RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
OTOF-201ENST00000272371 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
OTOF-201ENST00000272371 IGF1RP08069 1367 aa12.5□□□□□ -0.41
OTOF-201ENST00000272371 STK38Q15208 465 aa12.5□□□□□ -0.41
OTOF-201ENST00000272371 MAP9Q49MG5 647 aa12.5□□□□□ -0.41
OTOF-201ENST00000272371 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
OTOF-201ENST00000272371 CCAR1Q8IX12 1150 aaKnown RBP12.49□□□□□ -0.41
OTOF-201ENST00000272371 RUNDC1Q96C34 613 aa12.49□□□□□ -0.41
OTOF-201ENST00000272371 CFAP45Q9UL16 551 aa12.49□□□□□ -0.41
OTOF-201ENST00000272371 CNTLNQ9NXG0 1405 aa12.49□□□□□ -0.41
OTOF-201ENST00000272371 RIPK4P57078 832 aa12.49□□□□□ -0.41
OTOF-201ENST00000272371 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
OTOF-201ENST00000272371 KDM4AO75164 1064 aa12.49□□□□□ -0.41
OTOF-201ENST00000272371 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
OTOF-201ENST00000272371 CASQ1P31415 396 aa12.49□□□□□ -0.41
OTOF-201ENST00000272371 PRG4Q92954 1404 aaPredicted RBP12.49□□□□□ -0.41
OTOF-201ENST00000272371 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
OTOF-201ENST00000272371 FILIP1Q7Z7B0 1213 aa12.49□□□□□ -0.41
OTOF-201ENST00000272371 NF2P35240 595 aa12.48□□□□□ -0.41
OTOF-201ENST00000272371 TRAK1Q9UPV9 953 aa12.48□□□□□ -0.41
OTOF-201ENST00000272371 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
OTOF-201ENST00000272371 TXLNAP40222 546 aa12.48□□□□□ -0.41
OTOF-201ENST00000272371 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
OTOF-201ENST00000272371 DYNC1I1O14576 645 aa12.48□□□□□ -0.41
OTOF-201ENST00000272371 NECTIN2Q92692 538 aa12.48□□□□□ -0.41
OTOF-201ENST00000272371 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
OTOF-201ENST00000272371 KRT85P78386 507 aa12.48□□□□□ -0.41
OTOF-201ENST00000272371 KIF18AQ8NI77 898 aa12.48□□□□□ -0.41
OTOF-201ENST00000272371 SYCE3A1L190 88 aa12.47□□□□□ -0.41
OTOF-201ENST00000272371 MCM3P25205 808 aa12.47□□□□□ -0.41
OTOF-201ENST00000272371 CTDP1Q9Y5B0 961 aaPredicted RBP12.47□□□□□ -0.41
OTOF-201ENST00000272371 DISP3Q9P2K9 1392 aa12.47□□□□□ -0.41
OTOF-201ENST00000272371 C1orf141Q5JVX7 400 aa12.47□□□□□ -0.41
OTOF-201ENST00000272371 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
OTOF-201ENST00000272371 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
OTOF-201ENST00000272371 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
OTOF-201ENST00000272371 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
OTOF-201ENST00000272371 JMYQ8N9B5 988 aa12.46□□□□□ -0.42
OTOF-201ENST00000272371 ME1P48163 572 aa12.46□□□□□ -0.42
OTOF-201ENST00000272371 DNAAF4Q8WXU2 420 aa12.46□□□□□ -0.42
OTOF-201ENST00000272371 KIAA1328Q86T90 577 aa12.46□□□□□ -0.42
OTOF-201ENST00000272371 CDK5RAP3Q96JB5 506 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
OTOF-201ENST00000272371 MNAT1P51948 309 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 CFTRP13569 1480 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 SMTNL1A8MU46 457 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 CCDC91Q7Z6B0 441 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 DDX58O95786 925 aaKnown RBP12.45□□□□□ -0.42
OTOF-201ENST00000272371 STIM1Q13586 685 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
OTOF-201ENST00000272371 UPF3BQ9BZI7 483 aaKnown RBP12.45□□□□□ -0.42
OTOF-201ENST00000272371 WASHC4Q2M389 1173 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 JAKMIP3Q5VZ66 844 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 HMGXB3Q12766 1538 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 TXNDC2Q86VQ3 553 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 BICRAQ9NZM4 1560 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 ADAMTS2O95450 1211 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 ARHGAP29Q52LW3 1261 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 STRN4Q9NRL3 753 aa12.44□□□□□ -0.42
OTOF-201ENST00000272371 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
OTOF-201ENST00000272371 FSD1Q9BTV5 496 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 HIP1O00291 1037 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 ZSCAN12O43309 604 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 COG3Q96JB2 828 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 SPATA32Q96LK8 384 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 ATP2B1P20020 1258 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 TEFQ10587 303 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 VPS37DQ86XT2 251 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 LMAN1P49257 510 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 ANKRD1Q15327 319 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
OTOF-201ENST00000272371 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
OTOF-201ENST00000272371 MAP3K11Q16584 847 aa12.42□□□□□ -0.42
OTOF-201ENST00000272371 CEP63Q96MT8 703 aa12.42□□□□□ -0.42
OTOF-201ENST00000272371 CCDC144AA2RUR9 1427 aa12.42□□□□□ -0.42
OTOF-201ENST00000272371 GNAI1P63096 354 aa12.42□□□□□ -0.42
OTOF-201ENST00000272371 TANGO6Q9C0B7 1094 aa12.42□□□□□ -0.42
OTOF-201ENST00000272371 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
OTOF-201ENST00000272371 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
OTOF-201ENST00000272371 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
OTOF-201ENST00000272371 STK3Q13188 491 aa12.41□□□□□ -0.42
OTOF-201ENST00000272371 SPATA24Q86W54 205 aa12.41□□□□□ -0.42
OTOF-201ENST00000272371 TAF4BQ92750 862 aa12.41□□□□□ -0.42
OTOF-201ENST00000272371 ZFP91Q96JP5 570 aaPredicted RBP12.41□□□□□ -0.42
OTOF-201ENST00000272371 CCDC113Q9H0I3 377 aa12.41□□□□□ -0.42
OTOF-201ENST00000272371 KIF5CO60282 957 aa12.41□□□□□ -0.42
OTOF-201ENST00000272371 LARP1BQ659C4 914 aaKnown RBP12.41□□□□□ -0.42
OTOF-201ENST00000272371 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
OTOF-201ENST00000272371 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
OTOF-201ENST00000272371 LUZP1Q86V48 1076 aa12.4□□□□□ -0.42
OTOF-201ENST00000272371 SMARCC1Q92922 1105 aaPredicted RBP12.4□□□□□ -0.42
OTOF-201ENST00000272371 NEUROD6Q96NK8 337 aa12.4□□□□□ -0.42
OTOF-201ENST00000272371 LAMC3Q9Y6N6 1575 aa12.4□□□□□ -0.42
OTOF-201ENST00000272371 EVC2Q86UK5 1308 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms