RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 FancaQ9JL70 1439 aa18.59■□□□□ 0.57
Rnf4-207ENSMUST00000182709 TmpoQ61033 693 aaKnown RBP18.59■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Eya1P97767 591 aa18.58■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Mbd3Q9Z2D8 285 aaKnown RBP18.58■□□□□ 0.57
Rnf4-207ENSMUST00000182709 Ttc41Q692V3 1318 aa18.58■□□□□ 0.56
Rnf4-207ENSMUST00000182709 4930567H17RikQ3V0K5 233 aa18.58■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Astn2Q80Z10 1352 aa18.57■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Ankrd50F7BE84 1390 aa18.57■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Duxf3A0A0N4SV92 674 aa18.57■□□□□ 0.56
Rnf4-207ENSMUST00000182709 NudcO35685 332 aaKnown RBP18.56■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Tnrc6bQ8BKI2 1810 aaKnown RBP18.56■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Prim1P20664 417 aa18.55■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Tnnt1O88346 262 aa18.55■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Tns3Q5SSZ5 1440 aa18.55■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Abcc10Q8R4P9 1501 aa18.54■□□□□ 0.56
Rnf4-207ENSMUST00000182709 TatQ8QZR1 454 aa18.54■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Rlbp1Q9Z275 317 aa18.54■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Hoxb7P09024 217 aa18.54■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Maco1Q7TQE6 664 aaKnown RBP18.54■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Ttc21aQ8C0S4 1314 aa18.53■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Amotl2Q8K371 772 aa18.53■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Topaz1E5FYH1 1653 aa18.52■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Hoxc9P09633 260 aa18.52■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Ciz1Q8VEH2 845 aa18.52■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Rtf1A2AQ19 715 aaKnown RBP18.52■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Gnai1B2RSH2 354 aa18.52■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Plekhm2Q80TQ5 1018 aa18.52■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Gnai3Q9DC51 354 aa18.52■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Kdm2bQ6P1G2 1309 aa18.52■□□□□ 0.56
Rnf4-207ENSMUST00000182709 Dnajc10Q9DC23 793 aa18.52■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Vamp4O70480 141 aa18.51■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Znf335A2A5K6 1337 aa18.5■□□□□ 0.55
Rnf4-207ENSMUST00000182709 ArxO35085 564 aa18.49■□□□□ 0.55
Rnf4-207ENSMUST00000182709 PaskQ8CEE6 1383 aa18.48■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Trim30dE9PWL0 497 aa18.48■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Atf3Q60765 181 aa18.48■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Q3UPC7 1272 aa18.48■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Bcl9Q9D219 1425 aa18.48■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Farp2Q91VS8 1065 aa18.47■□□□□ 0.55
Rnf4-207ENSMUST00000182709 EspnQ9ET47 871 aa18.47■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Parp14Q2EMV9 1817 aa18.47■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Kif20bQ80WE4 1774 aaKnown RBP18.47■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Rims2Q9EQZ7 1530 aa18.46■□□□□ 0.55
Rnf4-207ENSMUST00000182709 Aifm3Q3TY86 605 aa18.46■□□□□ 0.55
Rnf4-207ENSMUST00000182709 TimelessQ9R1X4 1197 aa18.46■□□□□ 0.55
Rnf4-207ENSMUST00000182709 C3P01027 1663 aa18.45■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Cdk12Q14AX6 1484 aaKnown RBP18.45■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Rapgef3Q8VCC8 918 aa18.45■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Med1Q925J9 1575 aa18.45■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Dzip1Q8BMD2 852 aa18.45■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Smc5Q8CG46 1101 aaKnown RBP18.44■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Tmem2Q5FWI3 1383 aa18.44■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Ipo4Q8VI75 1082 aa18.44■□□□□ 0.54
Rnf4-207ENSMUST00000182709 N4bp2F8VQG7 1678 aaKnown RBP18.44■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Wdr17E9Q271 1322 aa18.43■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Arap3Q8R5G7 1538 aa18.43■□□□□ 0.54
Rnf4-207ENSMUST00000182709 CemipQ8BI06 1361 aa18.43■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Dixdc1Q80Y83 711 aa18.43■□□□□ 0.54
Rnf4-207ENSMUST00000182709 CanxP35564 591 aaKnown RBP18.42■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Alpk3Q924C5 1678 aa18.42■□□□□ 0.54
Rnf4-207ENSMUST00000182709 D430041D05RikF6ZGR6 1678 aa18.42■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Pnmal2G3X9N3 661 aa18.42■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Ric3Q8BPM6 367 aa18.42■□□□□ 0.54
Rnf4-207ENSMUST00000182709 KarsQ99MN1 595 aaKnown RBP18.42■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Q3TQI7 289 aaKnown RBP18.41■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Pknox2Q8BG99 474 aa18.41■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Amigo3Q8C2S7 508 aa18.41■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Ccdc171E9Q1U1 1324 aa18.41■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Uhrf1bp1B2KF50 1429 aa18.41■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Kif1aP33173 1695 aa18.41■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Pik3c2aQ61194 1686 aa18.41■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Nsd3Q6P2L6 1439 aa18.41■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Camta1A2A891 1682 aa18.4■□□□□ 0.54
Rnf4-207ENSMUST00000182709 AU019823E9PUQ3 292 aa18.4■□□□□ 0.54
Rnf4-207ENSMUST00000182709 HypkQ9CR41 129 aa18.4■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Gimap6Q8K349 305 aa18.39■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Acsbg1Q99PU5 721 aa18.39■□□□□ 0.54
Rnf4-207ENSMUST00000182709 C5P06684 1680 aa18.39■□□□□ 0.54
Rnf4-207ENSMUST00000182709 Sipa1l2Q80TE4 1722 aa18.39■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Gm21698A0A087WQP8 267 aa18.39■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Gm10471E9Q1C7 252 aa18.39■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Gm21671G3UY31 267 aa18.39■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Cc2d1aQ8K1A6 943 aa18.39■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Fmnl2A2APV2 1086 aa18.38■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Znf521Q6KAS7 1311 aa18.38■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Bcl2l13P59017 434 aa18.37■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Ncbp3Q8BZR9 615 aaKnown RBP18.37■□□□□ 0.53
Rnf4-207ENSMUST00000182709 NalcnQ8BXR5 1738 aa18.37■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Als2Q920R0 1651 aa18.37■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Aldh1l1Q8R0Y6 902 aa18.36■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Sart3Q9JLI8 962 aaKnown RBP18.36■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Fam135bQ9DAI6 1403 aa18.36■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Col14a1Q80X19 1797 aa18.36■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Atp7bQ64446 1462 aa18.35■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Rimbp3Q3V0F0 1606 aa18.35■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Ncapd2Q8K2Z4 1392 aa18.35■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Nkx1-2P42580 305 aa18.35■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Col16a1Q8BLX7 1580 aa18.34■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Fam83gQ5SWY7 812 aa18.33■□□□□ 0.53
Rnf4-207ENSMUST00000182709 Kcnh5Q920E3 988 aa18.33■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms