RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ITSN1Q15811 1721 aa19.11■□□□□ 0.65
SGCA-201ENST00000262018 ACEP12821 1306 aa19.1■□□□□ 0.65
SGCA-201ENST00000262018 LRRC37A3O60309 1634 aa19.09■□□□□ 0.65
SGCA-201ENST00000262018 USP19O94966 1318 aa19.09■□□□□ 0.65
SGCA-201ENST00000262018 GCP02774 474 aa19.08■□□□□ 0.65
SGCA-201ENST00000262018 MARCH10Q8NA82 808 aaPredicted RBP19.08■□□□□ 0.65
SGCA-201ENST00000262018 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
SGCA-201ENST00000262018 NLRP13Q86W25 1043 aa19.07■□□□□ 0.64
SGCA-201ENST00000262018 POLR3AO14802 1390 aaPredicted RBP19.07■□□□□ 0.64
SGCA-201ENST00000262018 PELP1Q8IZL8 1130 aaKnown RBP19.06■□□□□ 0.64
SGCA-201ENST00000262018 CDK19Q9BWU1 502 aa19.06■□□□□ 0.64
SGCA-201ENST00000262018 MAP3K5Q99683 1374 aa19.06■□□□□ 0.64
SGCA-201ENST00000262018 KLHL34Q8N239 644 aa19.05■□□□□ 0.64
SGCA-201ENST00000262018 KDM2AQ9Y2K7 1162 aa19.03■□□□□ 0.64
SGCA-201ENST00000262018 CCDC61Q9Y6R9 512 aa19.03■□□□□ 0.64
SGCA-201ENST00000262018 CEP350Q5VT06 3117 aa19.03■□□□□ 0.64
SGCA-201ENST00000262018 BCL9O00512 1426 aa19.02■□□□□ 0.64
SGCA-201ENST00000262018 PLEKHG3A1L390 1219 aa19.01■□□□□ 0.63
SGCA-201ENST00000262018 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
SGCA-201ENST00000262018 CDCA7Q9BWT1 371 aaPredicted RBP19■□□□□ 0.63
SGCA-201ENST00000262018 SHANK3Q9BYB0 1731 aa18.99■□□□□ 0.63
SGCA-201ENST00000262018 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
SGCA-201ENST00000262018 TOPAZ1Q8N9V7 1692 aa18.97■□□□□ 0.63
SGCA-201ENST00000262018 DCAF11Q8TEB1 546 aa18.97■□□□□ 0.63
SGCA-201ENST00000262018 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
SGCA-201ENST00000262018 EXOC5O00471 708 aa18.96■□□□□ 0.63
SGCA-201ENST00000262018 NLRP6P59044 892 aa18.96■□□□□ 0.63
SGCA-201ENST00000262018 ARHGEF28Q8N1W1 1705 aaKnown RBP18.95■□□□□ 0.62
SGCA-201ENST00000262018 AXIN2Q9Y2T1 843 aa18.95■□□□□ 0.62
SGCA-201ENST00000262018 WNK3Q9BYP7 1800 aa18.95■□□□□ 0.62
SGCA-201ENST00000262018 POLD1P28340 1107 aa18.94■□□□□ 0.62
SGCA-201ENST00000262018 ZNF827Q17R98 1081 aa18.94■□□□□ 0.62
SGCA-201ENST00000262018 ACSBG1Q96GR2 724 aa18.94■□□□□ 0.62
SGCA-201ENST00000262018 CSB-PGBD3P0DP91 1061 aa18.93■□□□□ 0.62
SGCA-201ENST00000262018 NLGN2Q8NFZ4 835 aa18.92■□□□□ 0.62
SGCA-201ENST00000262018 CARD10Q9BWT7 1032 aa18.92■□□□□ 0.62
SGCA-201ENST00000262018 TIMELESSQ9UNS1 1208 aa18.92■□□□□ 0.62
SGCA-201ENST00000262018 HSPA6P17066 643 aa18.91■□□□□ 0.62
SGCA-201ENST00000262018 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
SGCA-201ENST00000262018 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
SGCA-201ENST00000262018 PAPPAQ13219 1627 aa18.91■□□□□ 0.62
SGCA-201ENST00000262018 GRIN3BO60391 1043 aa18.9■□□□□ 0.62
SGCA-201ENST00000262018 SLC16A10Q8TF71 515 aa18.9■□□□□ 0.62
SGCA-201ENST00000262018 SLIT3O75094 1523 aa18.9■□□□□ 0.62
SGCA-201ENST00000262018 COL18A1P39060 1754 aa18.9■□□□□ 0.62
SGCA-201ENST00000262018 ATP10DQ9P241 1426 aa18.89■□□□□ 0.62
SGCA-201ENST00000262018 YBX3P16989 372 aaKnown RBP eCLIP18.89■□□□□ 0.61
SGCA-201ENST00000262018 SRPK2P78362 688 aaKnown RBP18.89■□□□□ 0.61
SGCA-201ENST00000262018 BRD4O60885 1362 aaPredicted RBP18.88■□□□□ 0.61
SGCA-201ENST00000262018 NHSQ6T4R5 1651 aa18.88■□□□□ 0.61
SGCA-201ENST00000262018 GPBP1L1Q9HC44 474 aaPredicted RBP18.88■□□□□ 0.61
SGCA-201ENST00000262018 LRRC4BQ9NT99 713 aa18.88■□□□□ 0.61
SGCA-201ENST00000262018 TNS2Q63HR2 1409 aa18.87■□□□□ 0.61
SGCA-201ENST00000262018 USP6P35125 1406 aa18.86■□□□□ 0.61
SGCA-201ENST00000262018 CPSF1Q10570 1443 aaKnown RBP18.86■□□□□ 0.61
SGCA-201ENST00000262018 SOX12O15370 315 aa18.85■□□□□ 0.61
SGCA-201ENST00000262018 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
SGCA-201ENST00000262018 ARHGEF25Q86VW2 580 aa18.85■□□□□ 0.61
SGCA-201ENST00000262018 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
SGCA-201ENST00000262018 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
SGCA-201ENST00000262018 CABP2Q9NPB3 220 aa18.85■□□□□ 0.61
SGCA-201ENST00000262018 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
SGCA-201ENST00000262018 PNPLA7Q6ZV29 1317 aa18.84■□□□□ 0.61
SGCA-201ENST00000262018 ZNF526Q8TF50 670 aaPredicted RBP18.83■□□□□ 0.61
SGCA-201ENST00000262018 CABP1Q9NZU7 370 aa18.83■□□□□ 0.61
SGCA-201ENST00000262018 RGPD5Q99666 1765 aa18.82■□□□□ 0.6
SGCA-201ENST00000262018 TFCP2L1Q9NZI6 479 aa18.82■□□□□ 0.6
SGCA-201ENST00000262018 BTAF1O14981 1849 aa18.82■□□□□ 0.6
SGCA-201ENST00000262018 KCNH5Q8NCM2 988 aa18.8■□□□□ 0.6
SGCA-201ENST00000262018 GOLGB1Q14789 3259 aaKnown RBP18.79■□□□□ 0.6
SGCA-201ENST00000262018 PIK3C2AO00443 1686 aa18.79■□□□□ 0.6
SGCA-201ENST00000262018 SLC27A3Q5K4L6 730 aa18.79■□□□□ 0.6
SGCA-201ENST00000262018 COL24A1Q17RW2 1714 aa18.79■□□□□ 0.6
SGCA-201ENST00000262018 TRPM1Q7Z4N2 1603 aa18.79■□□□□ 0.6
SGCA-201ENST00000262018 KAT6BQ8WYB5 2073 aa18.79■□□□□ 0.6
SGCA-201ENST00000262018 ABCC6O95255 1503 aa18.78■□□□□ 0.6
SGCA-201ENST00000262018 TONSLQ96HA7 1378 aa18.78■□□□□ 0.6
SGCA-201ENST00000262018 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.6
SGCA-201ENST00000262018 KCNQ4P56696 695 aa18.77■□□□□ 0.6
SGCA-201ENST00000262018 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.6
SGCA-201ENST00000262018 MSH5O43196 834 aa18.76■□□□□ 0.59
SGCA-201ENST00000262018 NLRP2Q9NX02 1062 aa18.76■□□□□ 0.59
SGCA-201ENST00000262018 IL2RBP14784 551 aa18.75■□□□□ 0.59
SGCA-201ENST00000262018 CENPJQ9HC77 1338 aaPredicted RBP18.74■□□□□ 0.59
SGCA-201ENST00000262018 ADCY9O60503 1353 aa18.74■□□□□ 0.59
SGCA-201ENST00000262018 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
SGCA-201ENST00000262018 NBPF1Q3BBV0 1214 aa18.73■□□□□ 0.59
SGCA-201ENST00000262018 TUBGCP6Q96RT7 1819 aa18.72■□□□□ 0.59
SGCA-201ENST00000262018 MSL1Q68DK7 614 aa18.72■□□□□ 0.59
SGCA-201ENST00000262018 QRICH2Q9H0J4 1663 aa18.72■□□□□ 0.59
SGCA-201ENST00000262018 APLP1P51693 650 aa18.71■□□□□ 0.59
SGCA-201ENST00000262018 NFAT5O94916 1531 aa18.7■□□□□ 0.58
SGCA-201ENST00000262018 COL23A1Q86Y22 540 aaPredicted RBP18.7■□□□□ 0.58
SGCA-201ENST00000262018 DDX54Q8TDD1 881 aaKnown RBP18.7■□□□□ 0.58
SGCA-201ENST00000262018 SYTL4Q96C24 671 aaPredicted RBP18.7■□□□□ 0.58
SGCA-201ENST00000262018 ERBB3P21860 1342 aa18.69■□□□□ 0.58
SGCA-201ENST00000262018 KIF3CO14782 793 aa18.69■□□□□ 0.58
SGCA-201ENST00000262018 CAPN15O75808 1086 aa18.69■□□□□ 0.58
SGCA-201ENST00000262018 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
SGCA-201ENST00000262018 CD2APQ9Y5K6 639 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms