RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.29□□□□□ -0.76
SPARC-201ENST00000231061 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
SPARC-201ENST00000231061 PDE6BP35913 854 aa10.29□□□□□ -0.76
SPARC-201ENST00000231061 MTA1Q13330 715 aa10.29□□□□□ -0.76
SPARC-201ENST00000231061 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
SPARC-201ENST00000231061 RAI14Q9P0K7 980 aa10.29□□□□□ -0.76
SPARC-201ENST00000231061 IQGAP3Q86VI3 1631 aa10.29□□□□□ -0.76
SPARC-201ENST00000231061 BLMP54132 1417 aaPredicted RBP10.29□□□□□ -0.76
SPARC-201ENST00000231061 SF3A1Q15459 793 aaKnown RBP10.29□□□□□ -0.76
SPARC-201ENST00000231061 TRAPPC8Q9Y2L5 1435 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 ERCC6L2Q5T890 1561 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 MYO5CQ9NQX4 1742 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 PPFIA4O75335 1185 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 CAPN2P17655 700 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 PLXNC1O60486 1568 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 CHD1O14646 1710 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 NAP1L1P55209 391 aaKnown RBP10.28□□□□□ -0.76
SPARC-201ENST00000231061 SIRT1Q96EB6 747 aa10.28□□□□□ -0.76
SPARC-201ENST00000231061 CCDC94Q9BW85 323 aaPredicted RBP10.28□□□□□ -0.76
SPARC-201ENST00000231061 PLCH2O75038 1416 aa10.27□□□□□ -0.77
SPARC-201ENST00000231061 BACH2Q9BYV9 841 aa10.27□□□□□ -0.77
SPARC-201ENST00000231061 MS4A1P11836 297 aa10.27□□□□□ -0.77
SPARC-201ENST00000231061 ZFYVE27Q5T4F4 411 aa10.26□□□□□ -0.77
SPARC-201ENST00000231061 PES1O00541 588 aaKnown RBP10.26□□□□□ -0.77
SPARC-201ENST00000231061 RAB11FIP3O75154 756 aa10.26□□□□□ -0.77
SPARC-201ENST00000231061 RBM5P52756 815 aaKnown RBP eCLIP10.26□□□□□ -0.77
SPARC-201ENST00000231061 GOLGA2Q08379 1002 aa10.26□□□□□ -0.77
SPARC-201ENST00000231061 ANKRD23Q86SG2 305 aa10.26□□□□□ -0.77
SPARC-201ENST00000231061 KDM4CQ9H3R0 1056 aa10.26□□□□□ -0.77
SPARC-201ENST00000231061 MAGI2Q86UL8 1455 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 KIF3BO15066 747 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 NRDCO43847 1150 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 MICALL1Q8N3F8 863 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 ANKRD62A6NC57 917 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.25□□□□□ -0.77
SPARC-201ENST00000231061 LAMC1P11047 1609 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 CHGAP10645 457 aaKnown RBP10.25□□□□□ -0.77
SPARC-201ENST00000231061 DNAJC21Q5F1R6 531 aaKnown RBP10.25□□□□□ -0.77
SPARC-201ENST00000231061 KANK1Q14678 1352 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 PLEKHH1Q9ULM0 1364 aa10.25□□□□□ -0.77
SPARC-201ENST00000231061 TDO2P48775 406 aa10.24□□□□□ -0.77
SPARC-201ENST00000231061 BIRC2Q13490 618 aa10.24□□□□□ -0.77
SPARC-201ENST00000231061 ZMYM4Q5VZL5 1548 aa10.24□□□□□ -0.77
SPARC-201ENST00000231061 CCDC172P0C7W6 258 aa10.24□□□□□ -0.77
SPARC-201ENST00000231061 ZKSCAN8Q15776 578 aaPredicted RBP10.24□□□□□ -0.77
SPARC-201ENST00000231061 MSL3Q8N5Y2 521 aaKnown RBP10.24□□□□□ -0.77
SPARC-201ENST00000231061 ATP10AO60312 1499 aa10.24□□□□□ -0.77
SPARC-201ENST00000231061 TNNT3P45378 269 aaPredicted RBP10.24□□□□□ -0.77
SPARC-201ENST00000231061 ZRSR2Q15696 482 aaKnown RBP10.24□□□□□ -0.77
SPARC-201ENST00000231061 SDR16C5Q8N3Y7 309 aa10.24□□□□□ -0.77
SPARC-201ENST00000231061 ZCRB1Q8TBF4 217 aaKnown RBP10.24□□□□□ -0.77
SPARC-201ENST00000231061 GTPBP4Q9BZE4 634 aaKnown RBP10.24□□□□□ -0.77
SPARC-201ENST00000231061 FRMD4BQ9Y2L6 1034 aa10.24□□□□□ -0.77
SPARC-201ENST00000231061 EIF3AQ14152 1382 aaKnown RBP10.24□□□□□ -0.77
SPARC-201ENST00000231061 SLC20A2Q08357 652 aa10.23□□□□□ -0.77
SPARC-201ENST00000231061 CXorf38Q8TB03 319 aa10.23□□□□□ -0.77
SPARC-201ENST00000231061 WDR7Q9Y4E6 1490 aa10.23□□□□□ -0.77
SPARC-201ENST00000231061 SCAF11Q99590 1463 aaKnown RBP10.23□□□□□ -0.77
SPARC-201ENST00000231061 SH3BP5O60239 455 aa10.23□□□□□ -0.77
SPARC-201ENST00000231061 DUSP27Q5VZP5 1158 aa10.23□□□□□ -0.77
SPARC-201ENST00000231061 CFAP70Q5T0N1 1121 aa10.23□□□□□ -0.77
SPARC-201ENST00000231061 DNAJC5Q9H3Z4 198 aa10.23□□□□□ -0.77
SPARC-201ENST00000231061 LMNB1P20700 586 aa10.22□□□□□ -0.77
SPARC-201ENST00000231061 ANKRD13AQ8IZ07 590 aa10.22□□□□□ -0.77
SPARC-201ENST00000231061 MYCBPQ99417 103 aaPredicted RBP10.22□□□□□ -0.77
SPARC-201ENST00000231061 KLHL42Q9P2K6 505 aa10.22□□□□□ -0.77
SPARC-201ENST00000231061 INSRP06213 1382 aa10.22□□□□□ -0.77
SPARC-201ENST00000231061 ABCC1P33527 1531 aa10.22□□□□□ -0.77
SPARC-201ENST00000231061 APAF1O14727 1248 aa10.22□□□□□ -0.77
SPARC-201ENST00000231061 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
SPARC-201ENST00000231061 UNCXA6NJT0 531 aa10.22□□□□□ -0.77
SPARC-201ENST00000231061 PAIP2Q9BPZ3 127 aaKnown RBP10.22□□□□□ -0.77
SPARC-201ENST00000231061 RPGRIP1LQ68CZ1 1315 aa10.21□□□□□ -0.78
SPARC-201ENST00000231061 MKRN3Q13064 507 aaKnown RBP10.2□□□□□ -0.78
SPARC-201ENST00000231061 CENPQQ7L2Z9 268 aaPredicted RBP10.2□□□□□ -0.78
SPARC-201ENST00000231061 ZCCHC11Q5TAX3 1644 aaKnown RBP10.2□□□□□ -0.78
SPARC-201ENST00000231061 MADDQ8WXG6 1647 aa10.2□□□□□ -0.78
SPARC-201ENST00000231061 RNF17Q9BXT8 1623 aaKnown RBP10.2□□□□□ -0.78
SPARC-201ENST00000231061 ASXL1Q8IXJ9 1541 aa10.2□□□□□ -0.78
SPARC-201ENST00000231061 RGL2O15211 777 aa10.2□□□□□ -0.78
SPARC-201ENST00000231061 NEXNQ0ZGT2 675 aa10.2□□□□□ -0.78
SPARC-201ENST00000231061 KIAA1211Q6ZU35 1233 aa10.2□□□□□ -0.78
SPARC-201ENST00000231061 TTC30BQ8N4P2 665 aa10.2□□□□□ -0.78
SPARC-201ENST00000231061 SHROOM2Q13796 1616 aa10.2□□□□□ -0.78
SPARC-201ENST00000231061 LONRF3Q496Y0 759 aa10.19□□□□□ -0.78
SPARC-201ENST00000231061 C1QTNF12Q5T7M4 302 aa10.19□□□□□ -0.78
SPARC-201ENST00000231061 NAT1P18440 290 aa10.19□□□□□ -0.78
SPARC-201ENST00000231061 SLFN5Q08AF3 891 aa10.19□□□□□ -0.78
SPARC-201ENST00000231061 SCAPERQ9BY12 1400 aa10.19□□□□□ -0.78
SPARC-201ENST00000231061 TRPM2O94759 1503 aa10.19□□□□□ -0.78
SPARC-201ENST00000231061 ADGRF5Q8IZF2 1346 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 SLC4A3P48751 1232 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 ZC3H12AQ5D1E8 599 aaKnown RBP10.18□□□□□ -0.78
SPARC-201ENST00000231061 SMC4Q9NTJ3 1288 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 GABBR1Q9UBS5 961 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms