RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
PBRM1-201ENST00000296302 PDRG1Q9NUG6 133 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 BLOC1S2Q6QNY1 142 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 VPS37DQ86XT2 251 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 SLC12A5Q9H2X9 1139 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 NKTRP30414 1462 aaKnown RBP13.05□□□□□ -0.32
PBRM1-201ENST00000296302 TXLNAP40222 546 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 EPS15P42566 896 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
PBRM1-201ENST00000296302 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 FILIP1Q7Z7B0 1213 aa13.05□□□□□ -0.32
PBRM1-201ENST00000296302 UPF3BQ9BZI7 483 aaKnown RBP13.05□□□□□ -0.32
PBRM1-201ENST00000296302 TMEM57Q8N5G2 664 aa13.04□□□□□ -0.32
PBRM1-201ENST00000296302 DNAJC2Q99543 621 aaKnown RBP13.04□□□□□ -0.32
PBRM1-201ENST00000296302 NAIPQ13075 1403 aa13.04□□□□□ -0.32
PBRM1-201ENST00000296302 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
PBRM1-201ENST00000296302 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
PBRM1-201ENST00000296302 XPCQ01831 940 aaPredicted RBP13.04□□□□□ -0.32
PBRM1-201ENST00000296302 TMCO3Q6UWJ1 677 aa13.04□□□□□ -0.32
PBRM1-201ENST00000296302 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
PBRM1-201ENST00000296302 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
PBRM1-201ENST00000296302 CLCN1P35523 988 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 RARSP54136 660 aaKnown RBP13.03□□□□□ -0.32
PBRM1-201ENST00000296302 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
PBRM1-201ENST00000296302 PTPN14Q15678 1187 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 CT47A1Q5JQC4 288 aaPredicted RBP13.03□□□□□ -0.32
PBRM1-201ENST00000296302 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 C9orf84Q5VXU9 1444 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 GOLGA6L10A6NI86 522 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 KRT32Q14532 448 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 TXLNBQ8N3L3 684 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
PBRM1-201ENST00000296302 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 CBX1P83916 185 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 RAPGEF4Q8WZA2 1011 aa13.03□□□□□ -0.32
PBRM1-201ENST00000296302 STK3Q13188 491 aa13.02□□□□□ -0.32
PBRM1-201ENST00000296302 JAKMIP1Q96N16 626 aaKnown RBP13.02□□□□□ -0.32
PBRM1-201ENST00000296302 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.32
PBRM1-201ENST00000296302 LUC7LQ9NQ29 371 aaKnown RBP13.02□□□□□ -0.32
PBRM1-201ENST00000296302 TCEAL9Q9UHQ7 104 aa13.02□□□□□ -0.32
PBRM1-201ENST00000296302 DEF6Q9H4E7 631 aa13.02□□□□□ -0.32
PBRM1-201ENST00000296302 FCHSD2O94868 740 aa13.02□□□□□ -0.33
PBRM1-201ENST00000296302 IQCEQ6IPM2 695 aa13.02□□□□□ -0.33
PBRM1-201ENST00000296302 KIF18AQ8NI77 898 aa13.02□□□□□ -0.33
PBRM1-201ENST00000296302 GBP3Q9H0R5 595 aa13.02□□□□□ -0.33
PBRM1-201ENST00000296302 DHX29Q7Z478 1369 aaKnown RBP13.02□□□□□ -0.33
PBRM1-201ENST00000296302 ERICH4A6NGS2 130 aa13.02□□□□□ -0.33
PBRM1-201ENST00000296302 ATP2B1P20020 1258 aa13.02□□□□□ -0.33
PBRM1-201ENST00000296302 SSFA2P28290 1259 aa13.02□□□□□ -0.33
PBRM1-201ENST00000296302 CALCOCO1Q9P1Z2 691 aa13.01□□□□□ -0.33
PBRM1-201ENST00000296302 PRDM2Q13029 1718 aa13.01□□□□□ -0.33
PBRM1-201ENST00000296302 PSME1Q06323 249 aa13.01□□□□□ -0.33
PBRM1-201ENST00000296302 HDGFL1Q5TGJ6 251 aa13.01□□□□□ -0.33
PBRM1-201ENST00000296302 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
PBRM1-201ENST00000296302 ERLIN2O94905 339 aa13.01□□□□□ -0.33
PBRM1-201ENST00000296302 DAPK1P53355 1430 aa13.01□□□□□ -0.33
PBRM1-201ENST00000296302 ALDH1L2Q3SY69 923 aa13.01□□□□□ -0.33
PBRM1-201ENST00000296302 SKAP1Q86WV1 359 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
PBRM1-201ENST00000296302 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 SCAND2PQ9GZW5 306 aaPredicted RBP13□□□□□ -0.33
PBRM1-201ENST00000296302 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
PBRM1-201ENST00000296302 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 SFPQP23246 707 aaKnown RBP eCLIP13□□□□□ -0.33
PBRM1-201ENST00000296302 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
PBRM1-201ENST00000296302 GOLGA6L7A0A1B0GV03 622 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 NEMFO60524 1076 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 HSP90AB2PQ58FF8 381 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 CCDC181Q5TID7 509 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 PRDM10Q9NQV6 1147 aa13□□□□□ -0.33
PBRM1-201ENST00000296302 STIM1Q13586 685 aa12.99□□□□□ -0.33
PBRM1-201ENST00000296302 TRIM22Q8IYM9 498 aa12.99□□□□□ -0.33
PBRM1-201ENST00000296302 ABCC11Q96J66 1382 aa12.99□□□□□ -0.33
PBRM1-201ENST00000296302 TRIM34Q9BYJ4 488 aa12.99□□□□□ -0.33
PBRM1-201ENST00000296302 ZSCAN12O43309 604 aa12.99□□□□□ -0.33
PBRM1-201ENST00000296302 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
PBRM1-201ENST00000296302 ODF2Q5BJF6 829 aa12.99□□□□□ -0.33
PBRM1-201ENST00000296302 CCDC102AQ96A19 550 aa12.99□□□□□ -0.33
PBRM1-201ENST00000296302 NLRP6P59044 892 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 UVSSAQ2YD98 709 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 CDKL5O76039 1030 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
PBRM1-201ENST00000296302 ANO10Q9NW15 660 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 EVA1CP58658 441 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 SULT6B1Q6IMI4 303 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
PBRM1-201ENST00000296302 RAD21O60216 631 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 NFE2L2Q16236 605 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 HSP90AB3PQ58FF7 597 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 DUSP27Q5VZP5 1158 aa12.98□□□□□ -0.33
PBRM1-201ENST00000296302 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
PBRM1-201ENST00000296302 SKIDA1Q1XH10 827 aa12.97□□□□□ -0.33
PBRM1-201ENST00000296302 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
PBRM1-201ENST00000296302 CCDC158Q5M9N0 1113 aa12.97□□□□□ -0.33
PBRM1-201ENST00000296302 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms