RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 COL5A2P05997 1499 aaPredicted RBP20.13■□□□□ 0.81
PCOLCE-201ENST00000223061 MAP3K19Q56UN5 1328 aa20.13■□□□□ 0.81
PCOLCE-201ENST00000223061 RRS1Q15050 365 aaKnown RBP20.13■□□□□ 0.81
PCOLCE-201ENST00000223061 SPATA31A5Q5VU36 1347 aa20.11■□□□□ 0.81
PCOLCE-201ENST00000223061 SPATA31A7Q8IWB4 1347 aa20.11■□□□□ 0.81
PCOLCE-201ENST00000223061 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
PCOLCE-201ENST00000223061 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
PCOLCE-201ENST00000223061 RGS12O14924 1447 aa20.11■□□□□ 0.81
PCOLCE-201ENST00000223061 GLI3P10071 1580 aa20.11■□□□□ 0.81
PCOLCE-201ENST00000223061 AMPHP49418 695 aa20.1■□□□□ 0.81
PCOLCE-201ENST00000223061 COL18A1P39060 1754 aa20.1■□□□□ 0.81
PCOLCE-201ENST00000223061 PER1O15534 1290 aaPredicted RBP20.1■□□□□ 0.81
PCOLCE-201ENST00000223061 CSB-PGBD3P0DP91 1061 aa20.1■□□□□ 0.81
PCOLCE-201ENST00000223061 NSD2O96028 1365 aa20.1■□□□□ 0.81
PCOLCE-201ENST00000223061 CDK12Q9NYV4 1490 aaPredicted RBP20.09■□□□□ 0.81
PCOLCE-201ENST00000223061 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
PCOLCE-201ENST00000223061 AMER1Q5JTC6 1135 aaPredicted RBP20.09■□□□□ 0.81
PCOLCE-201ENST00000223061 SPATA31A1Q5TZJ5 1347 aa20.09■□□□□ 0.81
PCOLCE-201ENST00000223061 FAM98CQ17RN3 349 aaKnown RBP20.08■□□□□ 0.81
PCOLCE-201ENST00000223061 TOM1L2Q6ZVM7 507 aa20.08■□□□□ 0.81
PCOLCE-201ENST00000223061 IP6K1Q92551 441 aa20.08■□□□□ 0.81
PCOLCE-201ENST00000223061 LTN1O94822 1766 aa20.08■□□□□ 0.8
PCOLCE-201ENST00000223061 ABCC6O95255 1503 aa20.08■□□□□ 0.8
PCOLCE-201ENST00000223061 A0A0G2JS52 829 aa20.07■□□□□ 0.8
PCOLCE-201ENST00000223061 MYT1Q01538 1121 aa20.07■□□□□ 0.8
PCOLCE-201ENST00000223061 MORC1Q86VD1 984 aa20.07■□□□□ 0.8
PCOLCE-201ENST00000223061 WDR17Q8IZU2 1322 aa20.07■□□□□ 0.8
PCOLCE-201ENST00000223061 HOXC9P31274 260 aa20.07■□□□□ 0.8
PCOLCE-201ENST00000223061 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
PCOLCE-201ENST00000223061 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
PCOLCE-201ENST00000223061 ANKRD24Q8TF21 1146 aa20.06■□□□□ 0.8
PCOLCE-201ENST00000223061 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
PCOLCE-201ENST00000223061 CRB1P82279 1406 aa20.06■□□□□ 0.8
PCOLCE-201ENST00000223061 PPM1GO15355 546 aaPredicted RBP20.05■□□□□ 0.8
PCOLCE-201ENST00000223061 SEPT12Q8IYM1 358 aa20.05■□□□□ 0.8
PCOLCE-201ENST00000223061 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
PCOLCE-201ENST00000223061 ERBB3P21860 1342 aa20.04■□□□□ 0.8
PCOLCE-201ENST00000223061 RTL1A6NKG5 1358 aa20.04■□□□□ 0.8
PCOLCE-201ENST00000223061 TCP11L2Q8N4U5 519 aa20.04■□□□□ 0.8
PCOLCE-201ENST00000223061 ANKRD26Q9UPS8 1709 aa20.03■□□□□ 0.8
PCOLCE-201ENST00000223061 RGPD5Q99666 1765 aa20.03■□□□□ 0.8
PCOLCE-201ENST00000223061 ONECUT3O60422 494 aaPredicted RBP20.02■□□□□ 0.8
PCOLCE-201ENST00000223061 NLRP2Q9NX02 1062 aa20.02■□□□□ 0.8
PCOLCE-201ENST00000223061 POLKQ9UBT6 870 aa20.02■□□□□ 0.8
PCOLCE-201ENST00000223061 HSP90AB2PQ58FF8 381 aa20.02■□□□□ 0.79
PCOLCE-201ENST00000223061 FLT4P35916 1363 aa20.01■□□□□ 0.79
PCOLCE-201ENST00000223061 CARD10Q9BWT7 1032 aa20.01■□□□□ 0.79
PCOLCE-201ENST00000223061 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
PCOLCE-201ENST00000223061 BARGINQ6ZT62 677 aa20■□□□□ 0.79
PCOLCE-201ENST00000223061 THRAP3Q9Y2W1 955 aaKnown RBP20■□□□□ 0.79
PCOLCE-201ENST00000223061 PEAK1Q9H792 1746 aa20■□□□□ 0.79
PCOLCE-201ENST00000223061 KIF24Q5T7B8 1368 aa19.99■□□□□ 0.79
PCOLCE-201ENST00000223061 INSRP06213 1382 aa19.99■□□□□ 0.79
PCOLCE-201ENST00000223061 NPC1L1Q9UHC9 1359 aa19.99■□□□□ 0.79
PCOLCE-201ENST00000223061 SOCS7O14512 581 aa19.97■□□□□ 0.79
PCOLCE-201ENST00000223061 SMG6Q86US8 1419 aaKnown RBP19.97■□□□□ 0.79
PCOLCE-201ENST00000223061 THSD7AQ9UPZ6 1657 aa19.95■□□□□ 0.78
PCOLCE-201ENST00000223061 KRT27Q7Z3Y8 459 aa19.95■□□□□ 0.78
PCOLCE-201ENST00000223061 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
PCOLCE-201ENST00000223061 NBPF6Q5VWK0 638 aa19.93■□□□□ 0.78
PCOLCE-201ENST00000223061 USHBP1Q8N6Y0 703 aa19.93■□□□□ 0.78
PCOLCE-201ENST00000223061 NBPF4Q96M43 638 aa19.93■□□□□ 0.78
PCOLCE-201ENST00000223061 MAP2P11137 1827 aaKnown RBP19.92■□□□□ 0.78
PCOLCE-201ENST00000223061 MTHFSP49914 203 aa19.91■□□□□ 0.78
PCOLCE-201ENST00000223061 FAM182BQ5T319 152 aa19.91■□□□□ 0.78
PCOLCE-201ENST00000223061 CDCA7Q9BWT1 371 aaPredicted RBP19.91■□□□□ 0.78
PCOLCE-201ENST00000223061 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
PCOLCE-201ENST00000223061 DISP2A7MBM2 1401 aa19.9■□□□□ 0.78
PCOLCE-201ENST00000223061 IL2RBP14784 551 aa19.9■□□□□ 0.78
PCOLCE-201ENST00000223061 EIF4A2Q14240 407 aaKnown RBP19.9■□□□□ 0.78
PCOLCE-201ENST00000223061 DDB1Q16531 1140 aa19.9■□□□□ 0.78
PCOLCE-201ENST00000223061 BRWD3Q6RI45 1802 aa19.9■□□□□ 0.78
PCOLCE-201ENST00000223061 FAM208AQ9UK61 1670 aaKnown RBP19.89■□□□□ 0.77
PCOLCE-201ENST00000223061 EXOC5O00471 708 aa19.86■□□□□ 0.77
PCOLCE-201ENST00000223061 UPF1Q92900 1129 aaKnown RBP eCLIP19.86■□□□□ 0.77
PCOLCE-201ENST00000223061 EYA1Q99502 592 aa19.86■□□□□ 0.77
PCOLCE-201ENST00000223061 PARP4Q9UKK3 1724 aaKnown RBP19.86■□□□□ 0.77
PCOLCE-201ENST00000223061 RGPD2P0DJD1 1756 aa19.85■□□□□ 0.77
PCOLCE-201ENST00000223061 LRRC37A3O60309 1634 aa19.85■□□□□ 0.77
PCOLCE-201ENST00000223061 WNK3Q9BYP7 1800 aa19.85■□□□□ 0.77
PCOLCE-201ENST00000223061 EP400Q96L91 3159 aa19.85■□□□□ 0.77
PCOLCE-201ENST00000223061 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
PCOLCE-201ENST00000223061 RAPGEF4Q8WZA2 1011 aa19.84■□□□□ 0.77
PCOLCE-201ENST00000223061 MEGF6O75095 1541 aa19.83■□□□□ 0.77
PCOLCE-201ENST00000223061 TNS2Q63HR2 1409 aa19.83■□□□□ 0.76
PCOLCE-201ENST00000223061 PARD3Q8TEW0 1356 aa19.82■□□□□ 0.76
PCOLCE-201ENST00000223061 IL13P35225 146 aa19.82■□□□□ 0.76
PCOLCE-201ENST00000223061 MARCH10Q8NA82 808 aaPredicted RBP19.82■□□□□ 0.76
PCOLCE-201ENST00000223061 TATP17735 454 aaPredicted RBP19.81■□□□□ 0.76
PCOLCE-201ENST00000223061 FAM196AQ6ZSG2 479 aa19.81■□□□□ 0.76
PCOLCE-201ENST00000223061 IGSF1Q8N6C5 1336 aa19.8■□□□□ 0.76
PCOLCE-201ENST00000223061 DIAPH1O60610 1272 aaKnown RBP19.79■□□□□ 0.76
PCOLCE-201ENST00000223061 DDX54Q8TDD1 881 aaKnown RBP19.79■□□□□ 0.76
PCOLCE-201ENST00000223061 OVOS2A0A0G2JMS6 1433 aa19.79■□□□□ 0.76
PCOLCE-201ENST00000223061 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
PCOLCE-201ENST00000223061 ZCRB1Q8TBF4 217 aaKnown RBP19.79■□□□□ 0.76
PCOLCE-201ENST00000223061 CFAP53Q96M91 514 aa19.79■□□□□ 0.76
PCOLCE-201ENST00000223061 RALBP1Q15311 655 aa19.77■□□□□ 0.76
PCOLCE-201ENST00000223061 AEBP1Q8IUX7 1158 aa19.77■□□□□ 0.76
PCOLCE-201ENST00000223061 TRIM37O94972 964 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms