RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 STRN4Q9NRL3 753 aa12.83□□□□□ -0.36
PPP4R1-201ENST00000285124 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
PPP4R1-201ENST00000285124 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
PPP4R1-201ENST00000285124 MCM10Q7L590 875 aa12.82□□□□□ -0.36
PPP4R1-201ENST00000285124 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
PPP4R1-201ENST00000285124 AATKQ6ZMQ8 1374 aa12.82□□□□□ -0.36
PPP4R1-201ENST00000285124 TCERG1O14776 1098 aaKnown RBP12.82□□□□□ -0.36
PPP4R1-201ENST00000285124 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
PPP4R1-201ENST00000285124 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
PPP4R1-201ENST00000285124 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
PPP4R1-201ENST00000285124 BLMP54132 1417 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-201ENST00000285124 ADAMTS2O95450 1211 aa12.81□□□□□ -0.36
PPP4R1-201ENST00000285124 FMN2Q9NZ56 1722 aa12.81□□□□□ -0.36
PPP4R1-201ENST00000285124 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
PPP4R1-201ENST00000285124 IP6K1Q92551 441 aa12.81□□□□□ -0.36
PPP4R1-201ENST00000285124 FLT4P35916 1363 aa12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 DUSP27Q5VZP5 1158 aa12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 ARHGEF25Q86VW2 580 aa12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 MAP2P11137 1827 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 SLFN5Q08AF3 891 aa12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 USP31Q70CQ4 1352 aa12.8□□□□□ -0.36
PPP4R1-201ENST00000285124 PDE3BQ13370 1112 aa12.79□□□□□ -0.36
PPP4R1-201ENST00000285124 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
PPP4R1-201ENST00000285124 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-201ENST00000285124 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-201ENST00000285124 NWD1Q149M9 1564 aa12.78□□□□□ -0.36
PPP4R1-201ENST00000285124 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
PPP4R1-201ENST00000285124 BCAR3O75815 825 aa12.78□□□□□ -0.36
PPP4R1-201ENST00000285124 EVA1CP58658 441 aa12.77□□□□□ -0.36
PPP4R1-201ENST00000285124 KIAA0232Q92628 1395 aa12.77□□□□□ -0.37
PPP4R1-201ENST00000285124 E9PSI1 815 aa12.77□□□□□ -0.37
PPP4R1-201ENST00000285124 TOM1O60784 492 aa12.77□□□□□ -0.37
PPP4R1-201ENST00000285124 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
PPP4R1-201ENST00000285124 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
PPP4R1-201ENST00000285124 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
PPP4R1-201ENST00000285124 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
PPP4R1-201ENST00000285124 TOPAZ1Q8N9V7 1692 aa12.75□□□□□ -0.37
PPP4R1-201ENST00000285124 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-201ENST00000285124 COL3A1P02461 1466 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-201ENST00000285124 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-201ENST00000285124 AKAP12Q02952 1782 aa12.75□□□□□ -0.37
PPP4R1-201ENST00000285124 SMG6Q86US8 1419 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-201ENST00000285124 TOM1L2Q6ZVM7 507 aa12.75□□□□□ -0.37
PPP4R1-201ENST00000285124 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
PPP4R1-201ENST00000285124 PIK3C2AO00443 1686 aa12.74□□□□□ -0.37
PPP4R1-201ENST00000285124 NCOA3Q9Y6Q9 1424 aa12.74□□□□□ -0.37
PPP4R1-201ENST00000285124 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
PPP4R1-201ENST00000285124 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 A0A0G2JS52 829 aa12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 INSRP06213 1382 aa12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 CDK12Q9NYV4 1490 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 DCCP43146 1447 aa12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 NECTIN2Q92692 538 aa12.73□□□□□ -0.37
PPP4R1-201ENST00000285124 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
PPP4R1-201ENST00000285124 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
PPP4R1-201ENST00000285124 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-201ENST00000285124 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-201ENST00000285124 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
PPP4R1-201ENST00000285124 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.37
PPP4R1-201ENST00000285124 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
PPP4R1-201ENST00000285124 IGSF1Q8N6C5 1336 aa12.71□□□□□ -0.37
PPP4R1-201ENST00000285124 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
PPP4R1-201ENST00000285124 RRP1P56182 461 aaKnown RBP12.71□□□□□ -0.38
PPP4R1-201ENST00000285124 TSPYL6Q8N831 410 aa12.71□□□□□ -0.38
PPP4R1-201ENST00000285124 LGR6Q9HBX8 967 aa12.71□□□□□ -0.38
PPP4R1-201ENST00000285124 USP19O94966 1318 aa12.71□□□□□ -0.38
PPP4R1-201ENST00000285124 LARP1Q6PKG0 1096 aaKnown RBP12.7□□□□□ -0.38
PPP4R1-201ENST00000285124 EXOC6Q8TAG9 804 aa12.7□□□□□ -0.38
PPP4R1-201ENST00000285124 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
PPP4R1-201ENST00000285124 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
PPP4R1-201ENST00000285124 ERBB3P21860 1342 aa12.7□□□□□ -0.38
PPP4R1-201ENST00000285124 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
PPP4R1-201ENST00000285124 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
PPP4R1-201ENST00000285124 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
PPP4R1-201ENST00000285124 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
PPP4R1-201ENST00000285124 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
PPP4R1-201ENST00000285124 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
PPP4R1-201ENST00000285124 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
PPP4R1-201ENST00000285124 PHF23Q9BUL5 403 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-201ENST00000285124 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
PPP4R1-201ENST00000285124 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
PPP4R1-201ENST00000285124 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 C8orf58Q8NAV2 365 aa12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 SMC4Q9NTJ3 1288 aa12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 LMOD3Q0VAK6 560 aa12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 PLEKHO1Q53GL0 409 aaPredicted RBP12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 CERKQ8TCT0 537 aa12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
PPP4R1-201ENST00000285124 ANKRD26Q9UPS8 1709 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms