPG4P1Y-201ENST00000306641 STRN4Q9NRL3 753 aa15.08■□□□□ 0
CSPG4P1Y-201ENST00000306641 COL5A2P05997 1499 aaPredicted RBP15.08■□□□□ 0
CSPG4P1Y-201ENST00000306641 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
CSPG4P1Y-201ENST00000306641 VPS72Q15906 364 aa15.07■□□□□ 0
CSPG4P1Y-201ENST00000306641 ARHGEF25Q86VW2 580 aa15.07■□□□□ 0
CSPG4P1Y-201ENST00000306641 WNK3Q9BYP7 1800 aa15.07■□□□□ 0
CSPG4P1Y-201ENST00000306641 GJD4Q96KN9 370 aaPredicted RBP15.05■□□□□ -0
CSPG4P1Y-201ENST00000306641 BLMP54132 1417 aaPredicted RBP15.04■□□□□ -0
CSPG4P1Y-201ENST00000306641 RTL1A6NKG5 1358 aa15.04■□□□□ -0
CSPG4P1Y-201ENST00000306641 ILDR2Q71H61 639 aa15.04■□□□□ -0
CSPG4P1Y-201ENST00000306641 BRWD3Q6RI45 1802 aa15.03■□□□□ -0
CSPG4P1Y-201ENST00000306641 RGS12O14924 1447 aa15.03■□□□□ -0
CSPG4P1Y-201ENST00000306641 CSB-PGBD3P0DP91 1061 aa15.03■□□□□ -0
CSPG4P1Y-201ENST00000306641 AMPHP49418 695 aa15.03■□□□□ -0
CSPG4P1Y-201ENST00000306641 CRB1P82279 1406 aa15.02■□□□□ -0
CSPG4P1Y-201ENST00000306641 MAP3K19Q56UN5 1328 aa15.02■□□□□ -0
CSPG4P1Y-201ENST00000306641 A0A0G2JS52 829 aa15.02■□□□□ -0
CSPG4P1Y-201ENST00000306641 MYT1Q01538 1121 aa15.02■□□□□ -0
CSPG4P1Y-201ENST00000306641 PEAK1Q9H792 1746 aa15.02□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 SMG6Q86US8 1419 aaKnown RBP15.01□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 RGPD2P0DJD1 1756 aa15.01□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 SPATA31A5Q5VU36 1347 aa15.01□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 SPATA31A7Q8IWB4 1347 aa15.01□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 RRS1Q15050 365 aaKnown RBP15.01□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 THSD7AQ9UPZ6 1657 aa15□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 WDR17Q8IZU2 1322 aa15□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 LARP1Q6PKG0 1096 aaKnown RBP15□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 TOM1L2Q6ZVM7 507 aa15□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 USP35Q9P2H5 1018 aa15□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 FLT4P35916 1363 aa14.99□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 KIF24Q5T7B8 1368 aa14.99□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 SPATA31A1Q5TZJ5 1347 aa14.99□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 TNNT2P45379 298 aaPredicted RBP14.99□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 IP6K1Q92551 441 aa14.99□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 AXIN2Q9Y2T1 843 aa14.99□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 PARP4Q9UKK3 1724 aaKnown RBP14.99□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 ERBB3P21860 1342 aa14.98□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 FBLN1P23142 703 aa14.98□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 HOXC9P31274 260 aa14.98□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 FAM98CQ17RN3 349 aaKnown RBP14.98□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 CC2D1BQ5T0F9 858 aaKnown RBP14.97□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 TCP11L2Q8N4U5 519 aa14.97□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 ANKRD24Q8TF21 1146 aa14.97□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 THRAP3Q9Y2W1 955 aaKnown RBP14.97□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 CNGB1Q14028 1251 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 LTV1Q96GA3 475 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 EMILIN1Q9Y6C2 1016 aa14.96□□□□□ -0.01
CSPG4P1Y-201ENST00000306641 LRRC37A3O60309 1634 aa14.95□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 SEPT12Q8IYM1 358 aa14.95□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 NLRP2Q9NX02 1062 aa14.95□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 INSRP06213 1382 aa14.95□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 BARGINQ6ZT62 677 aa14.94□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 CARD10Q9BWT7 1032 aa14.94□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 POLKQ9UBT6 870 aa14.93□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 ONECUT3O60422 494 aaPredicted RBP14.92□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 DDX10Q13206 875 aaKnown RBP14.91□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 KRT27Q7Z3Y8 459 aa14.9□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 CDCA7Q9BWT1 371 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P1Y-201ENST00000306641 SOCS7O14512 581 aa14.89□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 PDE3BQ13370 1112 aa14.88□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 DISP2A7MBM2 1401 aa14.88□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 RGPD1P0DJD0 1748 aa14.88□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 TNS2Q63HR2 1409 aa14.87□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 IL2RBP14784 551 aa14.87□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 DDB1Q16531 1140 aa14.87□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 SHANK3Q9BYB0 1731 aa14.86□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 SBF2Q86WG5 1849 aa14.85□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 MTHFSP49914 203 aa14.85□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 USHBP1Q8N6Y0 703 aa14.85□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 OVOS2A0A0G2JMS6 1433 aa14.84□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 PKD1L3Q7Z443 1732 aa14.84□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 EIF4A2Q14240 407 aaKnown RBP14.84□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 NBPF6Q5VWK0 638 aa14.84□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 RAPGEF4Q8WZA2 1011 aa14.84□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 NBPF4Q96M43 638 aa14.84□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 PARD3Q8TEW0 1356 aa14.84□□□□□ -0.03
CSPG4P1Y-201ENST00000306641 MEGF6O75095 1541 aa14.83□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 EXOC5O00471 708 aa14.83□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 CFAP53Q96M91 514 aa14.83□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 NCAPD2Q15021 1401 aa14.83□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 TATP17735 454 aaPredicted RBP14.82□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 TNS1Q9HBL0 1735 aaKnown RBP14.82□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 EYA1Q99502 592 aa14.81□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 PPP2R1AP30153 589 aa14.8□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 RALBP1Q15311 655 aa14.8□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 FAM196AQ6ZSG2 479 aa14.8□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 IGSF1Q8N6C5 1336 aa14.8□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 DOT1LQ8TEK3 1739 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms