RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Utp14aQ640M1 767 aaKnown RBP10.67□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Cc2d1aQ8K1A6 943 aa10.67□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Dhx29Q6PGC1 1365 aaKnown RBP10.67□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Arid3cA6PWV5 409 aa10.67□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Gm7361D3Z6R1 267 aa10.67□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Prpf4bQ61136 1007 aaKnown RBP10.67□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Txndc2Q6P902 515 aa10.67□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Dapk1Q80YE7 1442 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Kif3bQ61771 747 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Arhgef18Q6P9R4 1021 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Gigyf2Q6Y7W8 1291 aaKnown RBP10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 SarnpQ9D1J3 210 aaKnown RBP10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Gm44503E9PYU5 387 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Lmbr1Q9JIT0 490 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 ZfxP17012 799 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Tubb5P99024 444 aaKnown RBP10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Q8C5K5 320 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Ssr1Q9CY50 286 aaKnown RBP10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Cux2P70298 1426 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Secisbp2lQ6A098 1086 aaKnown RBP10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Ankrd1Q9CR42 319 aa10.66□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Gbp2Q9Z0E6 589 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Cep135Q6P5D4 1140 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Cep89Q9CZX2 791 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 DonsonQ9QXP4 560 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Hs1bp3Q3TC93 395 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Samm50Q8BGH2 469 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Rpgrip1lQ8CG73 1264 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 SltmQ8CH25 1031 aaKnown RBP10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Erc1Q99MI1 1120 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Snw1Q9CSN1 536 aaKnown RBP10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Cetn2Q9R1K9 172 aa10.65□□□□□ -0.7
Ptpre-204ENSMUST00000209979 Akap2O54931 893 aa10.65□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Cdkl5Q3UTQ8 938 aa10.65□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Rbm28Q8CGC6 750 aaKnown RBP10.65□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Zkscan7E9PVW1 718 aa10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Cdr1E9Q0B4 517 aa10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Kif18aQ91WD7 886 aa10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Tax1bp1Q3UKC1 814 aaKnown RBP10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ehbp1Q69ZW3 1231 aa10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Efcab5A0JP43 1406 aa10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Usp16Q99LG0 825 aa10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Cpsf2O35218 782 aaKnown RBP10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Mcm5P49718 733 aa10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ddx19aQ61655 478 aaKnown RBP10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Rhot2Q8JZN7 620 aa10.64□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ncapg2Q6DFV1 1138 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ctage5Q8R311 779 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Fam114a1Q9D281 569 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Mkrn1Q9QXP6 481 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Gbp8Q2V6D6 525 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Plcd3Q8K2J0 785 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Sept14Q9DA97 430 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Cyp26c1B2RXA7 518 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Zfp444Q3TDV8 331 aaKnown RBP10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Pde1cQ64338 706 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ppp1r9bQ6R891 817 aaKnown RBP10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Iffo1Q8BXL9 562 aa10.63□□□□□ -0.71
Ptpre-204ENSMUST00000209979 CftrP26361 1476 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ccdc42Q5SV66 316 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Kif5bQ61768 963 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Luzp1Q8R4U7 1068 aaKnown RBP10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Zeb2Q9R0G7 1215 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ccdc114Q3UX62 658 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 4931400O07RikQ9D4M5 137 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ccnb3Q810T2 1396 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 NinlQ6ZQ12 1394 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Gm1979E9QAN3 267 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Cep131Q62036 1060 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Tmc1Q8R4P5 757 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Akap8Q9DBR0 687 aaKnown RBP10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Lekr1B2RVN1 116 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Adcy5P84309 1262 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Cog6Q8R3I3 657 aa10.62□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Diaph1O08808 1255 aa10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Sart1Q9Z315 806 aaKnown RBP10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ncbp3Q8BZR9 615 aaKnown RBP10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Nphp1Q9QY53 687 aa10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ddx23D3Z0M9 819 aaKnown RBP10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ccdc152E9PX14 254 aa10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Apol7cQ8C6E1 369 aa10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 4921530L21RikQ9CQ47 274 aa10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ap3b2Q9JME5 1082 aa10.61□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Wwc1Q5SXA9 1104 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 RalylQ8BTF8 293 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Wasf1Q8R5H6 559 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Smtnl1Q99LM3 459 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Mis12Q9CY25 206 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Armc9Q9D2I5 817 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Neurod6P48986 337 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Babam1Q3UI43 333 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ppip5k2Q6ZQB6 1129 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Sv2bQ8BG39 683 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Brms1Q99N20 246 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 WrnO09053 1401 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Slc4a2P13808 1237 aaKnown RBP10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Synpo2Q91YE8 1087 aaKnown RBP10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 MvpQ9EQK5 861 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ercc3P49135 783 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Fan1Q69ZT1 1020 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms