RNA–Protein interactions for RNA: ENSMUST00000072551.6

Clrn1-203, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 1,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-203ENSMUST00000072551 Nlrp6Q91WS2 869 aa15.27■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Pard3Q99NH2 1333 aa15.26■□□□□ 0.03
Clrn1-203ENSMUST00000072551 ZgpatQ8VDM1 511 aa15.26■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Slc4a2P13808 1237 aaKnown RBP15.25■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Cacna1sQ02789 1880 aa15.25■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Pcgf6Q99NA9 353 aa15.25■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Anp32bQ9EST5 272 aaKnown RBP15.25■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Fnbp4Q6ZQ03 1031 aa15.24■□□□□ 0.03
Clrn1-203ENSMUST00000072551 RgmbQ7TQ33 436 aa15.24■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Nol11Q8BJW5 723 aaKnown RBP15.24■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Atf7ipQ7TT18 1306 aa15.24■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Shank2Q80Z38 1476 aa15.23■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Slx1bQ8BX32 270 aa15.23■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Eno4Q8C042 619 aa15.23■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Slit1Q80TR4 1531 aa15.23■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Rtl5Q5DTT4 599 aa15.22■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Col15a1O35206 1367 aa15.22■□□□□ 0.03
Clrn1-203ENSMUST00000072551 CrklP47941 303 aa15.22■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Eya1P97767 591 aa15.22■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Rad17Q6NXW6 688 aa15.22■□□□□ 0.03
Clrn1-203ENSMUST00000072551 GsdmaQ9EST1 446 aa15.22■□□□□ 0.03
Clrn1-203ENSMUST00000072551 MpripP97434 1024 aa15.21■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Tsen2Q6P7W5 460 aa15.21■□□□□ 0.03
Clrn1-203ENSMUST00000072551 OptnQ8K3K8 584 aa15.21■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Psrc1Q9D0P7 329 aa15.21■□□□□ 0.03
Clrn1-203ENSMUST00000072551 PalmQ9Z0P4 383 aa15.21■□□□□ 0.03
Clrn1-203ENSMUST00000072551 Ltbp1Q8CG19 1712 aa15.2■□□□□ 0.02
Clrn1-203ENSMUST00000072551 HdgfP51859 237 aaKnown RBP15.2■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Tcerg1Q8CGF7 1100 aaKnown RBP15.2■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Tnks1bp1P58871 1720 aa15.2■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Ahnak2E9PYB0 1738 aaKnown RBP15.19■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Arfgef2A2A5R2 1792 aa15.19■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Zscan21Q07231 555 aa15.19■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Mcm10Q0VBD2 885 aa15.19■□□□□ 0.02
Clrn1-203ENSMUST00000072551 U2af1Q9D883 239 aaKnown RBP15.18■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Kdm6aO70546 1401 aa15.17■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Emilin2Q8K482 1074 aa15.17■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Esx1O88933 382 aa15.16■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Ccdc129Q14B48 1034 aa15.16■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Ppp1r37Q8BKR5 712 aa15.15■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Plin1Q8CGN5 517 aa15.15■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Adgrb1Q3UHD1 1582 aa15.15■□□□□ 0.02
Clrn1-203ENSMUST00000072551 Usp19Q3UJD6 1360 aa15.14■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Nwd2Q6P5U7 1742 aa15.13■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Nup153E9Q3G8 1462 aaKnown RBP15.13■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Simc1E9Q6E9 1354 aa15.13■□□□□ 0.01
Clrn1-203ENSMUST00000072551 TnikP83510 1323 aa15.13■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Trpm3Q5F4S9 1721 aa15.12■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Gm10471E9Q1C7 252 aa15.12■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Zranb3Q6NZP1 1069 aa15.12■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Sgsm1Q8BPQ7 1093 aa15.12■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Apaf1O88879 1249 aa15.11■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Q4VA45 678 aa15.11■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Pak3Q61036 559 aa15.11■□□□□ 0.01
Clrn1-203ENSMUST00000072551 TkfcQ8VC30 578 aa15.11■□□□□ 0.01
Clrn1-203ENSMUST00000072551 InhbeO08717 350 aa15.1■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Dmrt2Q8BG36 561 aa15.1■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.09■□□□□ 0.01
Clrn1-203ENSMUST00000072551 NrdcQ8BHG1 1161 aa15.09■□□□□ 0.01
Clrn1-203ENSMUST00000072551 Sf3b2Q3UJB0 878 aaKnown RBP15.07■□□□□ 0
Clrn1-203ENSMUST00000072551 Kcna4Q61423 654 aa15.07■□□□□ 0
Clrn1-203ENSMUST00000072551 Golga2Q921M4 999 aa15.07■□□□□ 0
Clrn1-203ENSMUST00000072551 Zeb2Q9R0G7 1215 aa15.07■□□□□ 0
Clrn1-203ENSMUST00000072551 Znf541Q0GGX2 1363 aa15.07■□□□□ 0
Clrn1-203ENSMUST00000072551 Plekhd1B2RPU2 505 aa15.06■□□□□ 0
Clrn1-203ENSMUST00000072551 Map4k4P97820 1233 aaKnown RBP15.06■□□□□ 0
Clrn1-203ENSMUST00000072551 Fchsd2Q3USJ8 740 aa15.06■□□□□ 0
Clrn1-203ENSMUST00000072551 Zpr1Q62384 459 aa15.06■□□□□ 0
Clrn1-203ENSMUST00000072551 Myo5bP21271 1818 aa15.06■□□□□ 0
Clrn1-203ENSMUST00000072551 Cabp2Q9JLK4 216 aa15.06■□□□□ 0
Clrn1-203ENSMUST00000072551 Fam50bQ9WTJ8 334 aa15.06■□□□□ 0
Clrn1-203ENSMUST00000072551 Tns2Q8CGB6 1400 aa15.05■□□□□ 0
Clrn1-203ENSMUST00000072551 Ly75Q60767 1723 aa15.05■□□□□ -0
Clrn1-203ENSMUST00000072551 Aplp2Q06335 707 aa15.05■□□□□ -0
Clrn1-203ENSMUST00000072551 Uspl1Q3ULM6 1089 aa15.05■□□□□ -0
Clrn1-203ENSMUST00000072551 Snap23O09044 210 aa15.03■□□□□ -0
Clrn1-203ENSMUST00000072551 ThemisQ8BGW0 636 aa15.03■□□□□ -0
Clrn1-203ENSMUST00000072551 Pm20d1Q8C165 503 aa15.03■□□□□ -0
Clrn1-203ENSMUST00000072551 Stk31Q99MW1 1018 aa15.03■□□□□ -0
Clrn1-203ENSMUST00000072551 PappaQ8R4K8 1624 aa15.03■□□□□ -0
Clrn1-203ENSMUST00000072551 Fbln2P37889 1221 aa15.03■□□□□ -0
Clrn1-203ENSMUST00000072551 Mak16Q8BGS0 296 aaKnown RBP15.03■□□□□ -0
Clrn1-203ENSMUST00000072551 Cc2d1aQ8K1A6 943 aa15.03■□□□□ -0
Clrn1-203ENSMUST00000072551 CrbnQ8C7D2 445 aa15.02□□□□□ -0.01
Clrn1-203ENSMUST00000072551 HypkQ9CR41 129 aa15.02□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Ubr2Q6WKZ8 1755 aa15.01□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Uhrf1bp1B2KF50 1429 aa15.01□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Nkx2-3P97334 362 aa15.01□□□□□ -0.01
Clrn1-203ENSMUST00000072551 TmpoQ61033 693 aaKnown RBP15.01□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Mapk8ip3Q9ESN9 1337 aa15.01□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Nop58Q6DFW4 536 aaKnown RBP15□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Larp1Q6ZQ58 1072 aaKnown RBP15□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Aox2Q5SGK3 1345 aa15□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Amotl1Q9D4H4 968 aa15□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Dusp27Q148W8 1138 aa14.99□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Gsdma3Q5Y4Y6 464 aa14.99□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Ankrd23Q812A3 306 aa14.99□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Tjp1P39447 1745 aaKnown RBP14.98□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Kcnh4A2A5F7 1018 aa14.98□□□□□ -0.01
Clrn1-203ENSMUST00000072551 Cavin4A2AMM0 362 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms