RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 NFAT5O94916 1531 aa24.89■■□□□ 1.57
SNRPA1-201ENST00000254193 COL5A2P05997 1499 aaPredicted RBP24.88■■□□□ 1.57
SNRPA1-201ENST00000254193 LMO7Q8WWI1 1683 aa24.88■■□□□ 1.57
SNRPA1-201ENST00000254193 NSD3Q9BZ95 1437 aa24.86■■□□□ 1.57
SNRPA1-201ENST00000254193 FBLN1P23142 703 aa24.85■■□□□ 1.57
SNRPA1-201ENST00000254193 TCP11L2Q8N4U5 519 aa24.84■■□□□ 1.57
SNRPA1-201ENST00000254193 TOM1L2Q6ZVM7 507 aa24.83■■□□□ 1.57
SNRPA1-201ENST00000254193 KRT27Q7Z3Y8 459 aa24.83■■□□□ 1.57
SNRPA1-201ENST00000254193 MYOM1P52179 1685 aa24.82■■□□□ 1.56
SNRPA1-201ENST00000254193 CSB-PGBD3P0DP91 1061 aa24.82■■□□□ 1.56
SNRPA1-201ENST00000254193 PANK3Q9H999 370 aa24.82■■□□□ 1.56
SNRPA1-201ENST00000254193 BARGINQ6ZT62 677 aa24.81■■□□□ 1.56
SNRPA1-201ENST00000254193 KIF7Q2M1P5 1343 aa24.81■■□□□ 1.56
SNRPA1-201ENST00000254193 WDR17Q8IZU2 1322 aa24.81■■□□□ 1.56
SNRPA1-201ENST00000254193 CRB1P82279 1406 aa24.8■■□□□ 1.56
SNRPA1-201ENST00000254193 USP54Q70EL1 1684 aa24.8■■□□□ 1.56
SNRPA1-201ENST00000254193 MAP3K19Q56UN5 1328 aa24.79■■□□□ 1.56
SNRPA1-201ENST00000254193 COL18A1P39060 1754 aa24.78■■□□□ 1.56
SNRPA1-201ENST00000254193 THRAP3Q9Y2W1 955 aaKnown RBP24.78■■□□□ 1.56
SNRPA1-201ENST00000254193 CGNL1Q0VF96 1302 aa24.78■■□□□ 1.56
SNRPA1-201ENST00000254193 RRS1Q15050 365 aaKnown RBP24.77■■□□□ 1.56
SNRPA1-201ENST00000254193 IP6K1Q92551 441 aa24.77■■□□□ 1.56
SNRPA1-201ENST00000254193 FAM182BQ5T319 152 aa24.76■■□□□ 1.55
SNRPA1-201ENST00000254193 AMPHP49418 695 aa24.75■■□□□ 1.55
SNRPA1-201ENST00000254193 ANKRD24Q8TF21 1146 aa24.75■■□□□ 1.55
SNRPA1-201ENST00000254193 CARD10Q9BWT7 1032 aa24.75■■□□□ 1.55
SNRPA1-201ENST00000254193 ERBB3P21860 1342 aa24.74■■□□□ 1.55
SNRPA1-201ENST00000254193 ABCC6O95255 1503 aa24.73■■□□□ 1.55
SNRPA1-201ENST00000254193 LTV1Q96GA3 475 aaPredicted RBP24.73■■□□□ 1.55
SNRPA1-201ENST00000254193 NLRP2Q9NX02 1062 aa24.73■■□□□ 1.55
SNRPA1-201ENST00000254193 HOXC9P31274 260 aa24.72■■□□□ 1.55
SNRPA1-201ENST00000254193 THSD7AQ9UPZ6 1657 aa24.72■■□□□ 1.55
SNRPA1-201ENST00000254193 PDE3BQ13370 1112 aa24.7■■□□□ 1.54
SNRPA1-201ENST00000254193 BLMP54132 1417 aaPredicted RBP24.69■■□□□ 1.54
SNRPA1-201ENST00000254193 WASHC2AQ641Q2 1341 aa24.69■■□□□ 1.54
SNRPA1-201ENST00000254193 CCDC7Q96M83 1385 aa24.68■■□□□ 1.54
SNRPA1-201ENST00000254193 CCDC125Q86Z20 511 aa24.67■■□□□ 1.54
SNRPA1-201ENST00000254193 KNSTRNQ9Y448 316 aa24.67■■□□□ 1.54
SNRPA1-201ENST00000254193 EMILIN1Q9Y6C2 1016 aa24.67■■□□□ 1.54
SNRPA1-201ENST00000254193 BRWD3Q6RI45 1802 aa24.67■■□□□ 1.54
SNRPA1-201ENST00000254193 TNNT2P45379 298 aaPredicted RBP24.66■■□□□ 1.54
SNRPA1-201ENST00000254193 DDB1Q16531 1140 aa24.65■■□□□ 1.54
SNRPA1-201ENST00000254193 CDCA7Q9BWT1 371 aaPredicted RBP24.65■■□□□ 1.54
SNRPA1-201ENST00000254193 RTL1A6NKG5 1358 aa24.65■■□□□ 1.54
SNRPA1-201ENST00000254193 PPM1GO15355 546 aaPredicted RBP24.64■■□□□ 1.54
SNRPA1-201ENST00000254193 HSP90AB2PQ58FF8 381 aa24.64■■□□□ 1.54
SNRPA1-201ENST00000254193 LTN1O94822 1766 aa24.63■■□□□ 1.53
SNRPA1-201ENST00000254193 FAM196AQ6ZSG2 479 aa24.63■■□□□ 1.53
SNRPA1-201ENST00000254193 RGPD5Q99666 1765 aa24.62■■□□□ 1.53
SNRPA1-201ENST00000254193 KIF20BQ96Q89 1820 aa24.62■■□□□ 1.53
SNRPA1-201ENST00000254193 DISP2A7MBM2 1401 aa24.61■■□□□ 1.53
SNRPA1-201ENST00000254193 POLKQ9UBT6 870 aa24.61■■□□□ 1.53
SNRPA1-201ENST00000254193 FLT4P35916 1363 aa24.61■■□□□ 1.53
SNRPA1-201ENST00000254193 NSD2O96028 1365 aa24.6■■□□□ 1.53
SNRPA1-201ENST00000254193 SF3B2Q13435 895 aaKnown RBP24.6■■□□□ 1.53
SNRPA1-201ENST00000254193 AMER1Q5JTC6 1135 aaPredicted RBP24.6■■□□□ 1.53
SNRPA1-201ENST00000254193 MORC1Q86VD1 984 aa24.6■■□□□ 1.53
SNRPA1-201ENST00000254193 INSRP06213 1382 aa24.59■■□□□ 1.53
SNRPA1-201ENST00000254193 KIF24Q5T7B8 1368 aa24.59■■□□□ 1.53
SNRPA1-201ENST00000254193 EXOC5O00471 708 aa24.59■■□□□ 1.53
SNRPA1-201ENST00000254193 PER1O15534 1290 aaPredicted RBP24.59■■□□□ 1.53
SNRPA1-201ENST00000254193 IL2RBP14784 551 aa24.59■■□□□ 1.53
SNRPA1-201ENST00000254193 NBPF6Q5VWK0 638 aa24.58■■□□□ 1.53
SNRPA1-201ENST00000254193 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
SNRPA1-201ENST00000254193 NBPF4Q96M43 638 aa24.58■■□□□ 1.53
SNRPA1-201ENST00000254193 TRIM37O94972 964 aa24.57■■□□□ 1.52
SNRPA1-201ENST00000254193 MARCH10Q8NA82 808 aaPredicted RBP24.57■■□□□ 1.52
SNRPA1-201ENST00000254193 EP400Q96L91 3159 aa24.56■■□□□ 1.52
SNRPA1-201ENST00000254193 USHBP1Q8N6Y0 703 aa24.55■■□□□ 1.52
SNRPA1-201ENST00000254193 SMG6Q86US8 1419 aaKnown RBP24.54■■□□□ 1.52
SNRPA1-201ENST00000254193 PEAK1Q9H792 1746 aa24.54■■□□□ 1.52
SNRPA1-201ENST00000254193 PARP4Q9UKK3 1724 aaKnown RBP24.53■■□□□ 1.52
SNRPA1-201ENST00000254193 CC2D1BQ5T0F9 858 aaKnown RBP24.53■■□□□ 1.52
SNRPA1-201ENST00000254193 LRRC37A3O60309 1634 aa24.52■■□□□ 1.52
SNRPA1-201ENST00000254193 OVOS2A0A0G2JMS6 1433 aa24.52■■□□□ 1.52
SNRPA1-201ENST00000254193 BAG6P46379 1132 aa24.51■■□□□ 1.51
SNRPA1-201ENST00000254193 CNGB1Q14028 1251 aaPredicted RBP24.51■■□□□ 1.51
SNRPA1-201ENST00000254193 TNS2Q63HR2 1409 aa24.5■■□□□ 1.51
SNRPA1-201ENST00000254193 EN1Q05925 392 aaPredicted RBP24.49■■□□□ 1.51
SNRPA1-201ENST00000254193 APBA3O96018 575 aa24.48■■□□□ 1.51
SNRPA1-201ENST00000254193 EIF4A2Q14240 407 aaKnown RBP24.46■■□□□ 1.51
SNRPA1-201ENST00000254193 PTF1AQ7RTS3 328 aa24.46■■□□□ 1.51
SNRPA1-201ENST00000254193 DDX54Q8TDD1 881 aaKnown RBP24.46■■□□□ 1.51
SNRPA1-201ENST00000254193 RAPGEF4Q8WZA2 1011 aa24.45■■□□□ 1.5
SNRPA1-201ENST00000254193 EYA1Q99502 592 aa24.45■■□□□ 1.5
SNRPA1-201ENST00000254193 MEGF6O75095 1541 aa24.45■■□□□ 1.5
SNRPA1-201ENST00000254193 ZCRB1Q8TBF4 217 aaKnown RBP24.44■■□□□ 1.5
SNRPA1-201ENST00000254193 WNK3Q9BYP7 1800 aa24.43■■□□□ 1.5
SNRPA1-201ENST00000254193 ANKRD26Q9UPS8 1709 aa24.43■■□□□ 1.5
SNRPA1-201ENST00000254193 BCL9O00512 1426 aa24.43■■□□□ 1.5
SNRPA1-201ENST00000254193 NPC1L1Q9UHC9 1359 aa24.42■■□□□ 1.5
SNRPA1-201ENST00000254193 TATP17735 454 aaPredicted RBP24.42■■□□□ 1.5
SNRPA1-201ENST00000254193 EZH2Q15910 746 aaKnown RBP24.42■■□□□ 1.5
SNRPA1-201ENST00000254193 BCL11BQ9C0K0 894 aaPredicted RBP24.42■■□□□ 1.5
SNRPA1-201ENST00000254193 FAM208AQ9UK61 1670 aaKnown RBP24.42■■□□□ 1.5
SNRPA1-201ENST00000254193 ZEB1P37275 1124 aaPredicted RBP24.41■■□□□ 1.5
SNRPA1-201ENST00000254193 ACSBG1Q96GR2 724 aa24.41■■□□□ 1.5
SNRPA1-201ENST00000254193 CAMKK2Q96RR4 588 aa24.41■■□□□ 1.5
SNRPA1-201ENST00000254193 KCNQ2O43526 872 aa24.4■■□□□ 1.5
SNRPA1-201ENST00000254193 MTHFSP49914 203 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms