RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 ARHGEF25Q86VW2 580 aa13.3□□□□□ -0.28
RTCB-201ENST00000216038 NUTM2AQ8IVF1 878 aaPredicted RBP13.3□□□□□ -0.28
RTCB-201ENST00000216038 KIAA0232Q92628 1395 aa13.3□□□□□ -0.28
RTCB-201ENST00000216038 HOXC9P31274 260 aa13.3□□□□□ -0.28
RTCB-201ENST00000216038 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
RTCB-201ENST00000216038 RGPD5Q99666 1765 aa13.3□□□□□ -0.28
RTCB-201ENST00000216038 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
RTCB-201ENST00000216038 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
RTCB-201ENST00000216038 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
RTCB-201ENST00000216038 FLT4P35916 1363 aa13.29□□□□□ -0.28
RTCB-201ENST00000216038 SHPRHQ149N8 1683 aa13.29□□□□□ -0.28
RTCB-201ENST00000216038 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
RTCB-201ENST00000216038 U2SURPO15042 1029 aaKnown RBP13.29□□□□□ -0.28
RTCB-201ENST00000216038 DIAPH1O60610 1272 aaKnown RBP13.29□□□□□ -0.28
RTCB-201ENST00000216038 WDR43Q15061 677 aaKnown RBP eCLIP13.29□□□□□ -0.28
RTCB-201ENST00000216038 ADAMTS8Q9UP79 889 aa13.28□□□□□ -0.28
RTCB-201ENST00000216038 ADAMTS2O95450 1211 aa13.27□□□□□ -0.28
RTCB-201ENST00000216038 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.28
RTCB-201ENST00000216038 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.28
RTCB-201ENST00000216038 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
RTCB-201ENST00000216038 IP6K1Q92551 441 aa13.27□□□□□ -0.29
RTCB-201ENST00000216038 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
RTCB-201ENST00000216038 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
RTCB-201ENST00000216038 FAM83GA6ND36 823 aa13.25□□□□□ -0.29
RTCB-201ENST00000216038 IL13P35225 146 aa13.25□□□□□ -0.29
RTCB-201ENST00000216038 JCADQ9P266 1359 aa13.25□□□□□ -0.29
RTCB-201ENST00000216038 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
RTCB-201ENST00000216038 INSRP06213 1382 aa13.25□□□□□ -0.29
RTCB-201ENST00000216038 RTL1A6NKG5 1358 aa13.24□□□□□ -0.29
RTCB-201ENST00000216038 CPDO75976 1380 aa13.24□□□□□ -0.29
RTCB-201ENST00000216038 HMOX1P09601 288 aa13.24□□□□□ -0.29
RTCB-201ENST00000216038 NUDCQ9Y266 331 aa13.24□□□□□ -0.29
RTCB-201ENST00000216038 RGPD2P0DJD1 1756 aa13.24□□□□□ -0.29
RTCB-201ENST00000216038 COL18A1P39060 1754 aa13.24□□□□□ -0.29
RTCB-201ENST00000216038 KIF24Q5T7B8 1368 aa13.23□□□□□ -0.29
RTCB-201ENST00000216038 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
RTCB-201ENST00000216038 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
RTCB-201ENST00000216038 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
RTCB-201ENST00000216038 EYA1Q99502 592 aa13.22□□□□□ -0.29
RTCB-201ENST00000216038 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.29
RTCB-201ENST00000216038 STRN4Q9NRL3 753 aa13.21□□□□□ -0.29
RTCB-201ENST00000216038 BTG4Q9NY30 223 aa13.21□□□□□ -0.29
RTCB-201ENST00000216038 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.3
RTCB-201ENST00000216038 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
RTCB-201ENST00000216038 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
RTCB-201ENST00000216038 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
RTCB-201ENST00000216038 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
RTCB-201ENST00000216038 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
RTCB-201ENST00000216038 ERBB3P21860 1342 aa13.2□□□□□ -0.3
RTCB-201ENST00000216038 HNRNPUQ00839 825 aaKnown RBP eCLIP13.2□□□□□ -0.3
RTCB-201ENST00000216038 LMO7Q8WWI1 1683 aa13.19□□□□□ -0.3
RTCB-201ENST00000216038 FBXO41Q8TF61 875 aa13.19□□□□□ -0.3
RTCB-201ENST00000216038 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
RTCB-201ENST00000216038 NLRP2Q9NX02 1062 aa13.19□□□□□ -0.3
RTCB-201ENST00000216038 LRP6O75581 1613 aa13.19□□□□□ -0.3
RTCB-201ENST00000216038 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
RTCB-201ENST00000216038 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
RTCB-201ENST00000216038 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
RTCB-201ENST00000216038 EVA1CP58658 441 aa13.18□□□□□ -0.3
RTCB-201ENST00000216038 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
RTCB-201ENST00000216038 SPATA31A6Q5VVP1 1343 aa13.18□□□□□ -0.3
RTCB-201ENST00000216038 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
RTCB-201ENST00000216038 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
RTCB-201ENST00000216038 IGSF1Q8N6C5 1336 aa13.17□□□□□ -0.3
RTCB-201ENST00000216038 COL5A2P05997 1499 aaPredicted RBP13.17□□□□□ -0.3
RTCB-201ENST00000216038 PLCH1Q4KWH8 1693 aa13.17□□□□□ -0.3
RTCB-201ENST00000216038 APAF1O14727 1248 aa13.17□□□□□ -0.3
RTCB-201ENST00000216038 NEUROD2Q15784 382 aa13.17□□□□□ -0.3
RTCB-201ENST00000216038 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
RTCB-201ENST00000216038 NGLY1Q96IV0 654 aa13.17□□□□□ -0.3
RTCB-201ENST00000216038 FCHSD2O94868 740 aa13.16□□□□□ -0.3
RTCB-201ENST00000216038 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
RTCB-201ENST00000216038 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
RTCB-201ENST00000216038 PLEKHF1Q96S99 279 aa13.16□□□□□ -0.3
RTCB-201ENST00000216038 RRP7AQ9Y3A4 280 aaKnown RBP13.16□□□□□ -0.3
RTCB-201ENST00000216038 ABCC6O95255 1503 aa13.16□□□□□ -0.3
RTCB-201ENST00000216038 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
RTCB-201ENST00000216038 RUNDC1Q96C34 613 aa13.15□□□□□ -0.3
RTCB-201ENST00000216038 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
RTCB-201ENST00000216038 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
RTCB-201ENST00000216038 KDRP35968 1356 aa13.13□□□□□ -0.31
RTCB-201ENST00000216038 FAM208AQ9UK61 1670 aaKnown RBP13.12□□□□□ -0.31
RTCB-201ENST00000216038 NEFMP07197 916 aa13.12□□□□□ -0.31
RTCB-201ENST00000216038 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
RTCB-201ENST00000216038 SLIT2O94813 1529 aa13.11□□□□□ -0.31
RTCB-201ENST00000216038 NRAPQ86VF7 1730 aa13.11□□□□□ -0.31
RTCB-201ENST00000216038 PNNQ9H307 717 aaKnown RBP13.11□□□□□ -0.31
RTCB-201ENST00000216038 NWD2Q9ULI1 1742 aa13.1□□□□□ -0.31
RTCB-201ENST00000216038 CRB1P82279 1406 aa13.1□□□□□ -0.31
RTCB-201ENST00000216038 RAPGEF4Q8WZA2 1011 aa13.1□□□□□ -0.31
RTCB-201ENST00000216038 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
RTCB-201ENST00000216038 USP21Q9UK80 565 aa13.1□□□□□ -0.31
RTCB-201ENST00000216038 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
RTCB-201ENST00000216038 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
RTCB-201ENST00000216038 AFF2P51816 1311 aa13.09□□□□□ -0.31
RTCB-201ENST00000216038 TMPOP42166 694 aaKnown RBP13.09□□□□□ -0.31
RTCB-201ENST00000216038 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
RTCB-201ENST00000216038 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
RTCB-201ENST00000216038 NCAPD2Q15021 1401 aa13.09□□□□□ -0.31
RTCB-201ENST00000216038 MEGF6O75095 1541 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms