RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CDK12Q9NYV4 1490 aaPredicted RBP36.9■■■■□ 3.5
SSU72-201ENST00000291386 ZBTB7CA1YPR0 619 aa36.9■■■■□ 3.5
SSU72-201ENST00000291386 GLI3P10071 1580 aa36.88■■■■□ 3.49
SSU72-201ENST00000291386 AXIN2Q9Y2T1 843 aa36.88■■■■□ 3.49
SSU72-201ENST00000291386 RGPD5Q99666 1765 aa36.88■■■■□ 3.49
SSU72-201ENST00000291386 AMER1Q5JTC6 1135 aaPredicted RBP36.87■■■■□ 3.49
SSU72-201ENST00000291386 EVA1CP58658 441 aa36.85■■■■□ 3.49
SSU72-201ENST00000291386 MAP3K19Q56UN5 1328 aa36.85■■■■□ 3.49
SSU72-201ENST00000291386 STRN4Q9NRL3 753 aa36.84■■■■□ 3.49
SSU72-201ENST00000291386 SPATA31A5Q5VU36 1347 aa36.84■■■■□ 3.49
SSU72-201ENST00000291386 SPATA31A7Q8IWB4 1347 aa36.84■■■■□ 3.49
SSU72-201ENST00000291386 FBLN1P23142 703 aa36.83■■■■□ 3.49
SSU72-201ENST00000291386 NPC1L1Q9UHC9 1359 aa36.82■■■■□ 3.49
SSU72-201ENST00000291386 IP6K1Q92551 441 aa36.82■■■■□ 3.48
SSU72-201ENST00000291386 RTL1A6NKG5 1358 aa36.81■■■■□ 3.48
SSU72-201ENST00000291386 BLMP54132 1417 aaPredicted RBP36.81■■■■□ 3.48
SSU72-201ENST00000291386 KIF24Q5T7B8 1368 aa36.8■■■■□ 3.48
SSU72-201ENST00000291386 CCDC9Q9Y3X0 531 aaKnown RBP36.8■■■■□ 3.48
SSU72-201ENST00000291386 SPATA31A1Q5TZJ5 1347 aa36.79■■■■□ 3.48
SSU72-201ENST00000291386 RRS1Q15050 365 aaKnown RBP36.78■■■■□ 3.48
SSU72-201ENST00000291386 LARP1Q6PKG0 1096 aaKnown RBP36.78■■■■□ 3.48
SSU72-201ENST00000291386 WDR17Q8IZU2 1322 aa36.78■■■■□ 3.48
SSU72-201ENST00000291386 MAP2P11137 1827 aaKnown RBP36.78■■■■□ 3.48
SSU72-201ENST00000291386 ONECUT3O60422 494 aaPredicted RBP36.77■■■■□ 3.48
SSU72-201ENST00000291386 RGS12O14924 1447 aa36.76■■■■□ 3.48
SSU72-201ENST00000291386 CRB1P82279 1406 aa36.76■■■■□ 3.48
SSU72-201ENST00000291386 HOXC9P31274 260 aa36.76■■■■□ 3.48
SSU72-201ENST00000291386 AMPHP49418 695 aa36.75■■■■□ 3.47
SSU72-201ENST00000291386 MORC1Q86VD1 984 aa36.75■■■■□ 3.47
SSU72-201ENST00000291386 ERBB3P21860 1342 aa36.74■■■■□ 3.47
SSU72-201ENST00000291386 PEAK1Q9H792 1746 aa36.73■■■■□ 3.47
SSU72-201ENST00000291386 FLT4P35916 1363 aa36.71■■■■□ 3.47
SSU72-201ENST00000291386 THRAP3Q9Y2W1 955 aaKnown RBP36.71■■■■□ 3.47
SSU72-201ENST00000291386 BARGINQ6ZT62 677 aa36.69■■■■□ 3.46
SSU72-201ENST00000291386 ANKRD24Q8TF21 1146 aa36.69■■■■□ 3.46
SSU72-201ENST00000291386 POLKQ9UBT6 870 aa36.69■■■■□ 3.46
SSU72-201ENST00000291386 FAM208AQ9UK61 1670 aaKnown RBP36.68■■■■□ 3.46
SSU72-201ENST00000291386 TOM1L2Q6ZVM7 507 aa36.68■■■■□ 3.46
SSU72-201ENST00000291386 TCP11L2Q8N4U5 519 aa36.68■■■■□ 3.46
SSU72-201ENST00000291386 EMILIN1Q9Y6C2 1016 aa36.68■■■■□ 3.46
SSU72-201ENST00000291386 CSB-PGBD3P0DP91 1061 aa36.67■■■■□ 3.46
SSU72-201ENST00000291386 CARD10Q9BWT7 1032 aa36.67■■■■□ 3.46
SSU72-201ENST00000291386 INSRP06213 1382 aa36.66■■■■□ 3.46
SSU72-201ENST00000291386 THSD7AQ9UPZ6 1657 aa36.66■■■■□ 3.46
SSU72-201ENST00000291386 SMG6Q86US8 1419 aaKnown RBP36.66■■■■□ 3.46
SSU72-201ENST00000291386 TNNT2P45379 298 aaPredicted RBP36.65■■■■□ 3.46
SSU72-201ENST00000291386 FAM98CQ17RN3 349 aaKnown RBP36.65■■■■□ 3.46
SSU72-201ENST00000291386 CC2D1BQ5T0F9 858 aaKnown RBP36.65■■■■□ 3.46
SSU72-201ENST00000291386 SEPT12Q8IYM1 358 aa36.63■■■■□ 3.45
SSU72-201ENST00000291386 USP35Q9P2H5 1018 aa36.63■■■■□ 3.45
SSU72-201ENST00000291386 HSP90AB2PQ58FF8 381 aa36.62■■■■□ 3.45
SSU72-201ENST00000291386 ZNF316A6NFI3 1004 aaPredicted RBP36.6■■■■□ 3.45
SSU72-201ENST00000291386 WNK3Q9BYP7 1800 aa36.59■■■■□ 3.45
SSU72-201ENST00000291386 DDX10Q13206 875 aaKnown RBP36.59■■■■□ 3.45
SSU72-201ENST00000291386 BRWD3Q6RI45 1802 aa36.59■■■■□ 3.45
SSU72-201ENST00000291386 LTV1Q96GA3 475 aaPredicted RBP36.57■■■■□ 3.44
SSU72-201ENST00000291386 PPM1GO15355 546 aaPredicted RBP36.56■■■■□ 3.44
SSU72-201ENST00000291386 NLRP2Q9NX02 1062 aa36.56■■■■□ 3.44
SSU72-201ENST00000291386 PARP4Q9UKK3 1724 aaKnown RBP36.55■■■■□ 3.44
SSU72-201ENST00000291386 CDCA7Q9BWT1 371 aaPredicted RBP36.54■■■■□ 3.44
SSU72-201ENST00000291386 RGPD2P0DJD1 1756 aa36.53■■■■□ 3.44
SSU72-201ENST00000291386 DISP2A7MBM2 1401 aa36.52■■■■□ 3.44
SSU72-201ENST00000291386 A0A0G2JS52 829 aa36.5■■■■□ 3.43
SSU72-201ENST00000291386 MYT1Q01538 1121 aa36.5■■■■□ 3.43
SSU72-201ENST00000291386 SOCS7O14512 581 aa36.47■■■■□ 3.43
SSU72-201ENST00000291386 NBPF6Q5VWK0 638 aa36.47■■■■□ 3.43
SSU72-201ENST00000291386 KRT27Q7Z3Y8 459 aa36.47■■■■□ 3.43
SSU72-201ENST00000291386 NBPF4Q96M43 638 aa36.47■■■■□ 3.43
SSU72-201ENST00000291386 MTHFSP49914 203 aa36.45■■■■□ 3.43
SSU72-201ENST00000291386 CNGB1Q14028 1251 aaPredicted RBP36.45■■■■□ 3.43
SSU72-201ENST00000291386 LRRC37A3O60309 1634 aa36.45■■■■□ 3.42
SSU72-201ENST00000291386 NCAPD2Q15021 1401 aa36.44■■■■□ 3.42
SSU72-201ENST00000291386 EIF4A2Q14240 407 aaKnown RBP36.44■■■■□ 3.42
SSU72-201ENST00000291386 PARD3Q8TEW0 1356 aa36.43■■■■□ 3.42
SSU72-201ENST00000291386 IL2RBP14784 551 aa36.43■■■■□ 3.42
SSU72-201ENST00000291386 DDB1Q16531 1140 aa36.39■■■■□ 3.42
SSU72-201ENST00000291386 EYA1Q99502 592 aa36.38■■■■□ 3.41
SSU72-201ENST00000291386 PPP2R1AP30153 589 aa36.37■■■■□ 3.41
SSU72-201ENST00000291386 PDE3BQ13370 1112 aa36.37■■■■□ 3.41
SSU72-201ENST00000291386 TNS2Q63HR2 1409 aa36.34■■■■□ 3.41
SSU72-201ENST00000291386 EXOC5O00471 708 aa36.34■■■■□ 3.41
SSU72-201ENST00000291386 IL13P35225 146 aa36.34■■■■□ 3.41
SSU72-201ENST00000291386 RALBP1Q15311 655 aa36.34■■■■□ 3.41
SSU72-201ENST00000291386 USHBP1Q8N6Y0 703 aa36.34■■■■□ 3.41
SSU72-201ENST00000291386 IGSF1Q8N6C5 1336 aa36.34■■■■□ 3.41
SSU72-201ENST00000291386 RGPD1P0DJD0 1748 aa36.32■■■■□ 3.4
SSU72-201ENST00000291386 MEGF6O75095 1541 aa36.32■■■■□ 3.4
SSU72-201ENST00000291386 COL3A1P02461 1466 aaPredicted RBP36.31■■■■□ 3.4
SSU72-201ENST00000291386 OVOS2A0A0G2JMS6 1433 aa36.3■■■■□ 3.4
SSU72-201ENST00000291386 UPF1Q92900 1129 aaKnown RBP eCLIP36.29■■■■□ 3.43e-8■□□□□ 8.4
SSU72-201ENST00000291386 RAPGEF4Q8WZA2 1011 aa36.28■■■■□ 3.4
SSU72-201ENST00000291386 FAM196AQ6ZSG2 479 aa36.27■■■■□ 3.4
SSU72-201ENST00000291386 DIAPH1O60610 1272 aaKnown RBP36.26■■■■□ 3.4
SSU72-201ENST00000291386 TATP17735 454 aaPredicted RBP36.26■■■■□ 3.4
SSU72-201ENST00000291386 PLEKHG2Q9H7P9 1386 aa36.26■■■■□ 3.39
SSU72-201ENST00000291386 MARCH10Q8NA82 808 aaPredicted RBP36.25■■■■□ 3.39
SSU72-201ENST00000291386 BCL9O00512 1426 aa36.25■■■■□ 3.39
SSU72-201ENST00000291386 FAM182BQ5T319 152 aa36.24■■■■□ 3.39
SSU72-201ENST00000291386 CFAP53Q96M91 514 aa36.24■■■■□ 3.39
SSU72-201ENST00000291386 SHANK3Q9BYB0 1731 aa36.22■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms