RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 RGPD1P0DJD0 1748 aa17.77■□□□□ 0.44
VPREB3-201ENST00000248948 NSD3Q9BZ95 1437 aa17.76■□□□□ 0.43
VPREB3-201ENST00000248948 STRN4Q9NRL3 753 aa17.76■□□□□ 0.43
VPREB3-201ENST00000248948 BLMP54132 1417 aaPredicted RBP17.75■□□□□ 0.43
VPREB3-201ENST00000248948 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
VPREB3-201ENST00000248948 EVA1CP58658 441 aa17.74■□□□□ 0.43
VPREB3-201ENST00000248948 UPF1Q92900 1129 aaKnown RBP eCLIP17.74■□□□□ 0.43
VPREB3-201ENST00000248948 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
VPREB3-201ENST00000248948 TNS1Q9HBL0 1735 aaKnown RBP17.73■□□□□ 0.43
VPREB3-201ENST00000248948 FAM98CQ17RN3 349 aaKnown RBP17.73■□□□□ 0.43
VPREB3-201ENST00000248948 BARGINQ6ZT62 677 aa17.73■□□□□ 0.43
VPREB3-201ENST00000248948 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
VPREB3-201ENST00000248948 WDR17Q8IZU2 1322 aa17.72■□□□□ 0.43
VPREB3-201ENST00000248948 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
VPREB3-201ENST00000248948 ZBTB7CA1YPR0 619 aa17.72■□□□□ 0.43
VPREB3-201ENST00000248948 SOX12O15370 315 aa17.72■□□□□ 0.43
VPREB3-201ENST00000248948 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
VPREB3-201ENST00000248948 COG3Q96JB2 828 aa17.72■□□□□ 0.43
VPREB3-201ENST00000248948 A0A0G2JS52 829 aa17.7■□□□□ 0.42
VPREB3-201ENST00000248948 MYT1Q01538 1121 aa17.7■□□□□ 0.42
VPREB3-201ENST00000248948 KRT27Q7Z3Y8 459 aa17.7■□□□□ 0.42
VPREB3-201ENST00000248948 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
VPREB3-201ENST00000248948 PEAK1Q9H792 1746 aa17.69■□□□□ 0.42
VPREB3-201ENST00000248948 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
VPREB3-201ENST00000248948 ERBB3P21860 1342 aa17.69■□□□□ 0.42
VPREB3-201ENST00000248948 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
VPREB3-201ENST00000248948 FYB1O15117 783 aa17.68■□□□□ 0.42
VPREB3-201ENST00000248948 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
VPREB3-201ENST00000248948 KIF24Q5T7B8 1368 aa17.67■□□□□ 0.42
VPREB3-201ENST00000248948 DISP2A7MBM2 1401 aa17.67■□□□□ 0.42
VPREB3-201ENST00000248948 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
VPREB3-201ENST00000248948 CARD14Q9BXL6 1004 aa17.67■□□□□ 0.42
VPREB3-201ENST00000248948 CGNL1Q0VF96 1302 aa17.67■□□□□ 0.42
VPREB3-201ENST00000248948 NSD2O96028 1365 aa17.66■□□□□ 0.42
VPREB3-201ENST00000248948 SBF2Q86WG5 1849 aa17.66■□□□□ 0.42
VPREB3-201ENST00000248948 TOM1L2Q6ZVM7 507 aa17.66■□□□□ 0.42
VPREB3-201ENST00000248948 CCDC125Q86Z20 511 aa17.66■□□□□ 0.42
VPREB3-201ENST00000248948 GGNBP2Q9H3C7 697 aa17.66■□□□□ 0.42
VPREB3-201ENST00000248948 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
VPREB3-201ENST00000248948 POLR3GLQ9BT43 218 aa17.65■□□□□ 0.42
VPREB3-201ENST00000248948 MAP3K19Q56UN5 1328 aa17.65■□□□□ 0.42
VPREB3-201ENST00000248948 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
VPREB3-201ENST00000248948 KIF7Q2M1P5 1343 aa17.64■□□□□ 0.41
VPREB3-201ENST00000248948 TNS2Q63HR2 1409 aa17.64■□□□□ 0.41
VPREB3-201ENST00000248948 RGPD3A6NKT7 1758 aaPredicted RBP17.63■□□□□ 0.41
VPREB3-201ENST00000248948 RGPD4Q7Z3J3 1758 aa17.63■□□□□ 0.41
VPREB3-201ENST00000248948 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
VPREB3-201ENST00000248948 IP6K1Q92551 441 aa17.63■□□□□ 0.41
VPREB3-201ENST00000248948 CDCA7Q9BWT1 371 aaPredicted RBP17.63■□□□□ 0.41
VPREB3-201ENST00000248948 C11orf95C9JLR9 678 aaPredicted RBP17.62■□□□□ 0.41
VPREB3-201ENST00000248948 FLT4P35916 1363 aa17.62■□□□□ 0.41
VPREB3-201ENST00000248948 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
VPREB3-201ENST00000248948 SMG6Q86US8 1419 aaKnown RBP17.62■□□□□ 0.41
VPREB3-201ENST00000248948 SHANK3Q9BYB0 1731 aa17.61■□□□□ 0.41
VPREB3-201ENST00000248948 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
VPREB3-201ENST00000248948 HOXC9P31274 260 aa17.6■□□□□ 0.41
VPREB3-201ENST00000248948 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
VPREB3-201ENST00000248948 RREB1Q92766 1687 aa17.58■□□□□ 0.41
VPREB3-201ENST00000248948 BCL9O00512 1426 aa17.58■□□□□ 0.41
VPREB3-201ENST00000248948 INSRP06213 1382 aa17.58■□□□□ 0.4
VPREB3-201ENST00000248948 AMPHP49418 695 aa17.58■□□□□ 0.4
VPREB3-201ENST00000248948 PDE3BQ13370 1112 aa17.58■□□□□ 0.4
VPREB3-201ENST00000248948 PANK3Q9H999 370 aa17.58■□□□□ 0.4
VPREB3-201ENST00000248948 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
VPREB3-201ENST00000248948 DDB1Q16531 1140 aa17.56■□□□□ 0.4
VPREB3-201ENST00000248948 FAM196AQ6ZSG2 479 aa17.56■□□□□ 0.4
VPREB3-201ENST00000248948 PKD1L3Q7Z443 1732 aa17.55■□□□□ 0.4
VPREB3-201ENST00000248948 SF3B2Q13435 895 aaKnown RBP17.55■□□□□ 0.4
VPREB3-201ENST00000248948 NLRP2Q9NX02 1062 aa17.55■□□□□ 0.4
VPREB3-201ENST00000248948 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
VPREB3-201ENST00000248948 WASHC2AQ641Q2 1341 aa17.53■□□□□ 0.4
VPREB3-201ENST00000248948 NUP188Q5SRE5 1749 aa17.53■□□□□ 0.4
VPREB3-201ENST00000248948 IL2RBP14784 551 aa17.53■□□□□ 0.4
VPREB3-201ENST00000248948 FBLN1P23142 703 aa17.53■□□□□ 0.4
VPREB3-201ENST00000248948 FAM182BQ5T319 152 aa17.52■□□□□ 0.4
VPREB3-201ENST00000248948 KNSTRNQ9Y448 316 aa17.52■□□□□ 0.4
VPREB3-201ENST00000248948 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.39
VPREB3-201ENST00000248948 PARD3Q8TEW0 1356 aa17.52■□□□□ 0.39
VPREB3-201ENST00000248948 MEGF6O75095 1541 aa17.52■□□□□ 0.39
VPREB3-201ENST00000248948 BAG6P46379 1132 aa17.5■□□□□ 0.39
VPREB3-201ENST00000248948 LTV1Q96GA3 475 aaPredicted RBP17.5■□□□□ 0.39
VPREB3-201ENST00000248948 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
VPREB3-201ENST00000248948 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
VPREB3-201ENST00000248948 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
VPREB3-201ENST00000248948 BTAF1O14981 1849 aa17.49■□□□□ 0.39
VPREB3-201ENST00000248948 EXOC5O00471 708 aa17.48■□□□□ 0.39
VPREB3-201ENST00000248948 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
VPREB3-201ENST00000248948 PLEKHG2Q9H7P9 1386 aa17.48■□□□□ 0.39
VPREB3-201ENST00000248948 MARCH10Q8NA82 808 aaPredicted RBP17.47■□□□□ 0.39
VPREB3-201ENST00000248948 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
VPREB3-201ENST00000248948 TRIM37O94972 964 aa17.46■□□□□ 0.39
VPREB3-201ENST00000248948 DEFB132Q7Z7B7 95 aa17.46■□□□□ 0.39
VPREB3-201ENST00000248948 PER1O15534 1290 aaPredicted RBP17.45■□□□□ 0.38
VPREB3-201ENST00000248948 MORC1Q86VD1 984 aa17.45■□□□□ 0.38
VPREB3-201ENST00000248948 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
VPREB3-201ENST00000248948 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
VPREB3-201ENST00000248948 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
VPREB3-201ENST00000248948 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
VPREB3-201ENST00000248948 TOGARAM1Q9Y4F4 1720 aa17.42■□□□□ 0.38
VPREB3-201ENST00000248948 RAPGEF4Q8WZA2 1011 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms