RNA–Protein interactions for RNA: ENST00000261884.7

TRIP4-201, Transcript of thyroid hormone receptor interactor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP4, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-201ENST00000261884 U2AF1Q01081 240 aaKnown RBP eCLIP24.95■■□□□ 1.58
TRIP4-201ENST00000261884 U2SURPO15042 1029 aaKnown RBP24.95■■□□□ 1.58
TRIP4-201ENST00000261884 RNF123Q5XPI4 1314 aa24.94■■□□□ 1.58
TRIP4-201ENST00000261884 IL13P35225 146 aa24.94■■□□□ 1.58
TRIP4-201ENST00000261884 HSP90AB2PQ58FF8 381 aa24.94■■□□□ 1.58
TRIP4-201ENST00000261884 CERKQ8TCT0 537 aa24.94■■□□□ 1.58
TRIP4-201ENST00000261884 UBAP1LF5GYI3 381 aa24.93■■□□□ 1.58
TRIP4-201ENST00000261884 B4GALNT3Q6L9W6 998 aa24.93■■□□□ 1.58
TRIP4-201ENST00000261884 PHRF1Q9P1Y6 1649 aaKnown RBP24.93■■□□□ 1.58
TRIP4-201ENST00000261884 HOXC9P31274 260 aa24.92■■□□□ 1.58
TRIP4-201ENST00000261884 LRRC59Q96AG4 307 aaKnown RBP24.92■■□□□ 1.58
TRIP4-201ENST00000261884 BCL11AQ9H165 835 aa24.92■■□□□ 1.58
TRIP4-201ENST00000261884 LTN1O94822 1766 aa24.92■■□□□ 1.58
TRIP4-201ENST00000261884 ARHGEF25Q86VW2 580 aa24.91■■□□□ 1.58
TRIP4-201ENST00000261884 EIF4A2Q14240 407 aaKnown RBP24.9■■□□□ 1.58
TRIP4-201ENST00000261884 IP6K1Q92551 441 aa24.9■■□□□ 1.58
TRIP4-201ENST00000261884 CRYBG1Q9Y4K1 1723 aa24.89■■□□□ 1.58
TRIP4-201ENST00000261884 PLEKHG5O94827 1062 aa24.89■■□□□ 1.57
TRIP4-201ENST00000261884 PNNQ9H307 717 aaKnown RBP24.89■■□□□ 1.57
TRIP4-201ENST00000261884 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
TRIP4-201ENST00000261884 FCHSD2O94868 740 aa24.87■■□□□ 1.57
TRIP4-201ENST00000261884 RUNDC1Q96C34 613 aa24.87■■□□□ 1.57
TRIP4-201ENST00000261884 CCDC146Q8IYE0 955 aa24.86■■□□□ 1.57
TRIP4-201ENST00000261884 CABLES1Q8TDN4 633 aa24.86■■□□□ 1.57
TRIP4-201ENST00000261884 CPDO75976 1380 aa24.85■■□□□ 1.57
TRIP4-201ENST00000261884 ZC3H6P61129 1189 aaKnown RBP24.84■■□□□ 1.57
TRIP4-201ENST00000261884 NGEFQ8N5V2 710 aa24.84■■□□□ 1.57
TRIP4-201ENST00000261884 ABCC6O95255 1503 aa24.83■■□□□ 1.57
TRIP4-201ENST00000261884 PHLPP1O60346 1717 aa24.83■■□□□ 1.57
TRIP4-201ENST00000261884 ZBTB7CA1YPR0 619 aa24.83■■□□□ 1.56
TRIP4-201ENST00000261884 COL16A1Q07092 1604 aaPredicted RBP24.82■■□□□ 1.56
TRIP4-201ENST00000261884 RGPD1P0DJD0 1748 aa24.81■■□□□ 1.56
TRIP4-201ENST00000261884 APAF1O14727 1248 aa24.81■■□□□ 1.56
TRIP4-201ENST00000261884 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
TRIP4-201ENST00000261884 PLEKHF1Q96S99 279 aa24.81■■□□□ 1.56
TRIP4-201ENST00000261884 RSPH6AQ9H0K4 717 aa24.81■■□□□ 1.56
TRIP4-201ENST00000261884 MAPK8IP3Q9UPT6 1336 aa24.8■■□□□ 1.56
TRIP4-201ENST00000261884 NEFMP07197 916 aa24.8■■□□□ 1.56
TRIP4-201ENST00000261884 KIAA0232Q92628 1395 aa24.8■■□□□ 1.56
TRIP4-201ENST00000261884 ABCA3Q99758 1704 aa24.8■■□□□ 1.56
TRIP4-201ENST00000261884 HMOX1P09601 288 aa24.79■■□□□ 1.56
TRIP4-201ENST00000261884 IGSF1Q8N6C5 1336 aa24.79■■□□□ 1.56
TRIP4-201ENST00000261884 COL22A1Q8NFW1 1626 aaPredicted RBP24.78■■□□□ 1.56
TRIP4-201ENST00000261884 PRKAR2BP31323 418 aa24.78■■□□□ 1.56
TRIP4-201ENST00000261884 ERICH6Q7L0X2 663 aa24.78■■□□□ 1.56
TRIP4-201ENST00000261884 SENP3-EIF4A1A0A087X0R7 540 aa24.78■■□□□ 1.56
TRIP4-201ENST00000261884 SULT6B1Q6IMI4 303 aa24.78■■□□□ 1.56
TRIP4-201ENST00000261884 TCP11L2Q8N4U5 519 aa24.78■■□□□ 1.56
TRIP4-201ENST00000261884 KDRP35968 1356 aa24.77■■□□□ 1.56
TRIP4-201ENST00000261884 NCBP3Q53F19 620 aaKnown RBP24.77■■□□□ 1.56
TRIP4-201ENST00000261884 EYA1Q99502 592 aa24.77■■□□□ 1.56
TRIP4-201ENST00000261884 LTV1Q96GA3 475 aaPredicted RBP24.76■■□□□ 1.55
TRIP4-201ENST00000261884 SALL2Q9Y467 1007 aaPredicted RBP24.76■■□□□ 1.55
TRIP4-201ENST00000261884 PRDM11Q9NQV5 511 aa24.76■■□□□ 1.55
TRIP4-201ENST00000261884 AXIN2Q9Y2T1 843 aa24.76■■□□□ 1.55
TRIP4-201ENST00000261884 ERBB3P21860 1342 aa24.74■■□□□ 1.55
TRIP4-201ENST00000261884 ANKRD24Q8TF21 1146 aa24.74■■□□□ 1.55
TRIP4-201ENST00000261884 COL18A1P39060 1754 aa24.73■■□□□ 1.55
TRIP4-201ENST00000261884 PDE3BQ13370 1112 aa24.73■■□□□ 1.55
TRIP4-201ENST00000261884 AEBP1Q8IUX7 1158 aa24.73■■□□□ 1.55
TRIP4-201ENST00000261884 CHRNA2Q15822 529 aa24.71■■□□□ 1.55
TRIP4-201ENST00000261884 ZNF521Q96K83 1311 aa24.71■■□□□ 1.55
TRIP4-201ENST00000261884 CCDC27Q2M243 656 aa24.71■■□□□ 1.55
TRIP4-201ENST00000261884 TMPOP42166 694 aaKnown RBP24.69■■□□□ 1.54
TRIP4-201ENST00000261884 PHF23Q9BUL5 403 aaPredicted RBP24.69■■□□□ 1.54
TRIP4-201ENST00000261884 NEUROD2Q15784 382 aa24.68■■□□□ 1.54
TRIP4-201ENST00000261884 NBPF6Q5VWK0 638 aa24.68■■□□□ 1.54
TRIP4-201ENST00000261884 PHACTR3Q96KR7 559 aa24.68■■□□□ 1.54
TRIP4-201ENST00000261884 NBPF4Q96M43 638 aa24.68■■□□□ 1.54
TRIP4-201ENST00000261884 RRP7AQ9Y3A4 280 aaKnown RBP24.68■■□□□ 1.54
TRIP4-201ENST00000261884 NCAPD2Q15021 1401 aa24.67■■□□□ 1.54
TRIP4-201ENST00000261884 LMO7Q8WWI1 1683 aa24.67■■□□□ 1.54
TRIP4-201ENST00000261884 RGPD5Q99666 1765 aa24.67■■□□□ 1.54
TRIP4-201ENST00000261884 WWC1Q8IX03 1113 aa24.66■■□□□ 1.54
TRIP4-201ENST00000261884 NFE2L2Q16236 605 aa24.66■■□□□ 1.54
TRIP4-201ENST00000261884 JCADQ9P266 1359 aa24.66■■□□□ 1.54
TRIP4-201ENST00000261884 FAM208AQ9UK61 1670 aaKnown RBP24.65■■□□□ 1.54
TRIP4-201ENST00000261884 CAMTA1Q9Y6Y1 1673 aa24.65■■□□□ 1.54
TRIP4-201ENST00000261884 RIPK4P57078 832 aa24.64■■□□□ 1.54
TRIP4-201ENST00000261884 CSB-PGBD3P0DP91 1061 aa24.64■■□□□ 1.53
TRIP4-201ENST00000261884 GOLGA2Q08379 1002 aa24.64■■□□□ 1.53
TRIP4-201ENST00000261884 CCDC136Q96JN2 1154 aa24.64■■□□□ 1.53
TRIP4-201ENST00000261884 FAM83GA6ND36 823 aa24.63■■□□□ 1.53
TRIP4-201ENST00000261884 COL5A2P05997 1499 aaPredicted RBP24.63■■□□□ 1.53
TRIP4-201ENST00000261884 USHBP1Q8N6Y0 703 aa24.62■■□□□ 1.53
TRIP4-201ENST00000261884 NOP58Q9Y2X3 529 aaKnown RBP24.62■■□□□ 1.53
TRIP4-201ENST00000261884 WDR17Q8IZU2 1322 aa24.61■■□□□ 1.53
TRIP4-201ENST00000261884 COL14A1Q05707 1796 aaKnown RBP24.61■■□□□ 1.53
TRIP4-201ENST00000261884 WDR63Q8IWG1 891 aa24.61■■□□□ 1.53
TRIP4-201ENST00000261884 NLRP2Q9NX02 1062 aa24.61■■□□□ 1.53
TRIP4-201ENST00000261884 LMOD3Q0VAK6 560 aa24.6■■□□□ 1.53
TRIP4-201ENST00000261884 RGPD2P0DJD1 1756 aa24.6■■□□□ 1.53
TRIP4-201ENST00000261884 GAS2L2Q8NHY3 880 aa24.59■■□□□ 1.53
TRIP4-201ENST00000261884 TRIM35Q9UPQ4 493 aa24.59■■□□□ 1.53
TRIP4-201ENST00000261884 CDCA7LQ96GN5 454 aa24.58■■□□□ 1.53
TRIP4-201ENST00000261884 E9PSI1 815 aa24.57■■□□□ 1.52
TRIP4-201ENST00000261884 PLEKHG2Q9H7P9 1386 aa24.57■■□□□ 1.52
TRIP4-201ENST00000261884 SPATA31A6Q5VVP1 1343 aa24.56■■□□□ 1.52
TRIP4-201ENST00000261884 BTG4Q9NY30 223 aa24.56■■□□□ 1.52
TRIP4-201ENST00000261884 HSPA1LP34931 641 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms