RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 PRDM10Q9NQV6 1147 aa20.24■□□□□ 0.83
ITGB4-201ENST00000200181 CNNM1Q9NRU3 951 aa20.24■□□□□ 0.83
ITGB4-201ENST00000200181 GNL3LQ9NVN8 582 aaKnown RBP20.24■□□□□ 0.83
ITGB4-201ENST00000200181 SOGA3Q5TF21 947 aa20.24■□□□□ 0.83
ITGB4-201ENST00000200181 KIAA1328Q86T90 577 aa20.24■□□□□ 0.83
ITGB4-201ENST00000200181 NUP62CLQ9H1M0 184 aa20.24■□□□□ 0.83
ITGB4-201ENST00000200181 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
ITGB4-201ENST00000200181 PDCL2Q8N4E4 241 aa20.24■□□□□ 0.83
ITGB4-201ENST00000200181 UPF3BQ9BZI7 483 aaKnown RBP20.23■□□□□ 0.83
ITGB4-201ENST00000200181 NACAP1Q9BZK3 213 aa20.23■□□□□ 0.83
ITGB4-201ENST00000200181 EPB41L2O43491 1005 aaKnown RBP20.23■□□□□ 0.83
ITGB4-201ENST00000200181 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
ITGB4-201ENST00000200181 CCDC57Q2TAC2 916 aa20.23■□□□□ 0.83
ITGB4-201ENST00000200181 GAS2L2Q8NHY3 880 aa20.23■□□□□ 0.83
ITGB4-201ENST00000200181 SMTNL1A8MU46 457 aa20.23■□□□□ 0.83
ITGB4-201ENST00000200181 EXOSC9Q06265 439 aaKnown RBP20.23■□□□□ 0.83
ITGB4-201ENST00000200181 SLC26A8Q96RN1 970 aa20.23■□□□□ 0.83
ITGB4-201ENST00000200181 TCP11L2Q8N4U5 519 aa20.22■□□□□ 0.83
ITGB4-201ENST00000200181 UBXN4Q92575 508 aa20.22■□□□□ 0.83
ITGB4-201ENST00000200181 PRKCSHP14314 528 aaPredicted RBP20.22■□□□□ 0.83
ITGB4-201ENST00000200181 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
ITGB4-201ENST00000200181 NUP133Q8WUM0 1156 aa20.22■□□□□ 0.83
ITGB4-201ENST00000200181 IBSPP21815 317 aaPredicted RBP20.22■□□□□ 0.83
ITGB4-201ENST00000200181 FILIP1Q7Z7B0 1213 aa20.22■□□□□ 0.83
ITGB4-201ENST00000200181 NOB1Q9ULX3 412 aaKnown RBP20.22■□□□□ 0.83
ITGB4-201ENST00000200181 SHTN1A0MZ66 631 aa20.21■□□□□ 0.83
ITGB4-201ENST00000200181 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.21■□□□□ 0.83
ITGB4-201ENST00000200181 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
ITGB4-201ENST00000200181 ARHGAP29Q52LW3 1261 aa20.21■□□□□ 0.83
ITGB4-201ENST00000200181 CCDC91Q7Z6B0 441 aa20.21■□□□□ 0.83
ITGB4-201ENST00000200181 CFAP45Q9UL16 551 aa20.21■□□□□ 0.83
ITGB4-201ENST00000200181 ESPNB1AK53 854 aa20.21■□□□□ 0.83
ITGB4-201ENST00000200181 TMCO3Q6UWJ1 677 aa20.21■□□□□ 0.83
ITGB4-201ENST00000200181 DESP17661 470 aa20.2■□□□□ 0.82
ITGB4-201ENST00000200181 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
ITGB4-201ENST00000200181 BMP2KQ9NSY1 1161 aaPredicted RBP20.2■□□□□ 0.82
ITGB4-201ENST00000200181 CDCA7LQ96GN5 454 aa20.2■□□□□ 0.82
ITGB4-201ENST00000200181 CRACR2AQ9BSW2 395 aa20.2■□□□□ 0.82
ITGB4-201ENST00000200181 CABP2Q9NPB3 220 aa20.2■□□□□ 0.82
ITGB4-201ENST00000200181 CDKL5O76039 1030 aa20.2■□□□□ 0.82
ITGB4-201ENST00000200181 MAP2K1Q02750 393 aaPredicted RBP20.2■□□□□ 0.82
ITGB4-201ENST00000200181 MAP4K4O95819 1239 aaPredicted RBP20.2■□□□□ 0.82
ITGB4-201ENST00000200181 EIF5P55010 431 aaKnown RBP20.2■□□□□ 0.82
ITGB4-201ENST00000200181 PDE3AQ14432 1141 aa20.2■□□□□ 0.82
ITGB4-201ENST00000200181 NEBLO76041 1014 aa20.19■□□□□ 0.82
ITGB4-201ENST00000200181 MTHFSP49914 203 aa20.19■□□□□ 0.82
ITGB4-201ENST00000200181 PDRG1Q9NUG6 133 aa20.19■□□□□ 0.82
ITGB4-201ENST00000200181 SSBP05455 408 aaKnown RBP eCLIP20.19■□□□□ 0.82
ITGB4-201ENST00000200181 CBX1P83916 185 aa20.18■□□□□ 0.82
ITGB4-201ENST00000200181 ZSCAN31Q96LW9 406 aaPredicted RBP20.18■□□□□ 0.82
ITGB4-201ENST00000200181 GOLGA6L10A0A0M3HER8 536 aa20.17■□□□□ 0.82
ITGB4-201ENST00000200181 BLOC1S2Q6QNY1 142 aa20.17■□□□□ 0.82
ITGB4-201ENST00000200181 SSR1P43307 286 aaKnown RBP20.16■□□□□ 0.82
ITGB4-201ENST00000200181 CCT4P50991 539 aaKnown RBP20.16■□□□□ 0.82
ITGB4-201ENST00000200181 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
ITGB4-201ENST00000200181 ZSCAN25Q6NSZ9 544 aa20.16■□□□□ 0.82
ITGB4-201ENST00000200181 ZNF397Q8NF99 534 aaPredicted RBP20.16■□□□□ 0.82
ITGB4-201ENST00000200181 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
ITGB4-201ENST00000200181 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
ITGB4-201ENST00000200181 NLRP6P59044 892 aa20.16■□□□□ 0.82
ITGB4-201ENST00000200181 SIL1Q9H173 461 aa20.16■□□□□ 0.82
ITGB4-201ENST00000200181 CIZ1Q9ULV3 898 aaPredicted RBP20.15■□□□□ 0.82
ITGB4-201ENST00000200181 ATF3P18847 181 aa20.15■□□□□ 0.82
ITGB4-201ENST00000200181 KIF2AO00139 706 aaPredicted RBP20.15■□□□□ 0.82
ITGB4-201ENST00000200181 CFAP100Q494V2 611 aa20.15■□□□□ 0.82
ITGB4-201ENST00000200181 RBM42Q9BTD8 480 aaKnown RBP20.15■□□□□ 0.82
ITGB4-201ENST00000200181 JPH4Q96JJ6 628 aa20.15■□□□□ 0.82
ITGB4-201ENST00000200181 TICAM2Q86XR7 235 aa20.14■□□□□ 0.82
ITGB4-201ENST00000200181 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
ITGB4-201ENST00000200181 BACH2Q9BYV9 841 aa20.14■□□□□ 0.81
ITGB4-201ENST00000200181 MCM4P33991 863 aa20.14■□□□□ 0.81
ITGB4-201ENST00000200181 MAP3K11Q16584 847 aa20.14■□□□□ 0.81
ITGB4-201ENST00000200181 CCDC113Q9H0I3 377 aa20.14■□□□□ 0.81
ITGB4-201ENST00000200181 MATR3P43243 847 aaKnown RBP eCLIP20.14■□□□□ 0.81
ITGB4-201ENST00000200181 JAKMIP1Q96N16 626 aaKnown RBP20.14■□□□□ 0.81
ITGB4-201ENST00000200181 SRCIN1Q9C0H9 1055 aa20.14■□□□□ 0.81
ITGB4-201ENST00000200181 ZSCAN30Q86W11 494 aa20.13■□□□□ 0.81
ITGB4-201ENST00000200181 STAC3Q96MF2 364 aa20.13■□□□□ 0.81
ITGB4-201ENST00000200181 MAP9Q49MG5 647 aa20.13■□□□□ 0.81
ITGB4-201ENST00000200181 CCDC97Q96F63 343 aaPredicted RBP20.13■□□□□ 0.81
ITGB4-201ENST00000200181 PTPN14Q15678 1187 aa20.12■□□□□ 0.81
ITGB4-201ENST00000200181 ZSCAN12O43309 604 aa20.12■□□□□ 0.81
ITGB4-201ENST00000200181 PPP2R1AP30153 589 aa20.12■□□□□ 0.81
ITGB4-201ENST00000200181 CASQ1P31415 396 aa20.12■□□□□ 0.81
ITGB4-201ENST00000200181 WASF1Q92558 559 aa20.12■□□□□ 0.81
ITGB4-201ENST00000200181 CETN2P41208 172 aa20.12■□□□□ 0.81
ITGB4-201ENST00000200181 SPA17Q15506 151 aa20.12■□□□□ 0.81
ITGB4-201ENST00000200181 NF2P35240 595 aa20.11■□□□□ 0.81
ITGB4-201ENST00000200181 POTEJP0CG39 1038 aa20.11■□□□□ 0.81
ITGB4-201ENST00000200181 IMMTQ16891 758 aaKnown RBP20.11■□□□□ 0.81
ITGB4-201ENST00000200181 CHD1LQ86WJ1 897 aa20.11■□□□□ 0.81
ITGB4-201ENST00000200181 HDGFL1Q5TGJ6 251 aa20.11■□□□□ 0.81
ITGB4-201ENST00000200181 UBAC1Q9BSL1 405 aa20.11■□□□□ 0.81
ITGB4-201ENST00000200181 BCAR3O75815 825 aa20.11■□□□□ 0.81
ITGB4-201ENST00000200181 SYCE3A1L190 88 aa20.11■□□□□ 0.81
ITGB4-201ENST00000200181 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
ITGB4-201ENST00000200181 TRERF1Q96PN7 1200 aa20.1■□□□□ 0.81
ITGB4-201ENST00000200181 CTNNA3Q9UI47 895 aa20.1■□□□□ 0.81
ITGB4-201ENST00000200181 CEP131Q9UPN4 1083 aa20.1■□□□□ 0.81
ITGB4-201ENST00000200181 STAMBPO95630 424 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms