RNA–Protein interactions for RNA: ENST00000281589.4

PABPC3-201, Transcript of poly(A) binding protein cytoplasmic 3, humanhuman

APPRIS P1 BASIC

Gene PABPC3, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC3-201ENST00000281589 ZNF500O60304 480 aaPredicted RBP11.31□□□□□ -0.6
PABPC3-201ENST00000281589 SRPK2P78362 688 aaKnown RBP11.31□□□□□ -0.6
PABPC3-201ENST00000281589 IDI1Q13907 227 aa11.31□□□□□ -0.6
PABPC3-201ENST00000281589 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
PABPC3-201ENST00000281589 CEP120Q8N960 986 aa11.31□□□□□ -0.6
PABPC3-201ENST00000281589 NKTRP30414 1462 aaKnown RBP11.31□□□□□ -0.6
PABPC3-201ENST00000281589 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
PABPC3-201ENST00000281589 IFT172Q9UG01 1749 aa11.3□□□□□ -0.6
PABPC3-201ENST00000281589 MINK1Q8N4C8 1332 aaPredicted RBP11.3□□□□□ -0.6
PABPC3-201ENST00000281589 NSD3Q9BZ95 1437 aa11.3□□□□□ -0.6
PABPC3-201ENST00000281589 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
PABPC3-201ENST00000281589 CCDC173Q0VFZ6 552 aa11.3□□□□□ -0.6
PABPC3-201ENST00000281589 EFCC1Q9HA90 598 aa11.3□□□□□ -0.6
PABPC3-201ENST00000281589 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
PABPC3-201ENST00000281589 EFCAB6Q5THR3 1501 aa11.3□□□□□ -0.6
PABPC3-201ENST00000281589 NEURL4Q96JN8 1562 aa11.3□□□□□ -0.6
PABPC3-201ENST00000281589 PPRC1Q5VV67 1664 aaKnown RBP11.3□□□□□ -0.6
PABPC3-201ENST00000281589 BECN1Q14457 450 aa11.29□□□□□ -0.6
PABPC3-201ENST00000281589 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
PABPC3-201ENST00000281589 POGZQ7Z3K3 1410 aa11.29□□□□□ -0.6
PABPC3-201ENST00000281589 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
PABPC3-201ENST00000281589 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
PABPC3-201ENST00000281589 BCL2L13Q9BXK5 485 aa11.28□□□□□ -0.6
PABPC3-201ENST00000281589 C14orf93Q9H972 538 aaKnown RBP11.28□□□□□ -0.6
PABPC3-201ENST00000281589 CEP83Q9Y592 693 aa11.28□□□□□ -0.6
PABPC3-201ENST00000281589 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
PABPC3-201ENST00000281589 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
PABPC3-201ENST00000281589 MTHFSP49914 203 aa11.28□□□□□ -0.6
PABPC3-201ENST00000281589 FEZ2Q9UHY8 353 aaPredicted RBP11.28□□□□□ -0.6
PABPC3-201ENST00000281589 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.6
PABPC3-201ENST00000281589 KIF3AQ9Y496 699 aa11.27□□□□□ -0.6
PABPC3-201ENST00000281589 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.61
PABPC3-201ENST00000281589 SATB1Q01826 763 aa11.27□□□□□ -0.61
PABPC3-201ENST00000281589 YEATS2Q9ULM3 1422 aa11.27□□□□□ -0.61
PABPC3-201ENST00000281589 GOLIM4O00461 696 aa11.27□□□□□ -0.61
PABPC3-201ENST00000281589 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.61
PABPC3-201ENST00000281589 MYCBPQ99417 103 aaPredicted RBP11.27□□□□□ -0.61
PABPC3-201ENST00000281589 GGNBP2Q9H3C7 697 aa11.27□□□□□ -0.61
PABPC3-201ENST00000281589 KCNA4P22459 653 aa11.26□□□□□ -0.61
PABPC3-201ENST00000281589 NRXN1Q9ULB1 1477 aa11.26□□□□□ -0.61
PABPC3-201ENST00000281589 U2AF1L5P0DN76 240 aaPredicted RBP11.26□□□□□ -0.61
PABPC3-201ENST00000281589 U2AF1Q01081 240 aaKnown RBP eCLIP11.26□□□□□ -0.61
PABPC3-201ENST00000281589 PSMD1Q99460 953 aa11.26□□□□□ -0.61
PABPC3-201ENST00000281589 MYRIPQ8NFW9 859 aa11.25□□□□□ -0.61
PABPC3-201ENST00000281589 TSPYL1Q9H0U9 437 aa11.25□□□□□ -0.61
PABPC3-201ENST00000281589 NOL7Q9UMY1 257 aaKnown RBP11.25□□□□□ -0.61
PABPC3-201ENST00000281589 SLFN14P0C7P3 912 aa11.25□□□□□ -0.61
PABPC3-201ENST00000281589 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
PABPC3-201ENST00000281589 NCAPGQ9BPX3 1015 aa11.25□□□□□ -0.61
PABPC3-201ENST00000281589 ADGRB3O60242 1522 aa11.25□□□□□ -0.61
PABPC3-201ENST00000281589 SHPRHQ149N8 1683 aa11.25□□□□□ -0.61
PABPC3-201ENST00000281589 MAP2K1Q02750 393 aaPredicted RBP11.25□□□□□ -0.61
PABPC3-201ENST00000281589 IGHDP01880 384 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 CCDC172P0C7W6 258 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 NOP2P46087 812 aaKnown RBP11.24□□□□□ -0.61
PABPC3-201ENST00000281589 SMC4Q9NTJ3 1288 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 POLR3AO14802 1390 aaPredicted RBP11.24□□□□□ -0.61
PABPC3-201ENST00000281589 U2AF2P26368 475 aaKnown RBP eCLIP11.24□□□□□ -0.61
PABPC3-201ENST00000281589 CSPP1Q1MSJ5 1256 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 SGSM3Q96HU1 749 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 USP19O94966 1318 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 EVC2Q86UK5 1308 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 FBLN1P23142 703 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 PANK1Q8TE04 598 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 CLUAP1Q96AJ1 413 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 QRICH2Q9H0J4 1663 aa11.24□□□□□ -0.61
PABPC3-201ENST00000281589 SBNO2Q9Y2G9 1366 aa11.23□□□□□ -0.61
PABPC3-201ENST00000281589 ZC3H13Q5T200 1668 aaKnown RBP11.23□□□□□ -0.61
PABPC3-201ENST00000281589 TCP11L2Q8N4U5 519 aa11.23□□□□□ -0.61
PABPC3-201ENST00000281589 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
PABPC3-201ENST00000281589 GTF2A1P52655 376 aaPredicted RBP11.23□□□□□ -0.61
PABPC3-201ENST00000281589 TMX1Q9H3N1 280 aa11.23□□□□□ -0.61
PABPC3-201ENST00000281589 CGNL1Q0VF96 1302 aa11.23□□□□□ -0.61
PABPC3-201ENST00000281589 COG6Q9Y2V7 657 aa11.22□□□□□ -0.61
PABPC3-201ENST00000281589 FRMPD1Q5SYB0 1578 aa11.22□□□□□ -0.61
PABPC3-201ENST00000281589 SETBP1Q9Y6X0 1596 aa11.22□□□□□ -0.61
PABPC3-201ENST00000281589 LMTK2Q8IWU2 1503 aa11.22□□□□□ -0.61
PABPC3-201ENST00000281589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.22□□□□□ -0.61
PABPC3-201ENST00000281589 GABPB1Q06547 395 aaPredicted RBP11.22□□□□□ -0.61
PABPC3-201ENST00000281589 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
PABPC3-201ENST00000281589 PPLO60437 1756 aa11.22□□□□□ -0.61
PABPC3-201ENST00000281589 TNNQ9UQP3 1299 aa11.21□□□□□ -0.61
PABPC3-201ENST00000281589 DNAJC21Q5F1R6 531 aaKnown RBP11.21□□□□□ -0.62
PABPC3-201ENST00000281589 BORCS6Q96GS4 357 aa11.21□□□□□ -0.62
PABPC3-201ENST00000281589 HECW2Q9P2P5 1572 aa11.21□□□□□ -0.62
PABPC3-201ENST00000281589 MLH3Q9UHC1 1453 aa11.21□□□□□ -0.62
PABPC3-201ENST00000281589 ABCC3O15438 1527 aa11.21□□□□□ -0.62
PABPC3-201ENST00000281589 ZNF526Q8TF50 670 aaPredicted RBP11.2□□□□□ -0.62
PABPC3-201ENST00000281589 RSPH14Q9UHP6 348 aa11.2□□□□□ -0.62
PABPC3-201ENST00000281589 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
PABPC3-201ENST00000281589 TNNT3P45378 269 aaPredicted RBP11.2□□□□□ -0.62
PABPC3-201ENST00000281589 NASPP49321 788 aaPredicted RBP11.2□□□□□ -0.62
PABPC3-201ENST00000281589 PDE3AQ14432 1141 aa11.2□□□□□ -0.62
PABPC3-201ENST00000281589 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
PABPC3-201ENST00000281589 CALCOCO1Q9P1Z2 691 aa11.2□□□□□ -0.62
PABPC3-201ENST00000281589 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
PABPC3-201ENST00000281589 HS1BP3Q53T59 392 aa11.2□□□□□ -0.62
PABPC3-201ENST00000281589 WAPLQ7Z5K2 1190 aa11.2□□□□□ -0.62
PABPC3-201ENST00000281589 PDCL2Q8N4E4 241 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms