RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 CYP46A1Q9Y6A2 500 aa13.82□□□□□ -0.2
SORL1-201ENST00000260197 RAPGEF4Q8WZA2 1011 aa13.82□□□□□ -0.2
SORL1-201ENST00000260197 GOLGA6L7A0A1B0GV03 622 aa13.81□□□□□ -0.2
SORL1-201ENST00000260197 ERLIN1O75477 346 aa13.81□□□□□ -0.2
SORL1-201ENST00000260197 DACH1Q9UI36 760 aa13.81□□□□□ -0.2
SORL1-201ENST00000260197 CDK13Q14004 1512 aaKnown RBP13.81□□□□□ -0.2
SORL1-201ENST00000260197 TOPBP1Q92547 1522 aa13.81□□□□□ -0.2
SORL1-201ENST00000260197 SPC24Q8NBT2 197 aa13.81□□□□□ -0.2
SORL1-201ENST00000260197 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
SORL1-201ENST00000260197 PPFIBP1Q86W92 1011 aa13.81□□□□□ -0.2
SORL1-201ENST00000260197 CDKL5O76039 1030 aa13.81□□□□□ -0.2
SORL1-201ENST00000260197 PLEKHH1Q9ULM0 1364 aa13.81□□□□□ -0.2
SORL1-201ENST00000260197 K7ELQ4 463 aaPredicted RBP13.81□□□□□ -0.2
SORL1-201ENST00000260197 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
SORL1-201ENST00000260197 CCAR1Q8IX12 1150 aaKnown RBP13.81□□□□□ -0.2
SORL1-201ENST00000260197 IGF1RP08069 1367 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 CBFA2T2O43439 604 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 GNL3LQ9NVN8 582 aaKnown RBP13.8□□□□□ -0.2
SORL1-201ENST00000260197 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
SORL1-201ENST00000260197 ME1P48163 572 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 TSPYL1Q9H0U9 437 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 TRIM22Q8IYM9 498 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 KRT85P78386 507 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 CCDC112Q8NEF3 446 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
SORL1-201ENST00000260197 SYCP1Q15431 976 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 MAP3K1Q13233 1512 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 MTHFSP49914 203 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 GRPEL1Q9HAV7 217 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 LAMC3Q9Y6N6 1575 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 UQCRHLA0A096LP55 91 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 FYB1O15117 783 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 UQCRHP07919 91 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
SORL1-201ENST00000260197 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 NCAPD3P42695 1498 aa13.79□□□□□ -0.2
SORL1-201ENST00000260197 LRRCC1Q9C099 1032 aa13.78□□□□□ -0.2
SORL1-201ENST00000260197 SERPINC1P01008 464 aa13.78□□□□□ -0.2
SORL1-201ENST00000260197 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
SORL1-201ENST00000260197 ATF3P18847 181 aa13.78□□□□□ -0.2
SORL1-201ENST00000260197 KAT6AQ92794 2004 aa13.78□□□□□ -0.2
SORL1-201ENST00000260197 BCL11BQ9C0K0 894 aaPredicted RBP13.78□□□□□ -0.2
SORL1-201ENST00000260197 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.2
SORL1-201ENST00000260197 CFAP45Q9UL16 551 aa13.77□□□□□ -0.2
SORL1-201ENST00000260197 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.2
SORL1-201ENST00000260197 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.212e-6■■■■□ 24
SORL1-201ENST00000260197 MSH5O43196 834 aa13.77□□□□□ -0.21
SORL1-201ENST00000260197 INCENPQ9NQS7 918 aa13.77□□□□□ -0.21
SORL1-201ENST00000260197 TSPOAP1O95153 1857 aa13.77□□□□□ -0.21
SORL1-201ENST00000260197 CACNA1FO60840 1977 aa13.77□□□□□ -0.21
SORL1-201ENST00000260197 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
SORL1-201ENST00000260197 DNAJC2Q99543 621 aaKnown RBP13.76□□□□□ -0.21
SORL1-201ENST00000260197 WDR63Q8IWG1 891 aa13.76□□□□□ -0.21
SORL1-201ENST00000260197 CEP57L1Q8IYX8 460 aa13.76□□□□□ -0.21
SORL1-201ENST00000260197 KIF2AO00139 706 aaPredicted RBP13.76□□□□□ -0.21
SORL1-201ENST00000260197 KRT18P05783 430 aaKnown RBP13.76□□□□□ -0.21
SORL1-201ENST00000260197 MVPQ14764 893 aaKnown RBP13.76□□□□□ -0.21
SORL1-201ENST00000260197 PDZRN3Q9UPQ7 1066 aa13.76□□□□□ -0.21
SORL1-201ENST00000260197 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
SORL1-201ENST00000260197 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
SORL1-201ENST00000260197 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
SORL1-201ENST00000260197 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
SORL1-201ENST00000260197 TROQ12816 1431 aaPredicted RBP13.75□□□□□ -0.21
SORL1-201ENST00000260197 ENOX2Q16206 610 aaKnown RBP13.75□□□□□ -0.21
SORL1-201ENST00000260197 BRPF1P55201 1214 aaPredicted RBP13.75□□□□□ -0.21
SORL1-201ENST00000260197 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
SORL1-201ENST00000260197 PRKAR2BP31323 418 aa13.75□□□□□ -0.21
SORL1-201ENST00000260197 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
SORL1-201ENST00000260197 CEBPZQ03701 1054 aaKnown RBP13.75□□□□□ -0.21
SORL1-201ENST00000260197 C1orf115Q9H7X2 142 aa13.75□□□□□ -0.21
SORL1-201ENST00000260197 NLRP2Q9NX02 1062 aa13.75□□□□□ -0.21
SORL1-201ENST00000260197 MYH9P35579 1960 aaKnown RBP13.74□□□□□ -0.21
SORL1-201ENST00000260197 SEPT7Q16181 437 aaKnown RBP13.74□□□□□ -0.21
SORL1-201ENST00000260197 PKNOX2Q96KN3 472 aa13.74□□□□□ -0.21
SORL1-201ENST00000260197 MYH6P13533 1939 aa13.74□□□□□ -0.21
SORL1-201ENST00000260197 DEF6Q9H4E7 631 aa13.74□□□□□ -0.21
SORL1-201ENST00000260197 IKQ13123 557 aaPredicted RBP13.74□□□□□ -0.21
SORL1-201ENST00000260197 TWISTNBQ3B726 338 aaPredicted RBP13.74□□□□□ -0.21
SORL1-201ENST00000260197 BAZ2BQ9UIF8 2168 aaKnown RBP13.74□□□□□ -0.21
SORL1-201ENST00000260197 USP8P40818 1118 aa13.74□□□□□ -0.21
SORL1-201ENST00000260197 CCDC181Q5TID7 509 aa13.74□□□□□ -0.21
SORL1-201ENST00000260197 CHD1LQ86WJ1 897 aa13.73□□□□□ -0.21
SORL1-201ENST00000260197 GBP2P32456 591 aaPredicted RBP13.73□□□□□ -0.21
SORL1-201ENST00000260197 ABTB2Q8N961 1025 aa13.73□□□□□ -0.21
SORL1-201ENST00000260197 SPATA32Q96LK8 384 aa13.73□□□□□ -0.21
SORL1-201ENST00000260197 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
SORL1-201ENST00000260197 MYO9BQ13459 2157 aa13.73□□□□□ -0.21
SORL1-201ENST00000260197 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
SORL1-201ENST00000260197 EZRP15311 586 aaKnown RBP13.72□□□□□ -0.21
SORL1-201ENST00000260197 CENPHQ9H3R5 247 aa13.72□□□□□ -0.21
SORL1-201ENST00000260197 ANKRD30BQ9BXX2 1392 aa13.72□□□□□ -0.21
SORL1-201ENST00000260197 KRT32Q14532 448 aa13.72□□□□□ -0.21
SORL1-201ENST00000260197 CCDC69A6NI79 296 aa13.71□□□□□ -0.21
SORL1-201ENST00000260197 CCDC158Q5M9N0 1113 aa13.71□□□□□ -0.21
SORL1-201ENST00000260197 LARP1BQ659C4 914 aaKnown RBP13.71□□□□□ -0.21
SORL1-201ENST00000260197 GGNBP2Q9H3C7 697 aa13.71□□□□□ -0.21
SORL1-201ENST00000260197 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms