RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 GakQ99KY4 1305 aa12.51□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Pard3Q99NH2 1333 aa12.51□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Znf316Q6PGE4 1016 aa12.5□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Hirip3Q8BLH7 601 aa12.5□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Lrit1Q8K099 624 aa12.5□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Os9Q8K2C7 672 aa12.5□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Zeb2Q9R0G7 1215 aa12.5□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Mast2Q60592 1734 aa12.49□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Zbtb7bQ64321 544 aa12.48□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Fan1Q69ZT1 1020 aa12.48□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Erbb3Q61526 1339 aa12.47□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Ppfibp2O35711 882 aa12.47□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Rad23bP54728 416 aa12.47□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Kdm2aP59997 1161 aa12.47□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Pim2Q62070 370 aa12.47□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Trpc5Q9QX29 975 aa12.47□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Atp2b2Q9R0K7 1198 aa12.47□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Nid2O88322 1403 aa12.46□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Gm21698A0A087WQP8 267 aa12.46□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Gm21671G3UY31 267 aa12.46□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 TimelessQ9R1X4 1197 aa12.46□□□□□ -0.41
Pdlim5-209ENSMUST00000196908 Srpk2O54781 681 aaKnown RBP12.45□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 St18Q80TY4 1045 aa12.45□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Mug2P28666 1451 aa12.45□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Bcl9lQ67FY2 1494 aa12.45□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Kif23E9Q5G3 953 aa12.44□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Card11Q8CIS0 1159 aa12.44□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Mink1Q9JM52 1308 aa12.43□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Puf60Q3UEB3 564 aaKnown RBP12.43□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Fchsd2Q3USJ8 740 aa12.43□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 AtrnQ9WU60 1428 aa12.43□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Gpr162Q3UN16 588 aa12.42□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Ppm1fQ8CGA0 452 aa12.42□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Mdc1Q5PSV9 1707 aa12.41□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Slx1bQ8BX32 270 aa12.41□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Lrrc7Q80TE7 1490 aa12.4□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Pde4dQ01063 747 aa12.4□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Ddb1Q3U1J4 1140 aaKnown RBP12.4□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Q8BT18 775 aa12.4□□□□□ -0.42
Pdlim5-209ENSMUST00000196908 Supt5hO55201 1082 aaKnown RBP12.39□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Prdm10Q3UTQ7 1184 aa12.39□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Ankrd23Q812A3 306 aa12.39□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Atad2Q8CDM1 1040 aa12.39□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Vps33bP59016 617 aa12.38□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Ciz1Q8VEH2 845 aa12.38□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 IncenpQ9WU62 880 aa12.38□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Sbno1Q689Z5 1390 aa12.38□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Podxl2Q8CAE9 603 aa12.37□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Washc2Q6PGL7 1334 aa12.37□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Arhgap33Q80YF9 1305 aa12.37□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Tet3Q8BG87 1668 aa12.36□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Gm20521D3Z5F7 333 aa12.36□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Bsdc1Q80Y55 427 aa12.36□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 IqubQ8CDK3 788 aa12.36□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Nwd2Q6P5U7 1742 aa12.36□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Uhrf1bp1lA2RSJ4 1457 aa12.35□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Mphosph9A6H5Y1 991 aa12.35□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Fam184bQ0KK56 942 aa12.35□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Repin1Q5U4E2 545 aa12.35□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Emilin1Q99K41 1017 aa12.35□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Abca14E9Q8F8 1683 aa12.35□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Stag3O70576 1240 aa12.34□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Magea6O89010 325 aa12.34□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Magea3Q6T340 320 aa12.34□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Kat6bQ8BRB7 1872 aa12.34□□□□□ -0.43
Pdlim5-209ENSMUST00000196908 Adgre1Q61549 931 aa12.33□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Usp21Q9QZL6 566 aa12.33□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Dot1lQ6XZL8 1540 aa12.32□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Tulp4Q9JIL5 1547 aa12.32□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Nsd3Q6P2L6 1439 aa12.32□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Ifit1bl1D3Z6F0 470 aa12.32□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Ankrd13dQ6PD24 605 aa12.32□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Gimap6Q8K349 305 aa12.32□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Ndufv2Q9D6J6 248 aa12.32□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Card10P58660 1021 aa12.31□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Pdap1Q3UHX2 181 aaKnown RBP12.31□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Amotl2Q8K371 772 aa12.31□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Fam198bQ3UPI1 517 aa12.3□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Fam181bQ80VF6 417 aa12.3□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Cdk19Q8BWD8 501 aa12.3□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Mtfr1lQ9CWE0 289 aa12.3□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Mon2Q80TL7 1715 aa12.3□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Frmpd2A0A140LI67 1392 aa12.3□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Hmx1O70218 332 aa12.29□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Mrps5Q99N87 432 aaKnown RBP12.29□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Cdk5rap2Q8K389 1822 aa12.29□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Akap11E9Q777 1895 aa12.29□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Pkd2O35245 966 aa12.28□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Exoc5Q3TPX4 708 aa12.28□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Pak3Q61036 559 aa12.28□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 RgmbQ7TQ33 436 aa12.28□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Afg3l2Q8JZQ2 802 aaKnown RBP12.28□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Ginm1Q91WR6 327 aa12.28□□□□□ -0.44
Pdlim5-209ENSMUST00000196908 Kank4Q6P9J5 1016 aa12.27□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Pnpla7A2AJ88 1352 aa12.27□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 MycnP03966 462 aaKnown RBP12.26□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Sik1Q60670 779 aa12.26□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 VwdeQ6DFV8 926 aa12.26□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Rnaseh2aQ9CWY8 301 aa12.25□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Ncoa4Q5U4H9 625 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 270.8 ms