RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
CDKN1A-201ENST00000244741 B4GALNT3Q6L9W6 998 aa22.4■■□□□ 1.18
CDKN1A-201ENST00000244741 ARHGEF25Q86VW2 580 aa22.4■■□□□ 1.18
CDKN1A-201ENST00000244741 RNF123Q5XPI4 1314 aa22.39■■□□□ 1.18
CDKN1A-201ENST00000244741 HOXC9P31274 260 aa22.39■■□□□ 1.18
CDKN1A-201ENST00000244741 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.18
CDKN1A-201ENST00000244741 ADAMTS8Q9UP79 889 aa22.39■■□□□ 1.18
CDKN1A-201ENST00000244741 LTN1O94822 1766 aa22.39■■□□□ 1.18
CDKN1A-201ENST00000244741 PHRF1Q9P1Y6 1649 aaKnown RBP22.39■■□□□ 1.17
CDKN1A-201ENST00000244741 NUTM2BA6NNL0 878 aaPredicted RBP22.39■■□□□ 1.17
CDKN1A-201ENST00000244741 NUTM2EB1AL46 878 aaPredicted RBP22.39■■□□□ 1.17
CDKN1A-201ENST00000244741 NUTM2AQ8IVF1 878 aaPredicted RBP22.39■■□□□ 1.17
CDKN1A-201ENST00000244741 KIAA0232Q92628 1395 aa22.38■■□□□ 1.17
CDKN1A-201ENST00000244741 DIAPH1O60610 1272 aaKnown RBP22.38■■□□□ 1.17
CDKN1A-201ENST00000244741 AXIN2Q9Y2T1 843 aa22.38■■□□□ 1.17
CDKN1A-201ENST00000244741 MYT1Q01538 1121 aa22.37■■□□□ 1.17
CDKN1A-201ENST00000244741 FLT4P35916 1363 aa22.37■■□□□ 1.17
CDKN1A-201ENST00000244741 COL3A1P02461 1466 aaPredicted RBP22.37■■□□□ 1.17
CDKN1A-201ENST00000244741 CDK12Q9NYV4 1490 aaPredicted RBP22.37■■□□□ 1.17
CDKN1A-201ENST00000244741 CRYBG1Q9Y4K1 1723 aa22.37■■□□□ 1.17
CDKN1A-201ENST00000244741 EIF4A2Q14240 407 aaKnown RBP22.36■■□□□ 1.17
CDKN1A-201ENST00000244741 ADAMTS2O95450 1211 aa22.35■■□□□ 1.17
CDKN1A-201ENST00000244741 U2AF1L5P0DN76 240 aaPredicted RBP22.35■■□□□ 1.17
CDKN1A-201ENST00000244741 U2AF1Q01081 240 aaKnown RBP eCLIP22.35■■□□□ 1.17
CDKN1A-201ENST00000244741 PRDM11Q9NQV5 511 aa22.35■■□□□ 1.17
CDKN1A-201ENST00000244741 IP6K1Q92551 441 aa22.35■■□□□ 1.17
CDKN1A-201ENST00000244741 IL13P35225 146 aa22.34■■□□□ 1.17
CDKN1A-201ENST00000244741 CCDC146Q8IYE0 955 aa22.34■■□□□ 1.17
CDKN1A-201ENST00000244741 SHPRHQ149N8 1683 aa22.33■■□□□ 1.17
CDKN1A-201ENST00000244741 ABCA3Q99758 1704 aa22.33■■□□□ 1.16
CDKN1A-201ENST00000244741 HMOX1P09601 288 aa22.32■■□□□ 1.16
CDKN1A-201ENST00000244741 FAM83GA6ND36 823 aa22.31■■□□□ 1.16
CDKN1A-201ENST00000244741 INSRP06213 1382 aa22.31■■□□□ 1.16
CDKN1A-201ENST00000244741 RGPD5Q99666 1765 aa22.29■■□□□ 1.16
CDKN1A-201ENST00000244741 USHBP1Q8N6Y0 703 aa22.29■■□□□ 1.16
CDKN1A-201ENST00000244741 SALL2Q9Y467 1007 aaPredicted RBP22.29■■□□□ 1.16
CDKN1A-201ENST00000244741 JCADQ9P266 1359 aa22.29■■□□□ 1.16
CDKN1A-201ENST00000244741 AEBP1Q8IUX7 1158 aa22.28■■□□□ 1.16
CDKN1A-201ENST00000244741 ANKRD24Q8TF21 1146 aa22.28■■□□□ 1.16
CDKN1A-201ENST00000244741 RTL1A6NKG5 1358 aa22.28■■□□□ 1.16
CDKN1A-201ENST00000244741 CPDO75976 1380 aa22.28■■□□□ 1.16
CDKN1A-201ENST00000244741 COL22A1Q8NFW1 1626 aaPredicted RBP22.28■■□□□ 1.16
CDKN1A-201ENST00000244741 KIF24Q5T7B8 1368 aa22.26■■□□□ 1.15
CDKN1A-201ENST00000244741 EYA1Q99502 592 aa22.26■■□□□ 1.15
CDKN1A-201ENST00000244741 SULT6B1Q6IMI4 303 aa22.25■■□□□ 1.15
CDKN1A-201ENST00000244741 STRN4Q9NRL3 753 aa22.25■■□□□ 1.15
CDKN1A-201ENST00000244741 CSB-PGBD3P0DP91 1061 aa22.24■■□□□ 1.15
CDKN1A-201ENST00000244741 NBPF6Q5VWK0 638 aa22.24■■□□□ 1.15
CDKN1A-201ENST00000244741 NBPF4Q96M43 638 aa22.24■■□□□ 1.15
CDKN1A-201ENST00000244741 COL18A1P39060 1754 aa22.24■■□□□ 1.15
CDKN1A-201ENST00000244741 BTG4Q9NY30 223 aa22.23■■□□□ 1.15
CDKN1A-201ENST00000244741 CAMTA1Q9Y6Y1 1673 aa22.23■■□□□ 1.15
CDKN1A-201ENST00000244741 ERBB3P21860 1342 aa22.23■■□□□ 1.15
CDKN1A-201ENST00000244741 ANP32EQ9BTT0 268 aa22.22■■□□□ 1.15
CDKN1A-201ENST00000244741 BLMP54132 1417 aaPredicted RBP22.21■■□□□ 1.15
CDKN1A-201ENST00000244741 RGPD2P0DJD1 1756 aa22.21■■□□□ 1.15
CDKN1A-201ENST00000244741 PRKAR2BP31323 418 aa22.21■■□□□ 1.15
CDKN1A-201ENST00000244741 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
CDKN1A-201ENST00000244741 NLRP2Q9NX02 1062 aa22.21■■□□□ 1.15
CDKN1A-201ENST00000244741 RSPH6AQ9H0K4 717 aa22.21■■□□□ 1.15
CDKN1A-201ENST00000244741 C8orf37Q96NL8 207 aa22.2■■□□□ 1.14
CDKN1A-201ENST00000244741 RRP7AQ9Y3A4 280 aaKnown RBP22.2■■□□□ 1.14
CDKN1A-201ENST00000244741 APAF1O14727 1248 aa22.19■■□□□ 1.14
CDKN1A-201ENST00000244741 EVA1CP58658 441 aa22.19■■□□□ 1.14
CDKN1A-201ENST00000244741 NEUROD2Q15784 382 aa22.19■■□□□ 1.14
CDKN1A-201ENST00000244741 CCDC136Q96JN2 1154 aa22.18■■□□□ 1.14
CDKN1A-201ENST00000244741 PHACTR3Q96KR7 559 aa22.18■■□□□ 1.14
CDKN1A-201ENST00000244741 IGSF1Q8N6C5 1336 aa22.18■■□□□ 1.14
CDKN1A-201ENST00000244741 LRP6O75581 1613 aa22.18■■□□□ 1.14
CDKN1A-201ENST00000244741 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
CDKN1A-201ENST00000244741 CDCA7LQ96GN5 454 aa22.18■■□□□ 1.14
CDKN1A-201ENST00000244741 PLEKHF1Q96S99 279 aa22.18■■□□□ 1.14
CDKN1A-201ENST00000244741 RCAN3Q9UKA8 241 aa22.18■■□□□ 1.14
CDKN1A-201ENST00000244741 FCHSD2O94868 740 aa22.17■■□□□ 1.14
CDKN1A-201ENST00000244741 RRP1P56182 461 aaKnown RBP22.17■■□□□ 1.14
CDKN1A-201ENST00000244741 USP35Q9P2H5 1018 aa22.17■■□□□ 1.14
CDKN1A-201ENST00000244741 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
CDKN1A-201ENST00000244741 FBXO41Q8TF61 875 aa22.16■■□□□ 1.14
CDKN1A-201ENST00000244741 RUNDC1Q96C34 613 aa22.16■■□□□ 1.14
CDKN1A-201ENST00000244741 LMO7Q8WWI1 1683 aa22.16■■□□□ 1.14
CDKN1A-201ENST00000244741 FANCIQ9NVI1 1328 aa22.16■■□□□ 1.14
CDKN1A-201ENST00000244741 COL5A2P05997 1499 aaPredicted RBP22.16■■□□□ 1.14
CDKN1A-201ENST00000244741 RGPD1P0DJD0 1748 aa22.16■■□□□ 1.14
CDKN1A-201ENST00000244741 SPATA31A6Q5VVP1 1343 aa22.16■■□□□ 1.14
CDKN1A-201ENST00000244741 NGLY1Q96IV0 654 aa22.15■■□□□ 1.14
CDKN1A-201ENST00000244741 MSH5O43196 834 aa22.15■■□□□ 1.14
CDKN1A-201ENST00000244741 MEX3CQ5U5Q3 659 aaKnown RBP22.15■■□□□ 1.14
CDKN1A-201ENST00000244741 TCP11L2Q8N4U5 519 aa22.15■■□□□ 1.14
CDKN1A-201ENST00000244741 MAPK8IP3Q9UPT6 1336 aa22.13■■□□□ 1.13
CDKN1A-201ENST00000244741 WDR17Q8IZU2 1322 aa22.13■■□□□ 1.13
CDKN1A-201ENST00000244741 COL14A1Q05707 1796 aaKnown RBP22.12■■□□□ 1.13
CDKN1A-201ENST00000244741 ABCC6O95255 1503 aa22.1■■□□□ 1.13
CDKN1A-201ENST00000244741 KDRP35968 1356 aa22.1■■□□□ 1.13
CDKN1A-201ENST00000244741 NEFMP07197 916 aa22.09■■□□□ 1.13
CDKN1A-201ENST00000244741 PLCH1Q4KWH8 1693 aa22.09■■□□□ 1.13
CDKN1A-201ENST00000244741 PNNQ9H307 717 aaKnown RBP22.09■■□□□ 1.13
CDKN1A-201ENST00000244741 EXOC6Q8TAG9 804 aa22.08■■□□□ 1.13
CDKN1A-201ENST00000244741 CCDC9Q9Y3X0 531 aaKnown RBP22.08■■□□□ 1.12
CDKN1A-201ENST00000244741 TMPOP42166 694 aaKnown RBP22.07■■□□□ 1.12
CDKN1A-201ENST00000244741 RIPK4P57078 832 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms