RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZRANB1Q9UGI0 708 aa36.98■■■■□ 3.51
CDKN2A-201ENST00000304494 CRB1P82279 1406 aa36.97■■■■□ 3.51
CDKN2A-201ENST00000304494 COL18A1P39060 1754 aa36.96■■■■□ 3.51
CDKN2A-201ENST00000304494 ANKRD36BQ8N2N9 1353 aa36.95■■■■□ 3.51
CDKN2A-201ENST00000304494 SF3B2Q13435 895 aaKnown RBP36.95■■■■□ 3.51
CDKN2A-201ENST00000304494 AXIN2Q9Y2T1 843 aa36.93■■■■□ 3.5
CDKN2A-201ENST00000304494 ABCC6O95255 1503 aa36.93■■■■□ 3.5
CDKN2A-201ENST00000304494 WDR17Q8IZU2 1322 aa36.9■■■■□ 3.5
CDKN2A-201ENST00000304494 TOM1L2Q6ZVM7 507 aa36.9■■■■□ 3.5
CDKN2A-201ENST00000304494 OVOS2A0A0J9YW53 1432 aa36.89■■■■□ 3.5
CDKN2A-201ENST00000304494 OVOS2Q6IE36 1432 aa36.89■■■■□ 3.5
CDKN2A-201ENST00000304494 PDE3BQ13370 1112 aa36.85■■■■□ 3.49
CDKN2A-201ENST00000304494 FAM182BQ5T319 152 aa36.85■■■■□ 3.49
CDKN2A-201ENST00000304494 CSB-PGBD3P0DP91 1061 aa36.83■■■■□ 3.49
CDKN2A-201ENST00000304494 COG3Q96JB2 828 aa36.83■■■■□ 3.49
CDKN2A-201ENST00000304494 RGPD5Q99666 1765 aa36.81■■■■□ 3.48
CDKN2A-201ENST00000304494 EIF4G2P78344 907 aaKnown RBP eCLIP36.81■■■■□ 3.48
CDKN2A-201ENST00000304494 FAM196AQ6ZSG2 479 aa36.81■■■■□ 3.48
CDKN2A-201ENST00000304494 PARP4Q9UKK3 1724 aaKnown RBP36.8■■■■□ 3.48
CDKN2A-201ENST00000304494 LTN1O94822 1766 aa36.79■■■■□ 3.48
CDKN2A-201ENST00000304494 CARD10Q9BWT7 1032 aa36.79■■■■□ 3.48
CDKN2A-201ENST00000304494 DEFB132Q7Z7B7 95 aa36.78■■■■□ 3.48
CDKN2A-201ENST00000304494 RGPD1P0DJD0 1748 aa36.77■■■■□ 3.48
CDKN2A-201ENST00000304494 CDCA7Q9BWT1 371 aaPredicted RBP36.77■■■■□ 3.48
CDKN2A-201ENST00000304494 BAG6P46379 1132 aa36.76■■■■□ 3.48
CDKN2A-201ENST00000304494 MYOM1P52179 1685 aa36.74■■■■□ 3.47
CDKN2A-201ENST00000304494 ERBB3P21860 1342 aa36.73■■■■□ 3.47
CDKN2A-201ENST00000304494 CCDC7Q96M83 1385 aa36.73■■■■□ 3.47
CDKN2A-201ENST00000304494 HSPA5P11021 654 aaKnown RBP36.72■■■■□ 3.47
CDKN2A-201ENST00000304494 C11orf95C9JLR9 678 aaPredicted RBP36.71■■■■□ 3.47
CDKN2A-201ENST00000304494 FYB1O15117 783 aa36.71■■■■□ 3.47
CDKN2A-201ENST00000304494 DDB1Q16531 1140 aa36.71■■■■□ 3.47
CDKN2A-201ENST00000304494 WNK3Q9BYP7 1800 aa36.71■■■■□ 3.47
CDKN2A-201ENST00000304494 LRRC37A3O60309 1634 aa36.7■■■■□ 3.47
CDKN2A-201ENST00000304494 ANKRD24Q8TF21 1146 aa36.68■■■■□ 3.46
CDKN2A-201ENST00000304494 IP6K1Q92551 441 aa36.68■■■■□ 3.46
CDKN2A-201ENST00000304494 GGNBP2Q9H3C7 697 aa36.68■■■■□ 3.46
CDKN2A-201ENST00000304494 TRIM37O94972 964 aa36.67■■■■□ 3.46
CDKN2A-201ENST00000304494 TNS1Q9HBL0 1735 aaKnown RBP36.66■■■■□ 3.46
CDKN2A-201ENST00000304494 DISP2A7MBM2 1401 aa36.66■■■■□ 3.46
CDKN2A-201ENST00000304494 CARD14Q9BXL6 1004 aa36.65■■■■□ 3.46
CDKN2A-201ENST00000304494 NLRP2Q9NX02 1062 aa36.65■■■■□ 3.46
CDKN2A-201ENST00000304494 MAP3K19Q56UN5 1328 aa36.64■■■■□ 3.46
CDKN2A-201ENST00000304494 POLR3GLQ9BT43 218 aa36.64■■■■□ 3.46
CDKN2A-201ENST00000304494 OVOS2A0A0G2JMS6 1433 aa36.64■■■■□ 3.46
CDKN2A-201ENST00000304494 NSD3Q9BZ95 1437 aa36.64■■■■□ 3.46
CDKN2A-201ENST00000304494 KIF20BQ96Q89 1820 aa36.64■■■■□ 3.46
CDKN2A-201ENST00000304494 AMPHP49418 695 aa36.61■■■■□ 3.45
CDKN2A-201ENST00000304494 EN1Q05925 392 aaPredicted RBP36.6■■■■□ 3.45
CDKN2A-201ENST00000304494 RTL1A6NKG5 1358 aa36.59■■■■□ 3.45
CDKN2A-201ENST00000304494 EXOC5O00471 708 aa36.59■■■■□ 3.45
CDKN2A-201ENST00000304494 HOXC9P31274 260 aa36.59■■■■□ 3.45
CDKN2A-201ENST00000304494 PEAK1Q9H792 1746 aa36.57■■■■□ 3.45
CDKN2A-201ENST00000304494 APBA3O96018 575 aa36.57■■■■□ 3.44
CDKN2A-201ENST00000304494 FBLN1P23142 703 aa36.57■■■■□ 3.44
CDKN2A-201ENST00000304494 FAM208AQ9UK61 1670 aaKnown RBP36.56■■■■□ 3.44
CDKN2A-201ENST00000304494 TNS2Q63HR2 1409 aa36.54■■■■□ 3.44
CDKN2A-201ENST00000304494 IL2RBP14784 551 aa36.54■■■■□ 3.44
CDKN2A-201ENST00000304494 RRS1Q15050 365 aaKnown RBP36.54■■■■□ 3.44
CDKN2A-201ENST00000304494 LTV1Q96GA3 475 aaPredicted RBP36.54■■■■□ 3.44
CDKN2A-201ENST00000304494 CGNL1Q0VF96 1302 aa36.54■■■■□ 3.44
CDKN2A-201ENST00000304494 MARCH10Q8NA82 808 aaPredicted RBP36.53■■■■□ 3.44
CDKN2A-201ENST00000304494 PARD3Q8TEW0 1356 aa36.53■■■■□ 3.44
CDKN2A-201ENST00000304494 BCL9O00512 1426 aa36.52■■■■□ 3.44
CDKN2A-201ENST00000304494 EZH2Q15910 746 aaKnown RBP36.5■■■■□ 3.43
CDKN2A-201ENST00000304494 CAMKK2Q96RR4 588 aa36.5■■■■□ 3.43
CDKN2A-201ENST00000304494 KIF24Q5T7B8 1368 aa36.49■■■■□ 3.43
CDKN2A-201ENST00000304494 SMG6Q86US8 1419 aaKnown RBP36.46■■■■□ 3.43
CDKN2A-201ENST00000304494 FLT4P35916 1363 aa36.44■■■■□ 3.42
CDKN2A-201ENST00000304494 BCL11BQ9C0K0 894 aaPredicted RBP36.44■■■■□ 3.42
CDKN2A-201ENST00000304494 SBF2Q86WG5 1849 aa36.43■■■■□ 3.42
CDKN2A-201ENST00000304494 INSRP06213 1382 aa36.42■■■■□ 3.42
CDKN2A-201ENST00000304494 PANK3Q9H999 370 aa36.42■■■■□ 3.42
CDKN2A-201ENST00000304494 HSP90AB2PQ58FF8 381 aa36.37■■■■□ 3.41
CDKN2A-201ENST00000304494 RREB1Q92766 1687 aa36.36■■■■□ 3.41
CDKN2A-201ENST00000304494 PLSCR1O15162 318 aa36.36■■■■□ 3.41
CDKN2A-201ENST00000304494 EMILIN1Q9Y6C2 1016 aa36.35■■■■□ 3.41
CDKN2A-201ENST00000304494 NBPF6Q5VWK0 638 aa36.34■■■■□ 3.41
CDKN2A-201ENST00000304494 NBPF4Q96M43 638 aa36.34■■■■□ 3.41
CDKN2A-201ENST00000304494 RGPD3A6NKT7 1758 aaPredicted RBP36.34■■■■□ 3.41
CDKN2A-201ENST00000304494 RGPD4Q7Z3J3 1758 aa36.34■■■■□ 3.41
CDKN2A-201ENST00000304494 SRCAPQ6ZRS2 3230 aa36.34■■■■□ 3.41
CDKN2A-201ENST00000304494 ANKRD26Q9UPS8 1709 aa36.34■■■■□ 3.41
CDKN2A-201ENST00000304494 PSDA5PKW4 1024 aaPredicted RBP36.33■■■■□ 3.41
CDKN2A-201ENST00000304494 RGPD2P0DJD1 1756 aa36.32■■■■□ 3.41
CDKN2A-201ENST00000304494 NSD2O96028 1365 aa36.32■■■■□ 3.4
CDKN2A-201ENST00000304494 PPM1GO15355 546 aaPredicted RBP36.31■■■■□ 3.4
CDKN2A-201ENST00000304494 PTF1AQ7RTS3 328 aa36.31■■■■□ 3.4
CDKN2A-201ENST00000304494 KIF7Q2M1P5 1343 aa36.31■■■■□ 3.4
CDKN2A-201ENST00000304494 NUP188Q5SRE5 1749 aa36.29■■■■□ 3.4
CDKN2A-201ENST00000304494 R3HDM1Q15032 1099 aaKnown RBP36.29■■■■□ 3.4
CDKN2A-201ENST00000304494 NBPF14Q5TI25 921 aa36.29■■■■□ 3.4
CDKN2A-201ENST00000304494 DDX54Q8TDD1 881 aaKnown RBP36.28■■■■□ 3.4
CDKN2A-201ENST00000304494 NHSQ6T4R5 1651 aa36.28■■■■□ 3.4
CDKN2A-201ENST00000304494 WASHC2AQ641Q2 1341 aa36.28■■■■□ 3.4
CDKN2A-201ENST00000304494 USHBP1Q8N6Y0 703 aa36.27■■■■□ 3.4
CDKN2A-201ENST00000304494 RAPGEF4Q8WZA2 1011 aa36.27■■■■□ 3.4
CDKN2A-201ENST00000304494 MEGF6O75095 1541 aa36.27■■■■□ 3.4
CDKN2A-201ENST00000304494 ZCRB1Q8TBF4 217 aaKnown RBP36.26■■■■□ 3.4
CDKN2A-201ENST00000304494 POLKQ9UBT6 870 aa36.26■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms