RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 NBPF14Q5TI25 921 aa11.21□□□□□ -0.61
TRA2B-201ENST00000259043 DNMT3LQ9UJW3 386 aa11.2□□□□□ -0.62
TRA2B-201ENST00000259043 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
TRA2B-201ENST00000259043 VASH1Q7L8A9 365 aaPredicted RBP11.19□□□□□ -0.62
TRA2B-201ENST00000259043 TRMT44Q8IYL2 757 aaKnown RBP11.19□□□□□ -0.62
TRA2B-201ENST00000259043 TSEN34Q9BSV6 310 aaKnown RBP11.19□□□□□ -0.62
TRA2B-201ENST00000259043 EMILIN1Q9Y6C2 1016 aa11.19□□□□□ -0.62
TRA2B-201ENST00000259043 SH3BP5LQ7L8J4 393 aa11.18□□□□□ -0.62
TRA2B-201ENST00000259043 HELBQ8NG08 1087 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-201ENST00000259043 KCNMA1Q12791 1236 aa11.16□□□□□ -0.62
TRA2B-201ENST00000259043 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.16□□□□□ -0.621e-7■■■■■ 32.6
TRA2B-201ENST00000259043 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
TRA2B-201ENST00000259043 PCMTD1Q96MG8 357 aaPredicted RBP11.16□□□□□ -0.62
TRA2B-201ENST00000259043 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
TRA2B-201ENST00000259043 TTLL8A6PVC2 850 aa11.14□□□□□ -0.63
TRA2B-201ENST00000259043 RFC5P40937 340 aa11.14□□□□□ -0.63
TRA2B-201ENST00000259043 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.631e-18■■□□□ 12.2
TRA2B-201ENST00000259043 LOC100996750A0A140TA64 210 aa11.13□□□□□ -0.63
TRA2B-201ENST00000259043 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
TRA2B-201ENST00000259043 KRTAP4-6Q9BYQ5 205 aa11.13□□□□□ -0.63
TRA2B-201ENST00000259043 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-201ENST00000259043 CARD14Q9BXL6 1004 aa11.11□□□□□ -0.63
TRA2B-201ENST00000259043 AP1G2O75843 785 aa11.1□□□□□ -0.63
TRA2B-201ENST00000259043 GSK3AP49840 483 aa11.1□□□□□ -0.63
TRA2B-201ENST00000259043 KRT76Q01546 638 aa11.1□□□□□ -0.63
TRA2B-201ENST00000259043 PTSQ03393 145 aa11.1□□□□□ -0.63
TRA2B-201ENST00000259043 ERFEQ4G0M1 354 aa11.1□□□□□ -0.63
TRA2B-201ENST00000259043 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
TRA2B-201ENST00000259043 PGPEP1Q9NXJ5 209 aa11.1□□□□□ -0.63
TRA2B-201ENST00000259043 PPP1R26Q5T8A7 1209 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-201ENST00000259043 Q6ZVU0 165 aa11.08□□□□□ -0.64
TRA2B-201ENST00000259043 NANOS1Q8WY41 292 aaKnown RBP11.08□□□□□ -0.64
TRA2B-201ENST00000259043 CNTNAP3BQ96NU0 1288 aa11.08□□□□□ -0.64
TRA2B-201ENST00000259043 CNTNAP3Q9BZ76 1288 aa11.08□□□□□ -0.64
TRA2B-201ENST00000259043 FIGNL2A6NMB9 653 aa11.07□□□□□ -0.64
TRA2B-201ENST00000259043 SPINT1O43278 529 aa11.07□□□□□ -0.64
TRA2B-201ENST00000259043 USP17L8P0C7I0 530 aa11.07□□□□□ -0.64
TRA2B-201ENST00000259043 HMX1Q9NP08 348 aaPredicted RBP11.07□□□□□ -0.64
TRA2B-201ENST00000259043 CBLBQ13191 982 aa11.06□□□□□ -0.64
TRA2B-201ENST00000259043 PDXDC2PQ6P474 469 aa11.06□□□□□ -0.64
TRA2B-201ENST00000259043 KCTD17Q8N5Z5 321 aa11.06□□□□□ -0.64
TRA2B-201ENST00000259043 NR6A1Q15406 480 aa11.05□□□□□ -0.64
TRA2B-201ENST00000259043 TMEM259Q4ZIN3 620 aa11.05□□□□□ -0.64
TRA2B-201ENST00000259043 TMEM151AQ8N4L1 468 aa11.05□□□□□ -0.64
TRA2B-201ENST00000259043 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
TRA2B-201ENST00000259043 COL25A1Q9BXS0 654 aaPredicted RBP11.05□□□□□ -0.64
TRA2B-201ENST00000259043 CDV3Q9UKY7 258 aaKnown RBP11.05□□□□□ -0.64
TRA2B-201ENST00000259043 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-201ENST00000259043 SUZ12Q15022 739 aaKnown RBP11.04□□□□□ -0.64
TRA2B-201ENST00000259043 EPS8L1Q8TE68 723 aa11.04□□□□□ -0.64
TRA2B-201ENST00000259043 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
TRA2B-201ENST00000259043 ADAMTS8Q9UP79 889 aa11.04□□□□□ -0.64
TRA2B-201ENST00000259043 RASSF7Q02833 373 aa11.03□□□□□ -0.64
TRA2B-201ENST00000259043 DHX9Q08211 1270 aaKnown RBP11.03□□□□□ -0.64
TRA2B-201ENST00000259043 SLC10A4Q96EP9 437 aa11.03□□□□□ -0.64
TRA2B-201ENST00000259043 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
TRA2B-201ENST00000259043 GDF11O95390 407 aa11.02□□□□□ -0.65
TRA2B-201ENST00000259043 FKBPLQ9UIM3 349 aa11.02□□□□□ -0.65
TRA2B-201ENST00000259043 SLC35F4A4IF30 521 aa11.01□□□□□ -0.65
TRA2B-201ENST00000259043 ZBTB33Q86T24 672 aa11□□□□□ -0.65
TRA2B-201ENST00000259043 TRIM34Q9BYJ4 488 aa11□□□□□ -0.65
TRA2B-201ENST00000259043 RNFT1Q5M7Z0 435 aa10.99□□□□□ -0.65
TRA2B-201ENST00000259043 ZNF385CQ66K41 422 aaPredicted RBP10.99□□□□□ -0.65
TRA2B-201ENST00000259043 GJD4Q96KN9 370 aaPredicted RBP10.99□□□□□ -0.65
TRA2B-201ENST00000259043 ZC3H4Q9UPT8 1303 aaKnown RBP10.99□□□□□ -0.65
TRA2B-201ENST00000259043 ITGA6P23229 1130 aa10.98□□□□□ -0.65
TRA2B-201ENST00000259043 SVOPQ8N4V2 548 aa10.98□□□□□ -0.65
TRA2B-201ENST00000259043 SLURP2P0DP57 97 aa10.97□□□□□ -0.65
TRA2B-201ENST00000259043 BANK1Q8NDB2 785 aa10.97□□□□□ -0.65
TRA2B-201ENST00000259043 OCSTAMPQ9BR26 566 aa10.97□□□□□ -0.65
TRA2B-201ENST00000259043 CTSOP43234 321 aaPredicted RBP10.96□□□□□ -0.65
TRA2B-201ENST00000259043 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.65
TRA2B-201ENST00000259043 SV2AQ7L0J3 742 aa10.96□□□□□ -0.65
TRA2B-201ENST00000259043 VWA5B2Q8N398 1253 aa10.96□□□□□ -0.65
TRA2B-201ENST00000259043 AGBL1Q96MI9 1066 aa10.96□□□□□ -0.65
TRA2B-201ENST00000259043 RELBQ01201 579 aa10.95□□□□□ -0.66
TRA2B-201ENST00000259043 INSM2Q96T92 566 aaPredicted RBP10.95□□□□□ -0.66
TRA2B-201ENST00000259043 GPSM3Q9Y4H4 160 aa10.95□□□□□ -0.66
TRA2B-201ENST00000259043 CDC14CA4D256 554 aa10.94□□□□□ -0.66
TRA2B-201ENST00000259043 SOCS7O14512 581 aa10.94□□□□□ -0.66
TRA2B-201ENST00000259043 PTK2Q05397 1052 aa10.94□□□□□ -0.66
TRA2B-201ENST00000259043 POLMQ9NP87 494 aaPredicted RBP10.94□□□□□ -0.66
TRA2B-201ENST00000259043 MTMR14Q8NCE2 650 aa10.93□□□□□ -0.66
TRA2B-201ENST00000259043 ARHGEF15O94989 841 aa10.92□□□□□ -0.66
TRA2B-201ENST00000259043 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
TRA2B-201ENST00000259043 WHAMMQ8TF30 809 aa10.92□□□□□ -0.66
TRA2B-201ENST00000259043 SNRKQ9NRH2 765 aa10.92□□□□□ -0.66
TRA2B-201ENST00000259043 GPR37L1O60883 481 aa10.91□□□□□ -0.66
TRA2B-201ENST00000259043 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
TRA2B-201ENST00000259043 ZNF395Q9H8N7 513 aaPredicted RBP10.91□□□□□ -0.66
TRA2B-201ENST00000259043 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
TRA2B-201ENST00000259043 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
TRA2B-201ENST00000259043 TMPRSS4Q9NRS4 437 aa10.88□□□□□ -0.67
TRA2B-201ENST00000259043 DNMT3AQ9Y6K1 912 aaPredicted RBP10.88□□□□□ -0.67
TRA2B-201ENST00000259043 ADH1AP07327 375 aa10.87□□□□□ -0.67
TRA2B-201ENST00000259043 IRS1P35568 1242 aa10.87□□□□□ -0.67
TRA2B-201ENST00000259043 MARSP56192 900 aaKnown RBP10.87□□□□□ -0.67
TRA2B-201ENST00000259043 KANK3Q6NY19 840 aa10.87□□□□□ -0.67
TRA2B-201ENST00000259043 ZNF784Q8NCA9 323 aaPredicted RBP10.87□□□□□ -0.67
TRA2B-201ENST00000259043 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms