RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 FYB1O15117 783 aa23.33■■□□□ 1.33
NDUFA3-201ENST00000303553 CRB1P82279 1406 aa23.33■■□□□ 1.32
NDUFA3-201ENST00000303553 BRWD3Q6RI45 1802 aa23.32■■□□□ 1.32
NDUFA3-201ENST00000303553 A0A0G2JS52 829 aa23.32■■□□□ 1.32
NDUFA3-201ENST00000303553 MYT1Q01538 1121 aa23.32■■□□□ 1.32
NDUFA3-201ENST00000303553 CARD14Q9BXL6 1004 aa23.32■■□□□ 1.32
NDUFA3-201ENST00000303553 THSD7AQ9UPZ6 1657 aa23.32■■□□□ 1.32
NDUFA3-201ENST00000303553 FAM98CQ17RN3 349 aaKnown RBP23.31■■□□□ 1.32
NDUFA3-201ENST00000303553 SEPT12Q8IYM1 358 aa23.31■■□□□ 1.32
NDUFA3-201ENST00000303553 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
NDUFA3-201ENST00000303553 ANKRD26Q9UPS8 1709 aa23.3■■□□□ 1.32
NDUFA3-201ENST00000303553 LARP1Q6PKG0 1096 aaKnown RBP23.3■■□□□ 1.32
NDUFA3-201ENST00000303553 GGNBP2Q9H3C7 697 aa23.3■■□□□ 1.32
NDUFA3-201ENST00000303553 THRAP3Q9Y2W1 955 aaKnown RBP23.3■■□□□ 1.32
NDUFA3-201ENST00000303553 WDR17Q8IZU2 1322 aa23.3■■□□□ 1.32
NDUFA3-201ENST00000303553 C11orf95C9JLR9 678 aaPredicted RBP23.29■■□□□ 1.32
NDUFA3-201ENST00000303553 BLMP54132 1417 aaPredicted RBP23.29■■□□□ 1.32
NDUFA3-201ENST00000303553 BARGINQ6ZT62 677 aa23.28■■□□□ 1.32
NDUFA3-201ENST00000303553 TCP11L2Q8N4U5 519 aa23.28■■□□□ 1.32
NDUFA3-201ENST00000303553 USP35Q9P2H5 1018 aa23.28■■□□□ 1.32
NDUFA3-201ENST00000303553 AXIN2Q9Y2T1 843 aa23.28■■□□□ 1.32
NDUFA3-201ENST00000303553 CSB-PGBD3P0DP91 1061 aa23.27■■□□□ 1.32
NDUFA3-201ENST00000303553 TOM1L2Q6ZVM7 507 aa23.27■■□□□ 1.32
NDUFA3-201ENST00000303553 PANK3Q9H999 370 aa23.27■■□□□ 1.32
NDUFA3-201ENST00000303553 FAM208AQ9UK61 1670 aaKnown RBP23.27■■□□□ 1.32
NDUFA3-201ENST00000303553 RTL1A6NKG5 1358 aa23.27■■□□□ 1.31
NDUFA3-201ENST00000303553 WNK3Q9BYP7 1800 aa23.26■■□□□ 1.31
NDUFA3-201ENST00000303553 NSD2O96028 1365 aa23.25■■□□□ 1.31
NDUFA3-201ENST00000303553 KRT27Q7Z3Y8 459 aa23.24■■□□□ 1.31
NDUFA3-201ENST00000303553 ERBB3P21860 1342 aa23.24■■□□□ 1.31
NDUFA3-201ENST00000303553 PARP4Q9UKK3 1724 aaKnown RBP23.24■■□□□ 1.31
NDUFA3-201ENST00000303553 AMPHP49418 695 aa23.23■■□□□ 1.31
NDUFA3-201ENST00000303553 IP6K1Q92551 441 aa23.23■■□□□ 1.31
NDUFA3-201ENST00000303553 MAP3K19Q56UN5 1328 aa23.23■■□□□ 1.31
NDUFA3-201ENST00000303553 KIF24Q5T7B8 1368 aa23.23■■□□□ 1.31
NDUFA3-201ENST00000303553 CCDC7Q96M83 1385 aa23.23■■□□□ 1.31
NDUFA3-201ENST00000303553 UPF1Q92900 1129 aaKnown RBP eCLIP23.22■■□□□ 1.31
NDUFA3-201ENST00000303553 CARD10Q9BWT7 1032 aa23.21■■□□□ 1.31
NDUFA3-201ENST00000303553 KNSTRNQ9Y448 316 aa23.21■■□□□ 1.31
NDUFA3-201ENST00000303553 CDCA7Q9BWT1 371 aaPredicted RBP23.2■■□□□ 1.3
NDUFA3-201ENST00000303553 HOXC9P31274 260 aa23.19■■□□□ 1.3
NDUFA3-201ENST00000303553 ANKRD24Q8TF21 1146 aa23.19■■□□□ 1.3
NDUFA3-201ENST00000303553 SMG6Q86US8 1419 aaKnown RBP23.18■■□□□ 1.3
NDUFA3-201ENST00000303553 FLT4P35916 1363 aa23.17■■□□□ 1.3
NDUFA3-201ENST00000303553 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
NDUFA3-201ENST00000303553 RRS1Q15050 365 aaKnown RBP23.17■■□□□ 1.3
NDUFA3-201ENST00000303553 LRRC37A3O60309 1634 aa23.17■■□□□ 1.3
NDUFA3-201ENST00000303553 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
NDUFA3-201ENST00000303553 CCDC125Q86Z20 511 aa23.16■■□□□ 1.3
NDUFA3-201ENST00000303553 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
NDUFA3-201ENST00000303553 MAP2P11137 1827 aaKnown RBP23.16■■□□□ 1.3
NDUFA3-201ENST00000303553 EP400Q96L91 3159 aa23.15■■□□□ 1.3
NDUFA3-201ENST00000303553 PDE3BQ13370 1112 aa23.15■■□□□ 1.3
NDUFA3-201ENST00000303553 PEAK1Q9H792 1746 aa23.14■■□□□ 1.3
NDUFA3-201ENST00000303553 FBLN1P23142 703 aa23.14■■□□□ 1.29
NDUFA3-201ENST00000303553 INSRP06213 1382 aa23.13■■□□□ 1.29
NDUFA3-201ENST00000303553 DISP2A7MBM2 1401 aa23.12■■□□□ 1.29
NDUFA3-201ENST00000303553 RGPD1P0DJD0 1748 aa23.11■■□□□ 1.29
NDUFA3-201ENST00000303553 DDB1Q16531 1140 aa23.11■■□□□ 1.29
NDUFA3-201ENST00000303553 LTV1Q96GA3 475 aaPredicted RBP23.11■■□□□ 1.29
NDUFA3-201ENST00000303553 SF3B2Q13435 895 aaKnown RBP23.09■■□□□ 1.29
NDUFA3-201ENST00000303553 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
NDUFA3-201ENST00000303553 MORC1Q86VD1 984 aa23.09■■□□□ 1.29
NDUFA3-201ENST00000303553 PPM1GO15355 546 aaPredicted RBP23.08■■□□□ 1.29
NDUFA3-201ENST00000303553 EMILIN1Q9Y6C2 1016 aa23.08■■□□□ 1.29
NDUFA3-201ENST00000303553 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
NDUFA3-201ENST00000303553 TNS2Q63HR2 1409 aa23.08■■□□□ 1.28
NDUFA3-201ENST00000303553 IL2RBP14784 551 aa23.07■■□□□ 1.28
NDUFA3-201ENST00000303553 AMER1Q5JTC6 1135 aaPredicted RBP23.07■■□□□ 1.28
NDUFA3-201ENST00000303553 OVOS2A0A0G2JMS6 1433 aa23.07■■□□□ 1.28
NDUFA3-201ENST00000303553 NPC1L1Q9UHC9 1359 aa23.06■■□□□ 1.28
NDUFA3-201ENST00000303553 TNNT2P45379 298 aaPredicted RBP23.06■■□□□ 1.28
NDUFA3-201ENST00000303553 HSP90AB2PQ58FF8 381 aa23.06■■□□□ 1.28
NDUFA3-201ENST00000303553 EXOC5O00471 708 aa23.05■■□□□ 1.28
NDUFA3-201ENST00000303553 PER1O15534 1290 aaPredicted RBP23.05■■□□□ 1.28
NDUFA3-201ENST00000303553 POLKQ9UBT6 870 aa23.05■■□□□ 1.28
NDUFA3-201ENST00000303553 FAM182BQ5T319 152 aa23.03■■□□□ 1.28
NDUFA3-201ENST00000303553 TNS1Q9HBL0 1735 aaKnown RBP23.02■■□□□ 1.28
NDUFA3-201ENST00000303553 BCL9O00512 1426 aa22.99■■□□□ 1.27
NDUFA3-201ENST00000303553 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
NDUFA3-201ENST00000303553 NBPF6Q5VWK0 638 aa22.99■■□□□ 1.27
NDUFA3-201ENST00000303553 NBPF4Q96M43 638 aa22.99■■□□□ 1.27
NDUFA3-201ENST00000303553 BAG6P46379 1132 aa22.98■■□□□ 1.27
NDUFA3-201ENST00000303553 RAPGEF4Q8WZA2 1011 aa22.98■■□□□ 1.27
NDUFA3-201ENST00000303553 SBF2Q86WG5 1849 aa22.98■■□□□ 1.27
NDUFA3-201ENST00000303553 MEGF6O75095 1541 aa22.95■■□□□ 1.26
NDUFA3-201ENST00000303553 TRIM37O94972 964 aa22.95■■□□□ 1.26
NDUFA3-201ENST00000303553 NCAPD2Q15021 1401 aa22.95■■□□□ 1.26
NDUFA3-201ENST00000303553 MARCH10Q8NA82 808 aaPredicted RBP22.95■■□□□ 1.26
NDUFA3-201ENST00000303553 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
NDUFA3-201ENST00000303553 TATP17735 454 aaPredicted RBP22.93■■□□□ 1.26
NDUFA3-201ENST00000303553 SHANK3Q9BYB0 1731 aa22.93■■□□□ 1.26
NDUFA3-201ENST00000303553 EIF4A2Q14240 407 aaKnown RBP22.92■■□□□ 1.26
NDUFA3-201ENST00000303553 PLEKHG2Q9H7P9 1386 aa22.91■■□□□ 1.26
NDUFA3-201ENST00000303553 NHSQ6T4R5 1651 aa22.91■■□□□ 1.26
NDUFA3-201ENST00000303553 ZCRB1Q8TBF4 217 aaKnown RBP22.91■■□□□ 1.26
NDUFA3-201ENST00000303553 RGPD3A6NKT7 1758 aaPredicted RBP22.91■■□□□ 1.26
NDUFA3-201ENST00000303553 RGPD4Q7Z3J3 1758 aa22.91■■□□□ 1.26
NDUFA3-201ENST00000303553 PKD1L3Q7Z443 1732 aa22.91■■□□□ 1.26
NDUFA3-201ENST00000303553 PARD3Q8TEW0 1356 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms