RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
HMGB2-201ENST00000296503 CSB-PGBD3P0DP91 1061 aa16.63■□□□□ 0.25
HMGB2-201ENST00000296503 MYOM1P52179 1685 aa16.63■□□□□ 0.25
HMGB2-201ENST00000296503 OVOS2A0A0J9YW53 1432 aa16.63■□□□□ 0.25
HMGB2-201ENST00000296503 OVOS2Q6IE36 1432 aa16.63■□□□□ 0.25
HMGB2-201ENST00000296503 FBLN1P23142 703 aa16.63■□□□□ 0.25
HMGB2-201ENST00000296503 TOM1L2Q6ZVM7 507 aa16.63■□□□□ 0.25
HMGB2-201ENST00000296503 KIF7Q2M1P5 1343 aa16.62■□□□□ 0.25
HMGB2-201ENST00000296503 CGNL1Q0VF96 1302 aa16.61■□□□□ 0.25
HMGB2-201ENST00000296503 NFAT5O94916 1531 aa16.61■□□□□ 0.25
HMGB2-201ENST00000296503 LMO7Q8WWI1 1683 aa16.61■□□□□ 0.25
HMGB2-201ENST00000296503 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
HMGB2-201ENST00000296503 AMPHP49418 695 aa16.6■□□□□ 0.25
HMGB2-201ENST00000296503 TCP11L2Q8N4U5 519 aa16.6■□□□□ 0.25
HMGB2-201ENST00000296503 USP54Q70EL1 1684 aa16.59■□□□□ 0.25
HMGB2-201ENST00000296503 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
HMGB2-201ENST00000296503 UPF1Q92900 1129 aaKnown RBP eCLIP16.59■□□□□ 0.25
HMGB2-201ENST00000296503 COL18A1P39060 1754 aa16.58■□□□□ 0.25
HMGB2-201ENST00000296503 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
HMGB2-201ENST00000296503 CRB1P82279 1406 aa16.58■□□□□ 0.24
HMGB2-201ENST00000296503 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
HMGB2-201ENST00000296503 IP6K1Q92551 441 aa16.58■□□□□ 0.24
HMGB2-201ENST00000296503 THRAP3Q9Y2W1 955 aaKnown RBP16.58■□□□□ 0.24
HMGB2-201ENST00000296503 KNSTRNQ9Y448 316 aa16.58■□□□□ 0.24
HMGB2-201ENST00000296503 BARGINQ6ZT62 677 aa16.57■□□□□ 0.24
HMGB2-201ENST00000296503 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
HMGB2-201ENST00000296503 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
HMGB2-201ENST00000296503 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
HMGB2-201ENST00000296503 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
HMGB2-201ENST00000296503 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
HMGB2-201ENST00000296503 LTN1O94822 1766 aa16.55■□□□□ 0.24
HMGB2-201ENST00000296503 KIF20BQ96Q89 1820 aa16.55■□□□□ 0.24
HMGB2-201ENST00000296503 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
HMGB2-201ENST00000296503 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
HMGB2-201ENST00000296503 CCDC7Q96M83 1385 aa16.55■□□□□ 0.24
HMGB2-201ENST00000296503 HOXC9P31274 260 aa16.54■□□□□ 0.24
HMGB2-201ENST00000296503 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
HMGB2-201ENST00000296503 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
HMGB2-201ENST00000296503 BRWD3Q6RI45 1802 aa16.54■□□□□ 0.24
HMGB2-201ENST00000296503 PPM1GO15355 546 aaPredicted RBP16.53■□□□□ 0.24
HMGB2-201ENST00000296503 ERBB3P21860 1342 aa16.53■□□□□ 0.24
HMGB2-201ENST00000296503 FAM182BQ5T319 152 aa16.52■□□□□ 0.24
HMGB2-201ENST00000296503 ABCC6O95255 1503 aa16.52■□□□□ 0.23
HMGB2-201ENST00000296503 BLMP54132 1417 aaPredicted RBP16.51■□□□□ 0.23
HMGB2-201ENST00000296503 MORC1Q86VD1 984 aa16.51■□□□□ 0.23
HMGB2-201ENST00000296503 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
HMGB2-201ENST00000296503 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
HMGB2-201ENST00000296503 CENPBP07199 599 aaPredicted RBP16.5■□□□□ 0.23
HMGB2-201ENST00000296503 DDB1Q16531 1140 aa16.5■□□□□ 0.23
HMGB2-201ENST00000296503 HSP90AB2PQ58FF8 381 aa16.49■□□□□ 0.23
HMGB2-201ENST00000296503 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
HMGB2-201ENST00000296503 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
HMGB2-201ENST00000296503 NSD2O96028 1365 aa16.48■□□□□ 0.23
HMGB2-201ENST00000296503 THSD7AQ9UPZ6 1657 aa16.48■□□□□ 0.23
HMGB2-201ENST00000296503 EXOC5O00471 708 aa16.48■□□□□ 0.23
HMGB2-201ENST00000296503 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
HMGB2-201ENST00000296503 SF3B2Q13435 895 aaKnown RBP16.48■□□□□ 0.23
HMGB2-201ENST00000296503 CNGB1Q14028 1251 aaPredicted RBP16.48■□□□□ 0.23
HMGB2-201ENST00000296503 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
HMGB2-201ENST00000296503 FLT4P35916 1363 aa16.47■□□□□ 0.23
HMGB2-201ENST00000296503 AMER1Q5JTC6 1135 aaPredicted RBP16.46■□□□□ 0.23
HMGB2-201ENST00000296503 FAM196AQ6ZSG2 479 aa16.46■□□□□ 0.23
HMGB2-201ENST00000296503 KIF24Q5T7B8 1368 aa16.46■□□□□ 0.23
HMGB2-201ENST00000296503 IL2RBP14784 551 aa16.46■□□□□ 0.22
HMGB2-201ENST00000296503 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.22
HMGB2-201ENST00000296503 INSRP06213 1382 aa16.45■□□□□ 0.22
HMGB2-201ENST00000296503 MAP2P11137 1827 aaKnown RBP16.45■□□□□ 0.22
HMGB2-201ENST00000296503 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
HMGB2-201ENST00000296503 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
HMGB2-201ENST00000296503 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
HMGB2-201ENST00000296503 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
HMGB2-201ENST00000296503 ANKRD26Q9UPS8 1709 aa16.42■□□□□ 0.22
HMGB2-201ENST00000296503 TRIM37O94972 964 aa16.42■□□□□ 0.22
HMGB2-201ENST00000296503 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
HMGB2-201ENST00000296503 PEAK1Q9H792 1746 aa16.41■□□□□ 0.22
HMGB2-201ENST00000296503 DISP2A7MBM2 1401 aa16.41■□□□□ 0.22
HMGB2-201ENST00000296503 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
HMGB2-201ENST00000296503 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.22
HMGB2-201ENST00000296503 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.22
HMGB2-201ENST00000296503 BAG6P46379 1132 aa16.39■□□□□ 0.21
HMGB2-201ENST00000296503 EP400Q96L91 3159 aa16.39■□□□□ 0.21
HMGB2-201ENST00000296503 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
HMGB2-201ENST00000296503 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
HMGB2-201ENST00000296503 DDX54Q8TDD1 881 aaKnown RBP16.38■□□□□ 0.21
HMGB2-201ENST00000296503 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
HMGB2-201ENST00000296503 EIF4A2Q14240 407 aaKnown RBP16.37■□□□□ 0.21
HMGB2-201ENST00000296503 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
HMGB2-201ENST00000296503 WNK3Q9BYP7 1800 aa16.37■□□□□ 0.21
HMGB2-201ENST00000296503 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
HMGB2-201ENST00000296503 APBA3O96018 575 aa16.37■□□□□ 0.21
HMGB2-201ENST00000296503 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
HMGB2-201ENST00000296503 EYA1Q99502 592 aa16.37■□□□□ 0.21
HMGB2-201ENST00000296503 MTHFSP49914 203 aa16.36■□□□□ 0.21
HMGB2-201ENST00000296503 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
HMGB2-201ENST00000296503 EN1Q05925 392 aaPredicted RBP16.35■□□□□ 0.21
HMGB2-201ENST00000296503 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
HMGB2-201ENST00000296503 DDX10Q13206 875 aaKnown RBP16.34■□□□□ 0.21
HMGB2-201ENST00000296503 ACSBG1Q96GR2 724 aa16.33■□□□□ 0.2
HMGB2-201ENST00000296503 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
HMGB2-201ENST00000296503 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms