RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 NrkQ9R0G8 1455 aa20.53■□□□□ 0.88
Usp48-201ENSMUST00000055131 Dnajc2P54103 621 aaKnown RBP20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Frmd3Q8BHD4 595 aa20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Bag1Q60739 355 aa20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Tango6Q8C3S2 1079 aa20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Gimap6Q8K349 305 aa20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Top1mtQ8R4U6 593 aa20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Gm21680A0A0G2JGR8 267 aa20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Ell2Q3UKU1 639 aa20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Cep112Q5PR68 954 aa20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Cwc15Q9JHS9 229 aaKnown RBP20.52■□□□□ 0.88
Usp48-201ENSMUST00000055131 Ptpdc1Q6NZK8 747 aa20.52■□□□□ 0.87
Usp48-201ENSMUST00000055131 Tubb6Q922F4 447 aa20.51■□□□□ 0.87
Usp48-201ENSMUST00000055131 Tspyl2Q7TQI8 677 aa20.51■□□□□ 0.87
Usp48-201ENSMUST00000055131 Rhot2Q8JZN7 620 aa20.51■□□□□ 0.87
Usp48-201ENSMUST00000055131 Chaf1aQ9QWF0 911 aa20.51■□□□□ 0.87
Usp48-201ENSMUST00000055131 Spty2d1Q68FG3 682 aa20.51■□□□□ 0.87
Usp48-201ENSMUST00000055131 Btbd11Q6GQW0 1109 aa20.51■□□□□ 0.87
Usp48-201ENSMUST00000055131 Kiaa0753Q6A000 959 aa20.5■□□□□ 0.87
Usp48-201ENSMUST00000055131 Samm50Q8BGH2 469 aa20.5■□□□□ 0.87
Usp48-201ENSMUST00000055131 Fchsd2Q3USJ8 740 aa20.5■□□□□ 0.87
Usp48-201ENSMUST00000055131 Ccdc141E9Q8Q6 1531 aa20.5■□□□□ 0.87
Usp48-201ENSMUST00000055131 Fez1Q8K0X8 392 aa20.5■□□□□ 0.87
Usp48-201ENSMUST00000055131 Themis2Q91YX0 663 aa20.5■□□□□ 0.87
Usp48-201ENSMUST00000055131 HnrnpmQ9D0E1 729 aaKnown RBP20.5■□□□□ 0.87
Usp48-201ENSMUST00000055131 PrxO55103 1391 aa20.49■□□□□ 0.87
Usp48-201ENSMUST00000055131 Gigyf1Q99MR1 1044 aaKnown RBP20.49■□□□□ 0.87
Usp48-201ENSMUST00000055131 Dctn1O08788 1281 aa20.49■□□□□ 0.87
Usp48-201ENSMUST00000055131 Cpa2Q504N0 417 aa20.49■□□□□ 0.87
Usp48-201ENSMUST00000055131 Mapk8ip1Q9WVI9 707 aa20.49■□□□□ 0.87
Usp48-201ENSMUST00000055131 Nup88Q8CEC0 753 aaKnown RBP20.49■□□□□ 0.87
Usp48-201ENSMUST00000055131 Trim34bJ3QNR8 485 aa20.48■□□□□ 0.87
Usp48-201ENSMUST00000055131 CadpsQ80TJ1 1355 aa20.48■□□□□ 0.87
Usp48-201ENSMUST00000055131 Abcd1P48410 736 aa20.48■□□□□ 0.87
Usp48-201ENSMUST00000055131 Slc13a4Q8BZ82 625 aa20.48■□□□□ 0.87
Usp48-201ENSMUST00000055131 Pms1Q8K119 917 aa20.48■□□□□ 0.87
Usp48-201ENSMUST00000055131 Cep57l1Q8VDS7 400 aa20.48■□□□□ 0.87
Usp48-201ENSMUST00000055131 Cyb5rlB1AS42 316 aa20.48■□□□□ 0.87
Usp48-201ENSMUST00000055131 CastP51125 788 aa20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 TmpoQ61033 693 aaKnown RBP20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 TkfcQ8VC30 578 aa20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 Cdc45Q9Z1X9 566 aa20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 CenphQ9QYM8 241 aa20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 Eif5P59325 429 aaKnown RBP20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 Secisbp2lQ6A098 1086 aaKnown RBP20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 Fsd2Q8BZ52 692 aa20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 BicraF8VPZ9 1578 aa20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 EprsQ8CGC7 1512 aaKnown RBP20.47■□□□□ 0.87
Usp48-201ENSMUST00000055131 Smarca5Q91ZW3 1051 aaKnown RBP20.46■□□□□ 0.87
Usp48-201ENSMUST00000055131 Lamb3Q61087 1168 aa20.46■□□□□ 0.87
Usp48-201ENSMUST00000055131 Phf14Q9D4H9 881 aa20.46■□□□□ 0.87
Usp48-201ENSMUST00000055131 Rrp9Q91WM3 475 aaKnown RBP20.46■□□□□ 0.87
Usp48-201ENSMUST00000055131 Pmfbp1Q9WVQ0 1022 aa20.46■□□□□ 0.87
Usp48-201ENSMUST00000055131 Ppip5k2Q6ZQB6 1129 aa20.46■□□□□ 0.87
Usp48-201ENSMUST00000055131 Plekhd1B2RPU2 505 aa20.46■□□□□ 0.87
Usp48-201ENSMUST00000055131 Il16O54824 1322 aa20.46■□□□□ 0.87
Usp48-201ENSMUST00000055131 ItpripQ3TNL8 555 aa20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Stim1P70302 685 aa20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Kif20aP97329 887 aa20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Ccdc102aQ3TMW1 549 aa20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Brf1Q8CFK2 676 aa20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Flad1Q8R123 492 aa20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Pip4k2aO70172 405 aa20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Larp1Q6ZQ58 1072 aaKnown RBP20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Zscan20B2KFW1 1030 aa20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 IbtkQ6ZPR6 1352 aaKnown RBP20.45■□□□□ 0.86
Usp48-201ENSMUST00000055131 Syce3B5KM66 88 aa20.44■□□□□ 0.86
Usp48-201ENSMUST00000055131 Irgm2A0A140LIF8 407 aa20.44■□□□□ 0.86
Usp48-201ENSMUST00000055131 Med4Q9CQA5 270 aa20.44■□□□□ 0.86
Usp48-201ENSMUST00000055131 Cfap58B2RW38 873 aa20.43■□□□□ 0.86
Usp48-201ENSMUST00000055131 Ppp6r1Q7TSI3 856 aa20.43■□□□□ 0.86
Usp48-201ENSMUST00000055131 Gsdma2Q32M21 443 aa20.43■□□□□ 0.86
Usp48-201ENSMUST00000055131 Trim34aQ99PP6 485 aa20.43■□□□□ 0.86
Usp48-201ENSMUST00000055131 Mroh2bQ7M6Y6 1581 aa20.43■□□□□ 0.86
Usp48-201ENSMUST00000055131 Ccar2Q8VDP4 922 aaKnown RBP20.43■□□□□ 0.86
Usp48-201ENSMUST00000055131 Fam13aQ8BGI4 693 aa20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 4930572O03RikQ8C5Y0 211 aa20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 Neo1P97798 1493 aa20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 Paxip1Q6NZQ4 1056 aa20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 Rrs1Q9CYH6 365 aaKnown RBP20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 Cdkl5Q3UTQ8 938 aa20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 Krt84Q99M73 603 aa20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 L3mbtl2P59178 703 aa20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 Podxl2Q8CAE9 603 aa20.42■□□□□ 0.86
Usp48-201ENSMUST00000055131 Tiam1Q60610 1591 aa20.41■□□□□ 0.86
Usp48-201ENSMUST00000055131 Nat10Q8K224 1024 aaKnown RBP20.41■□□□□ 0.86
Usp48-201ENSMUST00000055131 Rufy2Q8R4C2 606 aa20.41■□□□□ 0.86
Usp48-201ENSMUST00000055131 Atxn3Q9CVD2 355 aa20.41■□□□□ 0.86
Usp48-201ENSMUST00000055131 Rapgef4Q9EQZ6 1011 aa20.41■□□□□ 0.86
Usp48-201ENSMUST00000055131 Pof1bQ8K4L4 587 aa20.41■□□□□ 0.86
Usp48-201ENSMUST00000055131 Cyp26c1B2RXA7 518 aa20.41■□□□□ 0.86
Usp48-201ENSMUST00000055131 Trim30cD3YVI9 513 aa20.4■□□□□ 0.86
Usp48-201ENSMUST00000055131 Gnl2Q99LH1 728 aaKnown RBP20.4■□□□□ 0.86
Usp48-201ENSMUST00000055131 AcrbpQ3V140 540 aa20.4■□□□□ 0.86
Usp48-201ENSMUST00000055131 Dhx8A2A4P0 1244 aaKnown RBP20.4■□□□□ 0.86
Usp48-201ENSMUST00000055131 Fkbp5Q64378 456 aa20.4■□□□□ 0.86
Usp48-201ENSMUST00000055131 Cfap69Q8BH53 942 aa20.4■□□□□ 0.86
Usp48-201ENSMUST00000055131 Fam50bQ9WTJ8 334 aa20.39■□□□□ 0.86
Usp48-201ENSMUST00000055131 Ankib1Q6ZPS6 1085 aa20.39■□□□□ 0.85
Usp48-201ENSMUST00000055131 Iqca1Q9CUL5 857 aa20.39■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms