RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Astn2Q80Z10 1352 aa17.55■□□□□ 0.4
Lime1-201ENSMUST00000048077 Med1Q925J9 1575 aa17.54■□□□□ 0.4
Lime1-201ENSMUST00000048077 Arap3Q8R5G7 1538 aa17.54■□□□□ 0.4
Lime1-201ENSMUST00000048077 Ankrd44B2RXR6 993 aa17.54■□□□□ 0.4
Lime1-201ENSMUST00000048077 Brd1E9PZ26 1189 aaKnown RBP17.54■□□□□ 0.4
Lime1-201ENSMUST00000048077 Cetn4Q8K4K1 168 aa17.54■□□□□ 0.4
Lime1-201ENSMUST00000048077 Kif18aQ91WD7 886 aa17.54■□□□□ 0.4
Lime1-201ENSMUST00000048077 Kif20bQ80WE4 1774 aaKnown RBP17.54■□□□□ 0.4
Lime1-201ENSMUST00000048077 Txndc2Q6P902 515 aa17.53■□□□□ 0.4
Lime1-201ENSMUST00000048077 4933416C03RikQ3V063 378 aa17.53■□□□□ 0.4
Lime1-201ENSMUST00000048077 Tnpo1Q8BFY9 898 aaKnown RBP17.53■□□□□ 0.4
Lime1-201ENSMUST00000048077 Rims2Q9EQZ7 1530 aa17.53■□□□□ 0.4
Lime1-201ENSMUST00000048077 N4bp2F8VQG7 1678 aaKnown RBP17.52■□□□□ 0.4
Lime1-201ENSMUST00000048077 PzpQ61838 1495 aa17.52■□□□□ 0.4
Lime1-201ENSMUST00000048077 NalcnQ8BXR5 1738 aa17.52■□□□□ 0.4
Lime1-201ENSMUST00000048077 Gm6268A2A3U9 297 aa17.52■□□□□ 0.4
Lime1-201ENSMUST00000048077 Pnmal2G3X9N3 661 aa17.52■□□□□ 0.4
Lime1-201ENSMUST00000048077 Znf330Q922H9 316 aa17.51■□□□□ 0.39
Lime1-201ENSMUST00000048077 Zfp777B9EKF4 885 aa17.51■□□□□ 0.39
Lime1-201ENSMUST00000048077 LifrP42703 1092 aa17.51■□□□□ 0.39
Lime1-201ENSMUST00000048077 Irx3P81067 507 aa17.5■□□□□ 0.39
Lime1-201ENSMUST00000048077 CemipQ8BI06 1361 aa17.5■□□□□ 0.39
Lime1-201ENSMUST00000048077 MarsQ68FL6 902 aaKnown RBP17.49■□□□□ 0.39
Lime1-201ENSMUST00000048077 Tmco5bQ80X59 307 aa17.49■□□□□ 0.39
Lime1-201ENSMUST00000048077 Adamtsl3G3UXC7 1706 aa17.47■□□□□ 0.39
Lime1-201ENSMUST00000048077 Mfap1aC0HKD8 439 aaKnown RBP17.47■□□□□ 0.39
Lime1-201ENSMUST00000048077 Mfap1bC0HKD9 439 aaKnown RBP17.47■□□□□ 0.39
Lime1-201ENSMUST00000048077 Aldh1l2Q8K009 923 aa17.47■□□□□ 0.39
Lime1-201ENSMUST00000048077 Rreb1Q3UH06 1700 aaKnown RBP17.47■□□□□ 0.39
Lime1-201ENSMUST00000048077 Nectin2P32507 530 aa17.46■□□□□ 0.39
Lime1-201ENSMUST00000048077 Cgnl1Q6AW69 1298 aa17.46■□□□□ 0.39
Lime1-201ENSMUST00000048077 Usp16Q99LG0 825 aa17.46■□□□□ 0.39
Lime1-201ENSMUST00000048077 Stk31Q99MW1 1018 aa17.46■□□□□ 0.39
Lime1-201ENSMUST00000048077 Cabp2Q9JLK4 216 aa17.46■□□□□ 0.39
Lime1-201ENSMUST00000048077 IghaA0A0A6YXW6 389 aa17.46■□□□□ 0.39
Lime1-201ENSMUST00000048077 Znf316Q6PGE4 1016 aa17.46■□□□□ 0.39
Lime1-201ENSMUST00000048077 Kif2cQ922S8 721 aa17.46■□□□□ 0.39
Lime1-201ENSMUST00000048077 Ncapd2Q8K2Z4 1392 aa17.46■□□□□ 0.38
Lime1-201ENSMUST00000048077 Slit2Q9R1B9 1521 aa17.46■□□□□ 0.38
Lime1-201ENSMUST00000048077 Nutm1Q8BHP2 1126 aa17.45■□□□□ 0.38
Lime1-201ENSMUST00000048077 Cog6Q8R3I3 657 aa17.45■□□□□ 0.38
Lime1-201ENSMUST00000048077 4930407I10RikD3Z5T8 1512 aa17.44■□□□□ 0.38
Lime1-201ENSMUST00000048077 Eif4a2P10630 407 aa17.44■□□□□ 0.38
Lime1-201ENSMUST00000048077 HnrnpuQ8VEK3 800 aaKnown RBP17.44■□□□□ 0.38
Lime1-201ENSMUST00000048077 Cdk12Q14AX6 1484 aaKnown RBP17.44■□□□□ 0.38
Lime1-201ENSMUST00000048077 Adgrb1Q3UHD1 1582 aa17.43■□□□□ 0.38
Lime1-201ENSMUST00000048077 Mon2Q80TL7 1715 aa17.43■□□□□ 0.38
Lime1-201ENSMUST00000048077 Wdr63B2RY71 923 aa17.42■□□□□ 0.38
Lime1-201ENSMUST00000048077 Gm10093D3YYI8 482 aa17.42■□□□□ 0.38
Lime1-201ENSMUST00000048077 Hdac1O09106 482 aaKnown RBP17.42■□□□□ 0.38
Lime1-201ENSMUST00000048077 Aldh8a1Q8BH00 487 aa17.42■□□□□ 0.38
Lime1-201ENSMUST00000048077 Antxr1Q9CZ52 562 aa17.42■□□□□ 0.38
Lime1-201ENSMUST00000048077 Ubr1O70481 1757 aa17.42■□□□□ 0.38
Lime1-201ENSMUST00000048077 Lmtk3Q5XJV6 1424 aa17.42■□□□□ 0.38
Lime1-201ENSMUST00000048077 Terf2O35144 541 aa17.41■□□□□ 0.38
Lime1-201ENSMUST00000048077 Mcm10Q0VBD2 885 aa17.41■□□□□ 0.38
Lime1-201ENSMUST00000048077 Trim27Q62158 513 aa17.41■□□□□ 0.38
Lime1-201ENSMUST00000048077 HnrnpmQ9D0E1 729 aaKnown RBP17.41■□□□□ 0.38
Lime1-201ENSMUST00000048077 D430041D05RikF6ZGR6 1678 aa17.41■□□□□ 0.38
Lime1-201ENSMUST00000048077 Tet3Q8BG87 1668 aa17.41■□□□□ 0.38
Lime1-201ENSMUST00000048077 Q3UJC8 639 aa17.4■□□□□ 0.38
Lime1-201ENSMUST00000048077 CarsQ9ER72 831 aaKnown RBP17.4■□□□□ 0.38
Lime1-201ENSMUST00000048077 Scn7aB1AYL1 1681 aa17.4■□□□□ 0.38
Lime1-201ENSMUST00000048077 Rab11fip3Q8CHD8 1047 aa17.4■□□□□ 0.38
Lime1-201ENSMUST00000048077 Col16a1Q8BLX7 1580 aa17.4■□□□□ 0.38
Lime1-201ENSMUST00000048077 Ptpn23Q6PB44 1692 aa17.4■□□□□ 0.38
Lime1-201ENSMUST00000048077 Mcm2P97310 904 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Gtf3c3Q3TMP1 882 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Scaf1Q5U4C3 1256 aaKnown RBP17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Ric3Q8BPM6 367 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 4933402E13RikQ9D4D2 429 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Pik3c2aQ61194 1686 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Kif24Q6NWW5 1356 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Map2P20357 1828 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Rangap1P46061 589 aaKnown RBP17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Chl1P70232 1209 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Rad17Q6NXW6 688 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Gcc1Q9D4H2 778 aa17.39■□□□□ 0.37
Lime1-201ENSMUST00000048077 Abcc10Q8R4P9 1501 aa17.37■□□□□ 0.37
Lime1-201ENSMUST00000048077 Trpm3Q5F4S9 1721 aa17.37■□□□□ 0.37
Lime1-201ENSMUST00000048077 Catsper2A2ARP9 588 aa17.37■□□□□ 0.37
Lime1-201ENSMUST00000048077 Eif4g2Q62448 906 aaKnown RBP17.37■□□□□ 0.37
Lime1-201ENSMUST00000048077 U2surpQ6NV83 1029 aaKnown RBP17.37■□□□□ 0.37
Lime1-201ENSMUST00000048077 Tm6sf1P58749 370 aa17.37■□□□□ 0.37
Lime1-201ENSMUST00000048077 C5P06684 1680 aa17.36■□□□□ 0.37
Lime1-201ENSMUST00000048077 Als2Q920R0 1651 aa17.36■□□□□ 0.37
Lime1-201ENSMUST00000048077 Anapc15-psA0A140T8L6 141 aa17.35■□□□□ 0.37
Lime1-201ENSMUST00000048077 ArxO35085 564 aa17.35■□□□□ 0.37
Lime1-201ENSMUST00000048077 Frmpd2A0A140LI67 1392 aa17.35■□□□□ 0.37
Lime1-201ENSMUST00000048077 MpripP97434 1024 aa17.35■□□□□ 0.37
Lime1-201ENSMUST00000048077 Phf23Q8BSN5 401 aa17.35■□□□□ 0.37
Lime1-201ENSMUST00000048077 Tbc1d9Q3UYK3 1264 aa17.34■□□□□ 0.37
Lime1-201ENSMUST00000048077 TmpoQ61033 693 aaKnown RBP17.34■□□□□ 0.37
Lime1-201ENSMUST00000048077 CenppQ9CZ92 286 aa17.34■□□□□ 0.37
Lime1-201ENSMUST00000048077 Kdm4cQ8VCD7 1054 aa17.33■□□□□ 0.37
Lime1-201ENSMUST00000048077 Klhdc4Q921I2 584 aa17.33■□□□□ 0.37
Lime1-201ENSMUST00000048077 Igsf1Q7TQA1 1317 aa17.32■□□□□ 0.36
Lime1-201ENSMUST00000048077 Parp14Q2EMV9 1817 aa17.31■□□□□ 0.36
Lime1-201ENSMUST00000048077 Camta1A2A891 1682 aa17.31■□□□□ 0.36
Lime1-201ENSMUST00000048077 Rsph3aQ3UFY4 516 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 68.6 ms