RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 RRS1Q15050 365 aaKnown RBP20.97■□□□□ 0.95
GYPC-201ENST00000259254 CFAP53Q96M91 514 aa20.97■□□□□ 0.95
GYPC-201ENST00000259254 USP19O94966 1318 aa20.97■□□□□ 0.95
GYPC-201ENST00000259254 CABLES1Q8TDN4 633 aa20.96■□□□□ 0.95
GYPC-201ENST00000259254 POLKQ9UBT6 870 aa20.96■□□□□ 0.95
GYPC-201ENST00000259254 EMILIN1Q9Y6C2 1016 aa20.96■□□□□ 0.95
GYPC-201ENST00000259254 GCP02774 474 aa20.95■□□□□ 0.94
GYPC-201ENST00000259254 MAP3K19Q56UN5 1328 aa20.93■□□□□ 0.94
GYPC-201ENST00000259254 SLIT3O75094 1523 aa20.93■□□□□ 0.94
GYPC-201ENST00000259254 AMPHP49418 695 aa20.92■□□□□ 0.94
GYPC-201ENST00000259254 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.942e-12■■■□□ 16.5
GYPC-201ENST00000259254 GLI3P10071 1580 aa20.92■□□□□ 0.94
GYPC-201ENST00000259254 USP54Q70EL1 1684 aa20.92■□□□□ 0.94
GYPC-201ENST00000259254 NRAPQ86VF7 1730 aa20.91■□□□□ 0.94
GYPC-201ENST00000259254 UNC5CLQ8IV45 518 aa20.91■□□□□ 0.94
GYPC-201ENST00000259254 PHRF1Q9P1Y6 1649 aaKnown RBP20.91■□□□□ 0.94
GYPC-201ENST00000259254 COL14A1Q05707 1796 aaKnown RBP20.9■□□□□ 0.94
GYPC-201ENST00000259254 ZC3H6P61129 1189 aaKnown RBP20.9■□□□□ 0.94
GYPC-201ENST00000259254 SMG6Q86US8 1419 aaKnown RBP20.89■□□□□ 0.94
GYPC-201ENST00000259254 GJD4Q96KN9 370 aaPredicted RBP20.89■□□□□ 0.93
GYPC-201ENST00000259254 NFAT5O94916 1531 aa20.88■□□□□ 0.93
GYPC-201ENST00000259254 WDR43Q15061 677 aaKnown RBP eCLIP20.88■□□□□ 0.93
GYPC-201ENST00000259254 FAM9BQ8IZU0 186 aa20.88■□□□□ 0.93
GYPC-201ENST00000259254 FLT4P35916 1363 aa20.86■□□□□ 0.93
GYPC-201ENST00000259254 ARHGEF25Q86VW2 580 aa20.86■□□□□ 0.93
GYPC-201ENST00000259254 DIAPH1O60610 1272 aaKnown RBP20.85■□□□□ 0.93
GYPC-201ENST00000259254 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
GYPC-201ENST00000259254 RTL1A6NKG5 1358 aa20.85■□□□□ 0.93
GYPC-201ENST00000259254 BRWD3Q6RI45 1802 aa20.84■□□□□ 0.93
GYPC-201ENST00000259254 HOXC9P31274 260 aa20.84■□□□□ 0.93
GYPC-201ENST00000259254 HSP90AB2PQ58FF8 381 aa20.84■□□□□ 0.93
GYPC-201ENST00000259254 PNISRQ8TF01 805 aaKnown RBP20.84■□□□□ 0.93
GYPC-201ENST00000259254 KIF24Q5T7B8 1368 aa20.84■□□□□ 0.93
GYPC-201ENST00000259254 KIAA0232Q92628 1395 aa20.84■□□□□ 0.93
GYPC-201ENST00000259254 FAM83GA6ND36 823 aa20.83■□□□□ 0.93
GYPC-201ENST00000259254 U2SURPO15042 1029 aaKnown RBP20.83■□□□□ 0.93
GYPC-201ENST00000259254 VPS72Q15906 364 aa20.83■□□□□ 0.93
GYPC-201ENST00000259254 PRDM11Q9NQV5 511 aa20.83■□□□□ 0.93
GYPC-201ENST00000259254 IP6K1Q92551 441 aa20.82■□□□□ 0.92
GYPC-201ENST00000259254 INSRP06213 1382 aa20.82■□□□□ 0.92
GYPC-201ENST00000259254 CHRNA2Q15822 529 aa20.81■□□□□ 0.92
GYPC-201ENST00000259254 LTV1Q96GA3 475 aaPredicted RBP20.81■□□□□ 0.92
GYPC-201ENST00000259254 CPDO75976 1380 aa20.81■□□□□ 0.92
GYPC-201ENST00000259254 COL3A1P02461 1466 aaPredicted RBP20.81■□□□□ 0.92
GYPC-201ENST00000259254 PEAK1Q9H792 1746 aa20.79■□□□□ 0.92
GYPC-201ENST00000259254 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
GYPC-201ENST00000259254 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.92
GYPC-201ENST00000259254 EIF4A2Q14240 407 aaKnown RBP20.79■□□□□ 0.92
GYPC-201ENST00000259254 IL13P35225 146 aa20.78■□□□□ 0.92
GYPC-201ENST00000259254 BTG4Q9NY30 223 aa20.78■□□□□ 0.92
GYPC-201ENST00000259254 YTHDC1Q96MU7 727 aaKnown RBP20.77■□□□□ 0.92
GYPC-201ENST00000259254 CCDC9Q9Y3X0 531 aaKnown RBP20.77■□□□□ 0.92
GYPC-201ENST00000259254 MAP2P11137 1827 aaKnown RBP20.76■□□□□ 0.91
GYPC-201ENST00000259254 ADAMTS8Q9UP79 889 aa20.76■□□□□ 0.91
GYPC-201ENST00000259254 BLMP54132 1417 aaPredicted RBP20.76■□□□□ 0.91
GYPC-201ENST00000259254 ANKRD24Q8TF21 1146 aa20.75■□□□□ 0.91
GYPC-201ENST00000259254 AXIN2Q9Y2T1 843 aa20.75■□□□□ 0.91
GYPC-201ENST00000259254 CSB-PGBD3P0DP91 1061 aa20.74■□□□□ 0.91
GYPC-201ENST00000259254 LTN1O94822 1766 aa20.73■□□□□ 0.91
GYPC-201ENST00000259254 ONECUT3O60422 494 aaPredicted RBP20.73■□□□□ 0.91
GYPC-201ENST00000259254 LMO7Q8WWI1 1683 aa20.73■□□□□ 0.91
GYPC-201ENST00000259254 SEPT12Q8IYM1 358 aa20.72■□□□□ 0.91
GYPC-201ENST00000259254 HMOX1P09601 288 aa20.71■□□□□ 0.91
GYPC-201ENST00000259254 ABCC6O95255 1503 aa20.71■□□□□ 0.91
GYPC-201ENST00000259254 EP400Q96L91 3159 aa20.71■□□□□ 0.91
GYPC-201ENST00000259254 THSD7AQ9UPZ6 1657 aa20.7■□□□□ 0.91
GYPC-201ENST00000259254 EVA1CP58658 441 aa20.7■□□□□ 0.9
GYPC-201ENST00000259254 CCDC146Q8IYE0 955 aa20.7■□□□□ 0.9
GYPC-201ENST00000259254 ERBB3P21860 1342 aa20.7■□□□□ 0.9
GYPC-201ENST00000259254 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
GYPC-201ENST00000259254 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
GYPC-201ENST00000259254 SULT6B1Q6IMI4 303 aa20.69■□□□□ 0.9
GYPC-201ENST00000259254 EYA1Q99502 592 aa20.69■□□□□ 0.9
GYPC-201ENST00000259254 STRN4Q9NRL3 753 aa20.69■□□□□ 0.9
GYPC-201ENST00000259254 PNNQ9H307 717 aaKnown RBP20.68■□□□□ 0.9
GYPC-201ENST00000259254 NLRP2Q9NX02 1062 aa20.68■□□□□ 0.9
GYPC-201ENST00000259254 CAMTA1Q9Y6Y1 1673 aa20.67■□□□□ 0.9
GYPC-201ENST00000259254 NEFMP07197 916 aa20.67■□□□□ 0.9
GYPC-201ENST00000259254 FAM98CQ17RN3 349 aaKnown RBP20.67■□□□□ 0.9
GYPC-201ENST00000259254 USHBP1Q8N6Y0 703 aa20.67■□□□□ 0.9
GYPC-201ENST00000259254 IGSF1Q8N6C5 1336 aa20.67■□□□□ 0.9
GYPC-201ENST00000259254 FCHSD2O94868 740 aa20.66■□□□□ 0.9
GYPC-201ENST00000259254 PRKAR2BP31323 418 aa20.66■□□□□ 0.9
GYPC-201ENST00000259254 HNRNPUQ00839 825 aaKnown RBP eCLIP20.66■□□□□ 0.9
GYPC-201ENST00000259254 NBPF6Q5VWK0 638 aa20.66■□□□□ 0.9
GYPC-201ENST00000259254 CCDC125Q86Z20 511 aa20.66■□□□□ 0.9
GYPC-201ENST00000259254 AEBP1Q8IUX7 1158 aa20.66■□□□□ 0.9
GYPC-201ENST00000259254 NBPF4Q96M43 638 aa20.66■□□□□ 0.9
GYPC-201ENST00000259254 MAPK8IP3Q9UPT6 1336 aa20.66■□□□□ 0.9
GYPC-201ENST00000259254 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
GYPC-201ENST00000259254 TOM1L2Q6ZVM7 507 aa20.65■□□□□ 0.9
GYPC-201ENST00000259254 KRT27Q7Z3Y8 459 aa20.65■□□□□ 0.9
GYPC-201ENST00000259254 RUNDC1Q96C34 613 aa20.65■□□□□ 0.9
GYPC-201ENST00000259254 COL5A2P05997 1499 aaPredicted RBP20.64■□□□□ 0.89
GYPC-201ENST00000259254 SPATA31A1Q5TZJ5 1347 aa20.64■□□□□ 0.89
GYPC-201ENST00000259254 WDR17Q8IZU2 1322 aa20.64■□□□□ 0.89
GYPC-201ENST00000259254 A0A0G2JS52 829 aa20.64■□□□□ 0.89
GYPC-201ENST00000259254 MYT1Q01538 1121 aa20.64■□□□□ 0.89
GYPC-201ENST00000259254 RSPH6AQ9H0K4 717 aa20.64■□□□□ 0.89
GYPC-201ENST00000259254 COL18A1P39060 1754 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms