RNA–Protein interactions for RNA: ENSMUST00000172269.1

Sptbn4-207, Transcript of Spectrin beta chain, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Sptbn4, Length 8,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-207ENSMUST00000172269 Smc1aQ9CU62 1233 aaKnown RBP21.85■■□□□ 1.09
Sptbn4-207ENSMUST00000172269 Noc2lQ9WV70 747 aaKnown RBP21.85■■□□□ 1.09
Sptbn4-207ENSMUST00000172269 4921504E06RikQ8CET2 560 aa21.84■■□□□ 1.09
Sptbn4-207ENSMUST00000172269 Zscan10Q3URR7 782 aa21.84■■□□□ 1.09
Sptbn4-207ENSMUST00000172269 CftrP26361 1476 aa21.84■■□□□ 1.09
Sptbn4-207ENSMUST00000172269 Cnnm3Q32NY4 713 aa21.83■■□□□ 1.09
Sptbn4-207ENSMUST00000172269 Fbf1A2A870 1173 aa21.83■■□□□ 1.09
Sptbn4-207ENSMUST00000172269 Ccdc172Q810N9 267 aa21.83■■□□□ 1.09
Sptbn4-207ENSMUST00000172269 Slu7Q8BHJ9 585 aa21.83■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Cetn1P41209 172 aa21.83■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Stard3nlQ9DCI3 235 aa21.82■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Gm18336A0A140LIU8 765 aa21.82■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Ift57Q8BXG3 429 aa21.82■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Secisbp2lQ6A098 1086 aaKnown RBP21.82■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Cecr2E9Q2Z1 1453 aa21.82■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Atf3Q60765 181 aa21.81■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Shq1Q7TMX5 569 aa21.81■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Rbm5Q91YE7 815 aaKnown RBP21.81■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Sept7O55131 436 aa21.8■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Stk3Q9JI10 497 aa21.8■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Naa15Q80UM3 865 aaKnown RBP21.8■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Rufy2Q8R4C2 606 aa21.8■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Riok1Q922Q2 567 aa21.8■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Gigyf2Q6Y7W8 1291 aaKnown RBP21.79■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Themis2Q91YX0 663 aa21.79■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Nol12Q8BG17 217 aa21.79■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Skor1Q8BX46 964 aa21.79■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 SrrtQ99MR6 875 aaKnown RBP21.79■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Trim34bJ3QNR8 485 aa21.78■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Rab3il1Q8VDV3 383 aa21.78■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Gnl2Q99LH1 728 aaKnown RBP21.78■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Trap1aP19473 224 aa21.78■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 NcapgE9PWG6 1004 aa21.78■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Luzp1Q8R4U7 1068 aaKnown RBP21.78■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Erich4Q3UNU4 136 aa21.78■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Gm1979E9QAN3 267 aa21.78■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Mink1Q9JM52 1308 aa21.77■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Znf287Q9EQB9 759 aa21.77■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Gbp8Q2V6D6 525 aa21.77■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Ctage5Q8R311 779 aa21.77■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Knop1Q9Z2Q2 478 aaKnown RBP21.77■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Sart1Q9Z315 806 aaKnown RBP21.77■■□□□ 1.08
Sptbn4-207ENSMUST00000172269 Jade2Q6ZQF7 829 aa21.77■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 HypkQ9CR41 129 aa21.77■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Tsg101Q61187 391 aa21.76■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Zfp853A0A1D5RM95 733 aa21.76■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Tmc1Q8R4P5 757 aa21.76■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Ppp6r1Q7TSI3 856 aa21.75■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Wdr33Q8K4P0 1330 aaKnown RBP21.75■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Gsdma2Q32M21 443 aa21.75■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Brms1Q99N20 246 aa21.75■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Smc1bQ920F6 1248 aa21.75■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Clul1Q3ZRW6 464 aa21.75■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Sdccag8Q80UF4 717 aa21.74■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Gm42641I6L9G2 585 aa21.74■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 AtripQ8BMG1 785 aa21.74■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Gm21671G3UY31 267 aa21.74■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Tax1bp1Q3UKC1 814 aaKnown RBP21.74■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Olfml1Q8BSH2 233 aa21.74■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Shtn1Q8K2Q9 631 aa21.74■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Cavin4A2AMM0 362 aa21.74■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Abcf1Q6P542 837 aaKnown RBP21.73■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Rbm10Q99KG3 930 aaKnown RBP21.73■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Mctp1E9PV86 951 aa21.73■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Rab3gap2Q8BMG7 1366 aa21.73■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Znf526Q8BI66 675 aa21.73■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Esx1O88933 382 aa21.73■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Ripk4Q9ERK0 786 aa21.73■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Vps37dQ810I0 261 aa21.72■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Gbp1Q01514 589 aa21.72■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Jakmip3Q5DTN8 844 aa21.72■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Fsd2Q8BZ52 692 aa21.72■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Nphp1Q9QY53 687 aa21.71■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Calml4Q91WQ9 153 aa21.71■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Cfap57Q9D180 1249 aa21.71■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Zfp42P22227 288 aa21.71■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Rnf34Q99KR6 376 aa21.71■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Phldb1Q6PDH0 1371 aaKnown RBP21.71■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 SlmapQ3URD3 845 aa21.71■■□□□ 1.07
Sptbn4-207ENSMUST00000172269 Fsd1Q7TPM6 496 aa21.7■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 TatQ8QZR1 454 aa21.7■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Iqca1Q9CUL5 857 aa21.7■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Rad54l2Q99NG0 1466 aa21.7■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Cc2d2bA0A286YDU8 1405 aa21.7■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Bbof1Q3V079 533 aa21.7■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Smco2Q9DA21 347 aa21.7■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Tnpo1Q8BFY9 898 aaKnown RBP21.7■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Maats1Q8BRC6 783 aa21.69■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Exoc8Q6PGF7 716 aa21.69■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Nup88Q8CEC0 753 aaKnown RBP21.69■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 ImmtQ8CAQ8 757 aaKnown RBP21.69■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Trim11Q99PQ2 467 aa21.69■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Trim25Q61510 634 aaKnown RBP21.69■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 NinlQ6ZQ12 1394 aa21.68■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Gm21680A0A0G2JGR8 267 aa21.68■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Gle1Q8R322 699 aa21.68■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Tmco5aQ9D9D5 303 aa21.68■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Nop53Q8BK35 484 aaKnown RBP21.67■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Pank1Q8K4K6 548 aa21.67■■□□□ 1.06
Sptbn4-207ENSMUST00000172269 Apol7aB2RT54 418 aa21.67■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms