RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Kif16bB1AVY7 1312 aa10.39□□□□□ -0.75
Cd44-208ENSMUST00000111198 Fer1l6E0CZ42 1862 aa10.39□□□□□ -0.75
Cd44-208ENSMUST00000111198 Hs6st3Q9QYK4 470 aa10.38□□□□□ -0.75
Cd44-208ENSMUST00000111198 Trap1aP19473 224 aa10.37□□□□□ -0.75
Cd44-208ENSMUST00000111198 Slx1bQ8BX32 270 aa10.37□□□□□ -0.75
Cd44-208ENSMUST00000111198 Kat6bQ8BRB7 1872 aa10.37□□□□□ -0.75
Cd44-208ENSMUST00000111198 Gm21190A0A0G2JGJ6 266 aa10.36□□□□□ -0.75
Cd44-208ENSMUST00000111198 Wdr43Q6ZQL4 677 aaKnown RBP10.36□□□□□ -0.75
Cd44-208ENSMUST00000111198 Supt16hQ920B9 1047 aa10.36□□□□□ -0.75
Cd44-208ENSMUST00000111198 Zeb2Q9R0G7 1215 aa10.36□□□□□ -0.75
Cd44-208ENSMUST00000111198 Chd4Q6PDQ2 1915 aaKnown RBP10.36□□□□□ -0.75
Cd44-208ENSMUST00000111198 Ccdc6D3YZP9 469 aa10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Card10P58660 1021 aa10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Dennd6aQ8BH65 605 aa10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Kcnh5Q920E3 988 aa10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Ly75Q60767 1723 aa10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Nup153E9Q3G8 1462 aaKnown RBP10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Mdc1Q5PSV9 1707 aa10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Mast2Q60592 1734 aa10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Pm20d1Q8C165 503 aa10.35□□□□□ -0.75
Cd44-208ENSMUST00000111198 Astn2Q80Z10 1352 aa10.34□□□□□ -0.75
Cd44-208ENSMUST00000111198 Cnksr2Q80YA9 1032 aa10.34□□□□□ -0.75
Cd44-208ENSMUST00000111198 Sugp2Q8CH09 1067 aa10.34□□□□□ -0.75
Cd44-208ENSMUST00000111198 Nlgn1Q99K10 843 aa10.34□□□□□ -0.75
Cd44-208ENSMUST00000111198 TnrQ8BYI9 1358 aa10.34□□□□□ -0.75
Cd44-208ENSMUST00000111198 Slc24a1Q91WD8 1130 aa10.34□□□□□ -0.75
Cd44-208ENSMUST00000111198 Fbxo3Q9DC63 480 aa10.34□□□□□ -0.75
Cd44-208ENSMUST00000111198 Cdk12Q14AX6 1484 aaKnown RBP10.33□□□□□ -0.76
Cd44-208ENSMUST00000111198 Amotl2Q8K371 772 aa10.33□□□□□ -0.76
Cd44-208ENSMUST00000111198 Ubr1O70481 1757 aa10.33□□□□□ -0.76
Cd44-208ENSMUST00000111198 Kiaa0319Q5SZV5 1081 aa10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Skida1Q80YR3 822 aa10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Nckap5lQ6GQX2 1323 aa10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Robo1O89026 1612 aa10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Fmnl2A2APV2 1086 aa10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Ildr2B5TVM2 661 aa10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Scaf1Q5U4C3 1256 aaKnown RBP10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Adamtsl1Q8BLI0 1745 aa10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Dnajc10Q9DC23 793 aa10.32□□□□□ -0.76
Cd44-208ENSMUST00000111198 Scn7aB1AYL1 1681 aa10.31□□□□□ -0.76
Cd44-208ENSMUST00000111198 Kdm2bQ6P1G2 1309 aa10.31□□□□□ -0.76
Cd44-208ENSMUST00000111198 Amer1Q7TS75 1132 aa10.31□□□□□ -0.76
Cd44-208ENSMUST00000111198 NrdcQ8BHG1 1161 aa10.31□□□□□ -0.76
Cd44-208ENSMUST00000111198 TatQ8QZR1 454 aa10.31□□□□□ -0.76
Cd44-208ENSMUST00000111198 Cabp4Q8VHC5 271 aa10.31□□□□□ -0.76
Cd44-208ENSMUST00000111198 Akap11E9Q777 1895 aa10.31□□□□□ -0.76
Cd44-208ENSMUST00000111198 CemipQ8BI06 1361 aa10.3□□□□□ -0.76
Cd44-208ENSMUST00000111198 Sin3aQ60520 1274 aaKnown RBP10.3□□□□□ -0.76
Cd44-208ENSMUST00000111198 Ano8Q6PB70 1060 aa10.3□□□□□ -0.76
Cd44-208ENSMUST00000111198 Taok3Q8BYC6 898 aa10.3□□□□□ -0.76
Cd44-208ENSMUST00000111198 Map2P20357 1828 aa10.3□□□□□ -0.76
Cd44-208ENSMUST00000111198 Ppp6r1Q7TSI3 856 aa10.29□□□□□ -0.76
Cd44-208ENSMUST00000111198 Cwc22Q8C5N3 908 aaKnown RBP10.29□□□□□ -0.76
Cd44-208ENSMUST00000111198 Nwd2Q6P5U7 1742 aa10.28□□□□□ -0.76
Cd44-208ENSMUST00000111198 Eif5bQ05D44 1216 aaKnown RBP10.28□□□□□ -0.76
Cd44-208ENSMUST00000111198 RgmbQ7TQ33 436 aa10.28□□□□□ -0.76
Cd44-208ENSMUST00000111198 Nol11Q8BJW5 723 aaKnown RBP10.28□□□□□ -0.76
Cd44-208ENSMUST00000111198 Riok3Q9DBU3 519 aaKnown RBP10.28□□□□□ -0.76
Cd44-208ENSMUST00000111198 FancaQ9JL70 1439 aa10.28□□□□□ -0.76
Cd44-208ENSMUST00000111198 Gtf3c3Q3TMP1 882 aa10.27□□□□□ -0.77
Cd44-208ENSMUST00000111198 Mrs2Q5NCE8 434 aa10.27□□□□□ -0.77
Cd44-208ENSMUST00000111198 4930523C07RikE9Q2T4 99 aa10.26□□□□□ -0.77
Cd44-208ENSMUST00000111198 Vps33bP59016 617 aa10.26□□□□□ -0.77
Cd44-208ENSMUST00000111198 4933416C03RikQ3V063 378 aa10.26□□□□□ -0.77
Cd44-208ENSMUST00000111198 FocadA2AKG8 1798 aa10.26□□□□□ -0.77
Cd44-208ENSMUST00000111198 Igsf3Q6ZQA6 1194 aa10.25□□□□□ -0.77
Cd44-208ENSMUST00000111198 OscarQ8VBT3 265 aa10.25□□□□□ -0.77
Cd44-208ENSMUST00000111198 Uhrf1bp1lA2RSJ4 1457 aa10.25□□□□□ -0.77
Cd44-208ENSMUST00000111198 Slit1Q80TR4 1531 aa10.25□□□□□ -0.77
Cd44-208ENSMUST00000111198 VirmaA2AIV2 1811 aaKnown RBP10.25□□□□□ -0.77
Cd44-208ENSMUST00000111198 Spryd3E9Q9B3 442 aa10.24□□□□□ -0.77
Cd44-208ENSMUST00000111198 CrklP47941 303 aa10.24□□□□□ -0.77
Cd44-208ENSMUST00000111198 Pak3Q61036 559 aa10.24□□□□□ -0.77
Cd44-208ENSMUST00000111198 Ankrd23Q812A3 306 aa10.24□□□□□ -0.77
Cd44-208ENSMUST00000111198 Plekhd1B2RPU2 505 aa10.23□□□□□ -0.77
Cd44-208ENSMUST00000111198 Tmem132eQ6IEE6 982 aa10.23□□□□□ -0.77
Cd44-208ENSMUST00000111198 OptnQ8K3K8 584 aa10.23□□□□□ -0.77
Cd44-208ENSMUST00000111198 Mst1rQ62190 1378 aa10.23□□□□□ -0.77
Cd44-208ENSMUST00000111198 Fam184bQ0KK56 942 aa10.23□□□□□ -0.77
Cd44-208ENSMUST00000111198 Ginm1Q91WR6 327 aa10.23□□□□□ -0.77
Cd44-208ENSMUST00000111198 Ddb1Q3U1J4 1140 aaKnown RBP10.22□□□□□ -0.77
Cd44-208ENSMUST00000111198 Birc3O08863 600 aa10.21□□□□□ -0.77
Cd44-208ENSMUST00000111198 Zpr1Q62384 459 aa10.21□□□□□ -0.77
Cd44-208ENSMUST00000111198 Hoxc9P09633 260 aa10.21□□□□□ -0.78
Cd44-208ENSMUST00000111198 Slc4a2P13808 1237 aaKnown RBP10.21□□□□□ -0.78
Cd44-208ENSMUST00000111198 Apba2P98084 750 aa10.21□□□□□ -0.78
Cd44-208ENSMUST00000111198 Ccdc27Q3V036 639 aa10.21□□□□□ -0.78
Cd44-208ENSMUST00000111198 Ccdc9Q8VC31 543 aaKnown RBP10.21□□□□□ -0.78
Cd44-208ENSMUST00000111198 Zcrb1Q9CZ96 217 aaKnown RBP10.21□□□□□ -0.78
Cd44-208ENSMUST00000111198 PrxO55103 1391 aa10.2□□□□□ -0.78
Cd44-208ENSMUST00000111198 IbtkQ6ZPR6 1352 aaKnown RBP10.2□□□□□ -0.78
Cd44-208ENSMUST00000111198 GakQ99KY4 1305 aa10.2□□□□□ -0.78
Cd44-208ENSMUST00000111198 Tmf1B9EKI3 1091 aa10.2□□□□□ -0.78
Cd44-208ENSMUST00000111198 Hoxb7P09024 217 aa10.2□□□□□ -0.78
Cd44-208ENSMUST00000111198 TkfcQ8VC30 578 aa10.19□□□□□ -0.78
Cd44-208ENSMUST00000111198 Ptpn23Q6PB44 1692 aa10.19□□□□□ -0.78
Cd44-208ENSMUST00000111198 PnisrA2AJT4 805 aaKnown RBP10.19□□□□□ -0.78
Cd44-208ENSMUST00000111198 Sik1Q60670 779 aa10.19□□□□□ -0.78
Cd44-208ENSMUST00000111198 Rad17Q6NXW6 688 aa10.19□□□□□ -0.78
Cd44-208ENSMUST00000111198 GalcP54818 684 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms