RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Cetn2Q9R1K9 172 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Rsph6aQ8CDR2 708 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 EzrP26040 586 aaKnown RBP12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Myo1bP46735 1107 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Dnajc2P54103 621 aaKnown RBP12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Atl3Q91YH5 541 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Fam50bQ9WTJ8 334 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Dhx8A2A4P0 1244 aaKnown RBP12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 SafbD3YXK2 937 aaKnown RBP12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Fsd2Q8BZ52 692 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Samm50Q8BGH2 469 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Spg7Q3ULF4 781 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Def6Q8C2K1 630 aa12.28□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Ankib1Q6ZPS6 1085 aa12.27□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Kiaa1211Q5PR69 1207 aa12.27□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Wasf1Q8R5H6 559 aa12.27□□□□□ -0.44
Scn9a-201ENSMUST00000100063 Acsbg1Q99PU5 721 aa12.27□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Map3k5O35099 1380 aa12.27□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Tom1O88746 492 aa12.27□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Abcd1P48410 736 aa12.27□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Lmbr1Q9JIT0 490 aa12.27□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Matr3Q8K310 846 aaKnown RBP12.27□□□□□ -0.45
Scn9a-201ENSMUST00000100063 TxlnbQ8VBT1 685 aa12.27□□□□□ -0.45
Scn9a-201ENSMUST00000100063 PdcQ9QW08 244 aa12.27□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Nutm1Q8BHP2 1126 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Cavin4A2AMM0 362 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 PogkQ80TC5 607 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Kcnh5Q920E3 988 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Q9D9S1 216 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Rabep1O35551 862 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 DesP31001 469 aaKnown RBP12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Rai14Q9EP71 979 aaKnown RBP12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Samd1D3YXK1 519 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Gtpbp6Q3U6U5 514 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Larp1Q6ZQ58 1072 aaKnown RBP12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Esx1O88933 382 aa12.26□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Cdk19Q8BWD8 501 aa12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 SfswapQ3USH5 945 aaKnown RBP12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Ccdc30Q8BVF4 654 aa12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Fgd6Q69ZL1 1399 aa12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Cd109Q8R422 1442 aa12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Adck5Q80V03 582 aa12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Ppm1eQ80TL0 749 aa12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Znf18Q810A1 556 aa12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Nphp1Q9QY53 687 aa12.25□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Fsd1Q7TPM6 496 aa12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Ces1aE9PYP1 563 aa12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Eif5P59325 429 aaKnown RBP12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Slc7a3P70423 618 aa12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 TxlnaQ6PAM1 554 aaKnown RBP12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Ankrd13dQ6PD24 605 aa12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Ipo4Q8VI75 1082 aa12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Psmd1Q3TXS7 953 aa12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Spty2d1Q68FG3 682 aa12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Cabp2Q9JLK4 216 aa12.24□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Nsrp1Q5NCR9 542 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Nol12Q8BG17 217 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 EprsQ8CGC7 1512 aaKnown RBP12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Sh3d21Q7TSG5 549 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Cacna2d4Q5RJF7 1116 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 ImmtQ8CAQ8 757 aaKnown RBP12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 CenpqQ9CPQ5 267 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Cdc45Q9Z1X9 566 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Fez1Q8K0X8 392 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Slc5a1Q8C3K6 665 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Phldb2Q8K1N2 1249 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Nphp3Q7TNH6 1325 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Nek4Q9Z1J2 792 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Gbp4Q61107 620 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 St5Q924W7 1134 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Homer1Q9Z2Y3 366 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Ttll12Q3UDE2 639 aa12.23□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Fermt2Q8CIB5 680 aa12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Gm14025A2AP89 1413 aa12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Pnmal2G3X9N3 661 aa12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Pde4dQ01063 747 aa12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Bms1Q6PGF5 1284 aaKnown RBP12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Fermt1P59113 677 aa12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 SkilQ60665 675 aa12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 1700010I14RikQ7TPG0 532 aa12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Tmem87aQ8BXN9 555 aa12.22□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Emilin2Q8K482 1074 aa12.21□□□□□ -0.45
Scn9a-201ENSMUST00000100063 HnrnpmQ9D0E1 729 aaKnown RBP12.21□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Exoc6bA6H5Z3 810 aa12.21□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Rbm26Q6NZN0 1012 aaKnown RBP12.21□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Ccar2Q8VDP4 922 aaKnown RBP12.21□□□□□ -0.45
Scn9a-201ENSMUST00000100063 StambpQ9CQ26 424 aa12.21□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Kdm4aQ8BW72 1064 aa12.21□□□□□ -0.45
Scn9a-201ENSMUST00000100063 Plekhh1Q80TI1 1356 aa12.21□□□□□ -0.46
Scn9a-201ENSMUST00000100063 ChgaP26339 463 aaKnown RBP12.21□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Mre11Q61216 706 aa12.21□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Iqca1Q9CUL5 857 aa12.21□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Cwc15Q9JHS9 229 aaKnown RBP12.21□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Ttc21bQ0HA38 1315 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Tmco3Q8BH01 678 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Ccdc39Q9D5Y1 937 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 SlmapQ3URD3 845 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Plekhg2Q6KAU7 1340 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 NefhP19246 1090 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 68.5 ms