RNA–Protein interactions for RNA: ENST00000234142.9

GREB1-201, Transcript of growth regulating estrogen receptor binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GREB1, Length 8,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-201ENST00000234142 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
GREB1-201ENST00000234142 VPS36Q86VN1 386 aa13.93□□□□□ -0.18
GREB1-201ENST00000234142 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
GREB1-201ENST00000234142 USP47Q96K76 1375 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 ST20-MTHFSA0A0A6YYL1 179 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 CEP57L1Q8IYX8 460 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 TTC39AQ5SRH9 613 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 HOOK3Q86VS8 718 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 PKNOX2Q96KN3 472 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 CEP131Q9UPN4 1083 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 CYP46A1Q9Y6A2 500 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 SMC1AQ14683 1233 aaKnown RBP13.92□□□□□ -0.18
GREB1-201ENST00000234142 PRDM2Q13029 1718 aa13.92□□□□□ -0.18
GREB1-201ENST00000234142 APAF1O14727 1248 aa13.91□□□□□ -0.18
GREB1-201ENST00000234142 SSR1P43307 286 aaKnown RBP13.91□□□□□ -0.18
GREB1-201ENST00000234142 FIBPO43427 364 aa13.91□□□□□ -0.18
GREB1-201ENST00000234142 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
GREB1-201ENST00000234142 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
GREB1-201ENST00000234142 WASF1Q92558 559 aa13.91□□□□□ -0.18
GREB1-201ENST00000234142 NEK4P51957 841 aa13.91□□□□□ -0.18
GREB1-201ENST00000234142 ARHGAP29Q52LW3 1261 aa13.91□□□□□ -0.18
GREB1-201ENST00000234142 RRBP1Q9P2E9 1410 aaKnown RBP13.9□□□□□ -0.18
GREB1-201ENST00000234142 CCDC150Q8NCX0 1101 aa13.9□□□□□ -0.18
GREB1-201ENST00000234142 PRPF40AO75400 957 aaKnown RBP13.9□□□□□ -0.18
GREB1-201ENST00000234142 TNIP1Q15025 636 aa13.9□□□□□ -0.18
GREB1-201ENST00000234142 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
GREB1-201ENST00000234142 AIMP1Q12904 312 aaKnown RBP13.9□□□□□ -0.18
GREB1-201ENST00000234142 FGFR1OPO95684 399 aaKnown RBP13.89□□□□□ -0.19
GREB1-201ENST00000234142 ATF3P18847 181 aa13.89□□□□□ -0.19
GREB1-201ENST00000234142 UBXN4Q92575 508 aa13.89□□□□□ -0.19
GREB1-201ENST00000234142 SPA17Q15506 151 aa13.89□□□□□ -0.19
GREB1-201ENST00000234142 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
GREB1-201ENST00000234142 PPP4R3AQ6IN85 833 aa13.89□□□□□ -0.19
GREB1-201ENST00000234142 FAM177A1Q8N128 213 aaPredicted RBP13.89□□□□□ -0.19
GREB1-201ENST00000234142 CNNM1Q9NRU3 951 aa13.89□□□□□ -0.19
GREB1-201ENST00000234142 POLR3GO15318 223 aaPredicted RBP13.89□□□□□ -0.19
GREB1-201ENST00000234142 PPM1FP49593 454 aaPredicted RBP13.89□□□□□ -0.19
GREB1-201ENST00000234142 HNRNPMP52272 730 aaKnown RBP eCLIP13.88□□□□□ -0.195e-7■■□□□ 14.4
GREB1-201ENST00000234142 DNAJC2Q99543 621 aaKnown RBP13.88□□□□□ -0.19
GREB1-201ENST00000234142 FERP16591 822 aa13.88□□□□□ -0.19
GREB1-201ENST00000234142 CEBPZQ03701 1054 aaKnown RBP13.88□□□□□ -0.19
GREB1-201ENST00000234142 C6orf163Q5TEZ5 329 aa13.88□□□□□ -0.19
GREB1-201ENST00000234142 LUZP1Q86V48 1076 aa13.88□□□□□ -0.19
GREB1-201ENST00000234142 GSTTP1A0A1W2PQM5 241 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 ZSCAN12O43309 604 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 ZNF76P36508 570 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 IFFO1Q0D2I5 559 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■■□□ 17.1
GREB1-201ENST00000234142 V9GYY5 206 aaPredicted RBP13.87□□□□□ -0.19
GREB1-201ENST00000234142 UQCRHLA0A096LP55 91 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 UQCRHP07919 91 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 ZNF287Q9HBT7 754 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 GCC1Q96CN9 775 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 FERMT1Q9BQL6 677 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 SRCIN1Q9C0H9 1055 aa13.87□□□□□ -0.19
GREB1-201ENST00000234142 SURF6O75683 361 aaKnown RBP13.87□□□□□ -0.19
GREB1-201ENST00000234142 MINK1Q8N4C8 1332 aaPredicted RBP13.87□□□□□ -0.19
GREB1-201ENST00000234142 GNAI2P04899 355 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 DDX12PQ92771 950 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
GREB1-201ENST00000234142 HOMER2Q9NSB8 354 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 CCDC175P0C221 793 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 GAS2L2Q8NHY3 880 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 SREK1Q8WXA9 508 aaKnown RBP13.86□□□□□ -0.19
GREB1-201ENST00000234142 STAC3Q96MF2 364 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 UPF3BQ9BZI7 483 aaKnown RBP13.86□□□□□ -0.19
GREB1-201ENST00000234142 CCDC113Q9H0I3 377 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 PABPN1LA6NDY0 278 aaKnown RBP13.86□□□□□ -0.19
GREB1-201ENST00000234142 CCDC83Q8IWF9 413 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 CTNNA3Q9UI47 895 aa13.86□□□□□ -0.19
GREB1-201ENST00000234142 KIF5CO60282 957 aa13.85□□□□□ -0.19
GREB1-201ENST00000234142 KRT32Q14532 448 aa13.85□□□□□ -0.19
GREB1-201ENST00000234142 FKBP15Q5T1M5 1219 aa13.85□□□□□ -0.19
GREB1-201ENST00000234142 SPECC1LQ69YQ0 1117 aa13.85□□□□□ -0.19
GREB1-201ENST00000234142 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
GREB1-201ENST00000234142 TSG101Q99816 390 aa13.85□□□□□ -0.19
GREB1-201ENST00000234142 CALCOCO1Q9P1Z2 691 aa13.85□□□□□ -0.19
GREB1-201ENST00000234142 PHF23Q9BUL5 403 aaPredicted RBP13.85□□□□□ -0.19
GREB1-201ENST00000234142 KDM4AO75164 1064 aa13.84□□□□□ -0.19
GREB1-201ENST00000234142 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
GREB1-201ENST00000234142 WDHD1O75717 1129 aaPredicted RBP13.84□□□□□ -0.19
GREB1-201ENST00000234142 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
GREB1-201ENST00000234142 LARP1BQ659C4 914 aaKnown RBP13.84□□□□□ -0.19
GREB1-201ENST00000234142 SPATA32Q96LK8 384 aa13.84□□□□□ -0.19
GREB1-201ENST00000234142 CASQ1P31415 396 aa13.84□□□□□ -0.19
GREB1-201ENST00000234142 SSBP05455 408 aaKnown RBP eCLIP13.84□□□□□ -0.192e-7■■■□□ 14.6
GREB1-201ENST00000234142 COMMD10Q9Y6G5 202 aa13.84□□□□□ -0.19
GREB1-201ENST00000234142 ZWINTO95229 277 aa13.83□□□□□ -0.19
GREB1-201ENST00000234142 UBAC1Q9BSL1 405 aa13.83□□□□□ -0.19
GREB1-201ENST00000234142 TSNARE1Q96NA8 513 aa13.83□□□□□ -0.2
GREB1-201ENST00000234142 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.2
GREB1-201ENST00000234142 LARP1Q6PKG0 1096 aaKnown RBP13.83□□□□□ -0.2
GREB1-201ENST00000234142 BBXQ8WY36 941 aaPredicted RBP13.83□□□□□ -0.2
GREB1-201ENST00000234142 NUP62CLQ9H1M0 184 aa13.83□□□□□ -0.2
GREB1-201ENST00000234142 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
GREB1-201ENST00000234142 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
GREB1-201ENST00000234142 KIF18AQ8NI77 898 aa13.82□□□□□ -0.2
GREB1-201ENST00000234142 BCCIPQ9P287 314 aaKnown RBP eCLIP13.82□□□□□ -0.2
GREB1-201ENST00000234142 ERICH4A6NGS2 130 aa13.82□□□□□ -0.2
GREB1-201ENST00000234142 DHX37Q8IY37 1157 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms